Larus michahellis (yellow-legged gull): 141746829
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Entry
141746829 CDS
T11135
Symbol
SCARF1
Name
(RefSeq) scavenger receptor class F member 1
KO
K24318
scavenger receptor class F member 1
Organism
lmic Larus michahellis (yellow-legged gull)
Pathway
lmic04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
lmic00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
141746829 (SCARF1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lmic04131
]
141746829 (SCARF1)
Membrane trafficking [BR:
lmic04131
]
Endocytosis
Phagocytosis
Scavenger receptors
141746829 (SCARF1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EGF_laminin
EGF_TEN
EGF_2
EGF_PEAR1L
EGF_Teneurin
Motif
Other DBs
NCBI-GeneID:
141746829
NCBI-ProteinID:
XP_074452135
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All DBs
Position
7:complement(3806963..3813757)
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AA seq
873 aa
AA seq
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MGSARPILCLQLWLWVQSSAQELDPDGRNVCRLPAGPACCPGWKQEGRECTAALCEGEDA
CREDEVCVRPGVCLCKPGFFGADCSSRCPEQYWGPDCKRSCPCHPNGRCDPASGSCTCDP
NHWGELCQLPCHCGPHGRCDPLTGACHCEPGWWAPTCKKQCQCNPAGSHCDPLTGHCRCL
LGWWGRRCSFRCSCNLSPCAQETGKCECKAGFWGPACQRHCDCLHGSCSPLSGHCSCSPG
YQGRSCRDPCPAGKYGSQCVHSCGSCKRSQPCSPVDGFCLACQPGWNGTLCKEPCAPGFY
GEDCLQPCPRCRRGEICDPETGSCPHCEPGWTGPSCNSSCPAGTFGDGCRFLCPECVAGS
CDPVSGACICQAGYWGDSCNDTCLEGYFGVNCSSLCQCSRGTCHPVRGDCVLSLKDHGAL
AAAILVPLLLLLLCVACCCCGAGPADARDRAAVPDDDVVARMKHHVRGVLANLSAMMPCF
SLGGYKLPKVTVSHHDTEIPFNPSFIEPPSAAWVSDSSFSSSFDTDNEGPEYSVPPREGI
PLLGGAELQDGASPPAEALPDPSAFDSEDVSQPFTIPRTSSIAKAKRPSVSFAEGTKFGA
VETPSPGRKPKTPWGPSKLSPPPGDAATEPPTERPASDCYESPEPLSKAEESHRPSPRAT
PGGRRRVVSGTRHVAQRVEALEAAAKSGSWEAKGKDPNVTTIYMMVGTAGQDPKAEGGGE
GPVQAVLKRLGSLQKGKWGAKEEPKVRRSVEAIQKPPRRALAQGRDSVNSCKQRESVPGP
PAEPSPGKHQHLPGKRRSFLFASPSLKSTGAQDGAVDAAGATEKGKSPELVLSLETKGQA
LPEEEPKYENVTNSSADLPPGSAEEPPATPAAT
NT seq
2622 nt
NT seq
+upstream
nt +downstream
nt
atggggagcgcccggcccatcctctgcctccagctgtggctgtgggtgcagagctctgcc
caggagctcgaccccgatggcaggaacgtctgcaggctccccgccggcccggcgtgctgc
cccggctggaagcaggaagggcgggagtgcacggctgctctctgcgagggggaggatgcc
tgcagggaggacgaggtgtgtgtgagacccggggtttgcctctgcaaacccggcttcttc
ggagcagactgcagttcccgctgtcccgagcagtactggggtcccgactgcaagcggagc
tgcccctgccaccccaacgggcgctgcgacccggcgagcggcagctgcacctgcgacccc
aaccactggggagagctctgccagctcccctgccactgcggcccccacggccgctgcgac
cccctcaccggcgcctgccactgcgagccgggctggtgggcccccacctgcaagaagcaa
tgtcagtgcaaccccgccggctcccactgcgaccccctcaccggccactgccgctgcctg
ctgggctggtggggcaggaggtgcagcttcagatgctcctgcaacctctcgccctgcgcc
caggagacgggcaagtgcgaatgcaaggctgggttttgggggccggcgtgccagcggcac
tgcgactgcttgcacggctcctgcagccccctcagtggccactgcagctgcagccccggc
taccagggcaggagctgcagggacccctgtccggcggggaaatacgggtctcagtgcgtg
cacagctgcgggagctgcaagcgcagccagccctgctcgcccgtggatggcttctgcctg
gcctgccagcccggctggaacgggaccctctgcaaggagccctgcgcgcccggcttctac
ggcgaggactgcctccagccctgtccccgctgccggcgcggggagatctgcgacccagag
accgggtcctgcccgcactgtgagcccggttggacgggacccagctgcaacagctcctgc
cccgcgggcaccttcggcgatgggtgccggttcctctgccccgagtgcgttgcggggagc
tgcgaccccgtgtcaggagcttgcatctgccaggccggctactggggagacagctgcaac
gacacctgtctggagggatattttggagtgaactgttcctcgctctgccagtgctcccgg
gggacctgccaccccgtgcggggtgactgtgtgttgagtcttaaagaccacggagccctc
gcagccgccatcctcgttcctctcctgctgctgctgctctgcgtcgcctgctgttgctgc
ggagccggcccagcagatgctagagacagggcggccgtgccagatgacgatgtggtggcc
aggatgaagcaccacgtgcggggggtgctggcgaacctcagcgctatgatgccttgcttt
tccctgggtggctacaaacttcccaaagtcacagtttcccaccacgacacggaaatcccc
ttcaaccccagcttcatcgagccgccatcggctgcgtgggtttcagacagctccttctcc
tcctccttcgacaccgacaacgagggacccgagtactccgtccctcccagagaaggcatc
ccgctgctggggggggctgaactgcaggatggtgcatccccccctgctgaggcgctccca
gacccatctgccttcgactctgaggacgtctcgcagcccttcaccatcccgcgcacctcc
agcatcgccaaggccaagcgtccctctgtgtcctttgccgaggggacaaaatttggggcg
gtggagacccccagccctgggcggaagcccaagaccccatggggcccatccaagctgtcc
ccgccgccgggggatgcggcaactgagccccccactgaacgaccagccagcgattgctac
gagagccccgagcccctcagcaaggcggaggaaagccaccggccatcaccccgggccacc
ccggggggacgccggcgggtggtctccggcaccaggcacgtggcccagagagtggaggcg
cttgaagcggctgcaaaatccggcagctgggaggcgaaggggaaggaccccaacgtcacc
accatctacatgatggtgggaacggccgggcaggaccccaaggcggaggggggtggcgag
ggaccggtccaggccgtgctcaagcgtctgggcagcttgcagaagggcaagtggggtgca
aaggaggagcccaaggtgaggaggagcgtcgaggccatccagaaaccgccccgccgggcc
ctggcgcagggcagagactcggtgaatagctgcaagcagagggagagtgtcccagggcct
cccgccgagccatcccctggcaagcaccagcatctccccgggaagagacgatccttcctt
ttcgcatccccctcgctgaaaagcaccggggcacaggatggggccgtcgatgctgcaggt
gccacggagaagggcaaaagcccagagttagtcctcagcctcgaaacgaagggacaggct
ctcccagaggaagagccgaaatacgagaacgtgaccaacagcagtgccgatttgccccct
ggctctgctgaggagccaccggccacccctgcagccacctga
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