Larus michahellis (yellow-legged gull): 141747554
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Entry
141747554 CDS
T11135
Symbol
TNR
Name
(RefSeq) tenascin-R isoform X1
KO
K06252
tenascin
Organism
lmic Larus michahellis (yellow-legged gull)
Pathway
lmic04510
Focal adhesion
lmic04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
lmic00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
141747554 (TNR)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
141747554 (TNR)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
lmic00536
]
141747554 (TNR)
Glycosaminoglycan binding proteins [BR:
lmic00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
141747554 (TNR)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
141747554
NCBI-ProteinID:
XP_074454096
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Position
8:complement(22540529..22618958)
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AA seq
1355 aa
AA seq
DB search
MGTDNENPVLRNVLISFSLLLLGAILKPFECRLEVTTEPVKRAAVDEKGGLANCSPSIKE
QPMVFHHIYNINIPVDSCCSSMFKSSAEEVSSEDDQLAEYEEQTSDSESQVTFTHRINLP
KQACKCSTSFPPLQELLSRIEILEREVSILRDQCNSNCCQENAATGQPDYTLQCSGHGNF
SLESCSCVCMEGWAGSNCSEPHCPQGCSSRGVCLEGQCICDNDYGGEDCSQLRCPSGCGS
HGLCVDGECVCEEGFAGEDCSHLRCPRDCSGKGHCVNGTCICWEGYTGEDCGWLHCPNAC
SSRGVCQDGLCICKDGYEGQDCSAVSPPKNLRVTGISDNSIELTWDSPGAATEYIVSYQP
AGPGGTHLQQRVPGDCSSITITELEPGVAYNISIYAVISDVLSIPVTSKVMTNLATPQGL
KFKTITETTAEVQWEPFSFPFDGWEISFIPKNNEGGVIAQLPSTITTFNQTGLKPGEEYT
VTVVALKEQARSPPTSDSVSTLIDGPTQILVRDVSDTVAFVEWTPPRAKVDTILLKYGLA
DGEGGRTTFRLQPPLSQYSLQALRPGARYHLAVSALRGVNESQPALAQFTTEIDAPKNLR
VGSRMPTSLELAWDNSEAEAHSYRVVYSTLAGEHYHEVLVPRDTGPTTRATLTDLVPGTE
YGIGISAVMDSQQSVPATMNARTELDSPRDLLVTASTETSISLAWTKAMGPIDHYRITFT
PASGMASEVMVPWDKSQLTLSELEPGTEYTISIIAERGRQQSLEATVDAFTGVRPITQLH
FSQLTSSSVNVTWSDPSPPADRLILTYSPRDEEEAQQLMLDGTRRHVSLTSLQPSTEYLV
SLVAMHGSVSSEPVVGSITTGIDGPKDLRVGNITQESMIVYWSPPITTFDHYRISYRTTE
GRTDSTTITSDATEYALRRLQPATKYEIRVKSVRGREESEVASITVYTAMDAPLGVTATN
VTPTEALLQWNSPLSEVESYILVLTCRTVAGETILVDGVNQEYLLTNLLPSTTYTVSMYA
TNGPITSQTISTNFTTLLDPPTNLTASEVTRRSALLSWVPPLGETENYIMTYRSTDGSRK
ELIVDAEDTWIRLEGLSETTEYTVDLQAAQNIMRSGFISTTFTTGGRVFANPQDCAQHLM
NGDTLSGIYTISINGDLSQRVQVYCDMTTDGGGWIVFQRRQNGLTDFFRKWADYRVGFGN
LEDEFWLGLDNIHKITSQGRYELRIDMRDGQEAAYAYYDKFSIGDSRSLYKLRIGDYNGT
SGDSLTYHQGRPFSTKDRDNDVAVTNCAMSYKGAWWYKNCHRTNLNGKYGESRHSQGINW
YHWKGHEFSIPFVEMKMRPYNHRNISGRKRRSLQL
NT seq
4068 nt
NT seq
+upstream
nt +downstream
nt
atggggactgacaatgaaaacccagtcctgaggaacgtgctcattagcttcagcttgctt
ctgctgggtgccatcctcaagccttttgagtgccggctggaggtgacaacagagccagtc
aagagggcagcagtggatgagaagggtggccttgccaactgcagcccatccatcaaagag
cagcccatggtcttccaccacatctacaacatcaacatccccgtggacagctgctgctcg
tccatgttcaagtcttcagcagaggaggtgagttcagaagatgaccagctggcggagtac
gaggagcagacctccgacagtgagagccaggtcaccttcacccacaggataaacttgccc
aagcaggcctgcaagtgctccacctccttcccacccctgcaggagctgctgagcaggatt
gagatactggagagagaggtatccatactccgggaccagtgcaactccaattgctgccaa
gaaaatgcagccacagggcagccggattacaccctgcagtgcagcggccacgggaacttc
agcctggagtcatgcagctgtgtgtgcatggagggctgggcaggcagcaactgctctgag
ccccactgtccccagggctgctccagccgcggcgtctgcctggagggccagtgcatctgc
gacaatgactacgggggcgaggactgctcccagctccgctgcccctctggctgcggctcc
catgggctctgcgtggatggcgagtgcgtctgcgaggagggttttgctggggaggattgt
tcccacctgcgatgtccccgtgactgctcagggaagggccactgcgtcaacggcacgtgc
atctgctgggagggctacaccggggaggactgtgggtggctgcactgccccaatgcctgc
