Larus michahellis (yellow-legged gull): 141746613
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Entry
141746613 CDS
T11135
Symbol
RPA1
Name
(RefSeq) replication protein A 70 kDa DNA-binding subunit
KO
K07466
replication factor A1
Organism
lmic Larus michahellis (yellow-legged gull)
Pathway
lmic03030
DNA replication
lmic03420
Nucleotide excision repair
lmic03430
Mismatch repair
lmic03440
Homologous recombination
lmic03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
lmic00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
141746613 (RPA1)
03420 Nucleotide excision repair
141746613 (RPA1)
03430 Mismatch repair
141746613 (RPA1)
03440 Homologous recombination
141746613 (RPA1)
03460 Fanconi anemia pathway
141746613 (RPA1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lmic03000
]
141746613 (RPA1)
03032 DNA replication proteins [BR:
lmic03032
]
141746613 (RPA1)
03400 DNA repair and recombination proteins [BR:
lmic03400
]
141746613 (RPA1)
Transcription factors [BR:
lmic03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
141746613 (RPA1)
DNA replication proteins [BR:
lmic03032
]
Eukaryotic type
DNA Replication Elongation Factors
RPA (replication protein A)
141746613 (RPA1)
DNA repair and recombination proteins [BR:
lmic03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
RPA (replication factor A)
141746613 (RPA1)
MMR (mismatch excision repair)
141746613 (RPA1)
DSBR (double strand breaks repair)
HR (homologous recombination)
141746613 (RPA1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rep_fac-A_C
REPA_OB_2
Rep-A_N
tRNA_anti-codon
DUF223
RADX
CATSPERD-E_C
MAML1_3_TAD2
DUF4939
Motif
Other DBs
NCBI-GeneID:
141746613
NCBI-ProteinID:
XP_074451561
LinkDB
All DBs
Position
7:3908698..3932177
Genome browser
AA seq
613 aa
AA seq
DB search
MSVQLSEGAIAAIMQGECVSKPVLQVINTRAIATGNGPPRYRVLMSDGVNTLSSFMLATQ
LNSLVEEERLSAQCICQVNRFIVNSLKDGRRVVILMDLNVLKTADKVGGNIGNPVPYNEG
QGQQRSSAPAANPAPSKPQQQNGNLSVAGPAAPKYHAPSNQFGKASALSAVKTPGGSQAK
VVPIASLNPYQSKWTICARVTQKGQIRQWSNSRGEGKLFSIELVDESGEIRATAFNDQAD
KFFPLIELNKVYYFTKGNLKTANKQYTAVKNDYEITFTNETSVVPCDDAQHLPSVQFEFV
SISDLENKPKDSIVDVIGICKSYEDVTKIIVKANNREVSKRNVHLMDTSGKLVTATLWGH
EAEQFDGSRQPVIAIKGARVSDFGGRSLSVLSSSTVVINPDSPEAFKLRGWFDSEGQLLE
CASISDVRGGPASGMNTNWKTLFEAKSENLGQGDKADYFSCVATVVHLRKENCMYQACPS
QDCNKKVIDQQNGLYRCEKCDREFPNFKYRMMLLVTIADSLEYQWLTCFQETAELILGQN
AAFLGELKEKNEQAFEEVFQNANFNTYEFKIRVKQETYNDESRIKATAVDVKPVNYRDYS
KRLIASIRRNAQL
NT seq
1842 nt
NT seq
+upstream
nt +downstream
nt
atgagcgtgcagctgagtgagggcgccatcgcggcgataatgcagggggagtgcgtctcc
aagcccgtgctgcaggtcatcaatacacgggctattgctacaggaaatgggccaccccgt
taccgagtgttgatgagtgatggagttaacacgctctcctcattcatgttggcaacgcag
ctgaactctctggtggaagaggaacgcttatcagcccagtgtatttgccaggttaacaga
ttcattgtcaacagcctgaaagatggaaggagagtggttatactgatggatttaaatgtt
ctgaaaactgctgataaggttggtgggaatattggcaatccagtgccatacaatgaaggg
caagggcagcaacgttcttcagctccagctgcaaatccagcacccagcaaaccgcagcaa
caaaatggcaatttgtcagtagcaggtcctgctgctccgaagtaccatgctccctcaaac
cagttcggtaaagcgagtgctctgagtgcggtgaagacaccagggggatcgcaggccaaa
gtagtgccgattgccagcctgaacccataccaatctaagtggaccatttgtgctcgtgtt
acccaaaaaggccagatccgccagtggagcaactcccgtggtgaaggaaagctcttttct
atagagctagttgatgaaagtggtgagattagagcgactgcattcaatgatcaagcagac
aagttctttccactcattgaattgaacaaggtatattattttaccaaaggcaatttgaag
actgctaacaagcaatatacagctgttaagaatgactatgagattacattcactaatgag
acttcagttgtgccctgtgatgatgcccagcatcttccatctgttcagtttgagtttgta
tccatctctgacttggagaacaagcccaaagactcaattgttgatgtaattggaatttgt
aagagctatgaagatgtcactaaaattatagtgaaagctaacaatagggaggtatcgaag
aggaacgtgcatctgatggatacatcagggaaactggtgacagctacgctatggggacac
gaggcagaacaatttgatggttctagacaacctgtgatagccatcaaaggagcccgagtc
tctgattttggtggtagaagcctgtctgtcctgtcctcaagtacagttgtcatcaaccct
gatagcccagaggcttttaagctccgaggatggtttgactccgagggccagcttctggaa
tgtgcctcaatctccgatgtgaggggtgggccggcgtctgggatgaataccaattggaaa
actttgtttgaagccaaatctgagaacttgggacaaggagataaggcggattattttagc
tgtgtggccacagtagtacatctgcgcaaagagaactgtatgtaccaggcatgtccctct
caggattgcaataagaaagtgatagaccaacaaaatgggctgtatcgttgtgagaagtgt
gatcgtgaattccccaacttcaagtaccgcatgatgcttctggtgaccattgcagacagt
ctagagtatcagtggctgacatgtttccaagagacagcagaactcattcttgggcaaaac
gcagctttcctgggagaactgaaggaaaagaacgagcaggcatttgaagaagtgttccaa
aatgcaaacttcaacacgtacgagttcaagatccgagtaaaacaggagacttacaacgat
gaatcccgtattaaggctacagcagtggacgtcaaacctgtgaactacagagactacagc
aagaggttgatcgcaagcatcaggagaaatgctcagctatag
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