agcagccgtggggtctgccaggatggtctctgcatctgcaaggatggctacgaagggcag
gactgctcagcagtgtctcctcccaaaaacctgcgagtgacagggatcagcgacaactcc
attgagctgacatgggacagccccggagcagccactgagtacatcgtctcgtaccaaccg
gcggggccagggggcacccacctccagcagcgggtgcctggggactgcagcagcatcacc
atcacggagctggagccaggtgttgcctacaacatcagcatctatgcagtcatcagcgac
gtcttgagcatccctgttacctccaaggtgatgaccaacctcgccacaccgcaggggctg
aagttcaagaccatcacagagacgacagcagaggtgcagtgggagcccttctccttcccc
ttcgacggctgggagatcagctttatccccaagaataatgaaggcggcgtgattgcccag
ctccccagcaccatcaccaccttcaaccagacggggctgaagccaggggaagaatacacc
gtcactgtggtggccctgaaggaacaagccaggagccctcccacatctgacagcgtttca
accctcattgatggaccgacgcagatcctggtgcgggacgtctctgacacagtggccttc
gtggagtggacaccaccgcgtgccaaggtggacaccatcctgctgaagtacgggctggcg
gatggggagggggggaggaccaccttccgcctgcagccccccctcagccagtactccctg
caggcccttcgccctggcgcccgctaccacctcgccgtcagtgccctccggggtgtcaac
gagagccagccagccctcgcccagttcaccacagagattgatgcccccaagaacctacgg
gtgggctcgcggatgcccaccagccttgagctcgcctgggacaatagtgaggccgaggca
cacagctacagggtggtctacagcaccctggccggagagcactaccacgaagtcctggtg
ccacgggacactggtcccaccacccgggccactctcacagatctggtgccagggacagag
tacggcatcgggatttcagccgtgatggacagccagcagagcgtgccggcaaccatgaat
gccagaactgagcttgacagcccccgggacctcctggtgacagcctccacagagacgtcc
atctcactggcctggaccaaagccatgggtcccattgaccactatcgcatcaccttcacc
cctgcctcgggaatggcctcagaagtgatggtgccctgggacaagtcacagctcaccttg
tcggagctggagcctgggacagagtacaccatctccatcattgctgagaggggacgccag
caaagcctggaggccactgtggatgccttcacaggggtccggcccatcacacagctccac
ttctcccagctgacatcctccagtgtgaatgtcacgtggagtgatccatccccaccagca
gaccgcctcatcctcacctacagcccccgggatgaggaggaggcacagcagctcatgctt
gacggcacccgcaggcatgtcagcttgacaagcttgcagccatccaccgagtacctggtg
tcactggtggccatgcatggcagtgtcagctctgagcctgttgtgggctccatcacaaca
gggattgatgggccaaaggacctcagggtgggcaacatcactcaggagtccatgatcgtc
tactggagccctcccatcaccaccttcgaccactacagaatatcctaccgcaccaccgaa
gggaggacagacagcaccaccatcaccagtgatgccaccgagtatgccctccgccgcctg
cagcccgccaccaagtatgagatcagggtgaagagcgtgcggggccgggaggagagcgag
gtggcctccatcactgtgtacacagccatggatgcccccttgggggtcacagccaccaac
gtcactcccactgaggcactgctgcagtggaactcaccgctgtcagaagtggagagctac
atccttgtcctcacctgccgcacagttgcaggagaaacaattcttgtggatggagtcaac
caggagtacctgttgaccaacctcctgcccagtaccacctacacagtttctatgtatgcc
accaatgggcctatcaccagccagaccatcagcaccaactttaccactcttttggatcct
ccaacaaatctgacagccagcgaagtcactcgacggagtgccctgctctcctgggtgcct
cccctgggagagactgagaactacatcatgacatatagatccaccgatggcagccggaag
gagctgattgtggatgctgaggacacgtggatccgcctggagggtctttctgagaccaca
gagtacaccgtggacttgcaagctgcccaaaacatcatgcggagtggcttcatctccacc
accttcaccacaggtggccgtgtctttgctaacccccaggactgcgcccagcacctgatg
aacggagacacactgagtggcatctacaccatctctatcaacggggacctcagccagcga
gtgcaggtctactgcgacatgaccaccgatggaggtggctggattgtcttccagaggcgg
cagaacggactgactgatttcttccggaaatgggcagattaccgggttggctttggaaac
ttggaggatgagttttggctgggcttggacaacatccacaagattacgtcccaagggcgc
tacgagttgcgaatagacatgagggatggacaggaagcagcatatgcctactacgacaag
ttctccatcggcgactcacggagcttgtacaagctgcgaattggggactacaatggcact
tcaggagactccctcacctatcatcagggccgccccttctccaccaaggacagggacaat
gatgttgctgtgaccaactgtgccatgtcctataaaggggcctggtggtataagaactgc
caccgcaccaacctcaacggcaagtacggagagtcccggcacagtcaggggattaactgg
taccactggaaaggccacgagttctccatccccttcgtggaaatgaagatgcgaccttac
aaccaccgtaacatctctgggaggaagcgacggtccctacagctctga
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