Larus michahellis (yellow-legged gull): 141747717
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Entry
141747717 CDS
T11135
Symbol
PHGDH
Name
(RefSeq) D-3-phosphoglycerate dehydrogenase
KO
K00058
D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:
1.1.1.95
1.1.1.399
]
Organism
lmic Larus michahellis (yellow-legged gull)
Pathway
lmic00260
Glycine, serine and threonine metabolism
lmic00270
Cysteine and methionine metabolism
lmic01100
Metabolic pathways
lmic01200
Carbon metabolism
lmic01230
Biosynthesis of amino acids
Module
lmic_M00020
Serine biosynthesis, glycerate-3P => serine
Brite
KEGG Orthology (KO) [BR:
lmic00001
]
09100 Metabolism
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
141747717 (PHGDH)
00270 Cysteine and methionine metabolism
141747717 (PHGDH)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
lmic04147
]
141747717 (PHGDH)
Enzymes [BR:
lmic01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.95 phosphoglycerate dehydrogenase
141747717 (PHGDH)
1.1.1.399 2-oxoglutarate reductase
141747717 (PHGDH)
Exosome [BR:
lmic04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
141747717 (PHGDH)
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Motif
Pfam:
2-Hacid_dh_C
2-Hacid_dh
PGDH_inter
Motif
Other DBs
NCBI-GeneID:
141747717
NCBI-ProteinID:
XP_074454509
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Position
8:26316195..26320109
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AA seq
529 aa
AA seq
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MALGKLQKVLISDSLDPCCREILQAGGLRVQEKPGLSKEELLREIRDCDGLIVRSATKVT
ADVLEAAERLQVVGRAGTGVDNVDVEAATRKGVLVMNTPAGNSLSAAELTCGMILSLARQ
IPQAAASMKEGKWDRKKYMGMELNGKTLGVLGLGRIGREVATRMQAFGMKTIGYDPIITP
EVSATFGVEQLPLEQIWPRCDFITVHTPLLPSTTGLLNDSTFAKCRRGVQVVNCARGGIV
DEGALLRALQSGQCGGAALDVFTQEPPKDRELVNHPNVISCPHLGASTREAQSRCGKEIA
MQIVDMATGKGLAGVVNGQALSKAFAPQTKPWIALARALGTVLRTVGKKAQGSVQVCTLG
TPLQEAGSYLAPAVAAGMLSGGAQKEVTLVNAQLLAQEAGLKVTTTHSDVAPEPDGGTGL
LQVALQGTPYRATGTVQGSAPVLRELNGATFKQPAPLAGPVLIYRAKASEPSALPTLAGM
LGKVGVQLQSYHSSAIVAGEQWSLVGLSAPLSDLGELKPRVTEVFQLHL
NT seq
1590 nt
NT seq
+upstream
nt +downstream
nt
atggcgctggggaagctgcagaaggtgctgatcagcgacagcctggacccctgctgccgg
gagatcctgcaggccggcgggctgcgggtgcaggagaagcccgggctgagcaaggaggag
ctgctgcgggagatccgggactgcgatgggctcatcgtccgctcggccaccaaagtcacg
gccgacgtgctggaggcggcggagaggctgcaggtggtgggcagagcgggcaccggcgtg
gacaacgtcgatgtggaggcagccaccaggaaaggtgtcctggtcatgaacacgcccgct
gggaacagcctcagtgccgccgagctcacctgtgggatgatcctgtccttggccaggcaa
atcccgcaggcagctgcctccatgaaggagggcaagtgggaccgtaagaagtacatgggc
atggagctgaacgggaagacgctgggcgtgctggggctggggcgcattggcagggaggtg
gccacccgcatgcaggcttttggcatgaagaccataggctacgaccccatcatcaccccc
gaagtctcggccacctttggcgtggagcagctgccactggagcagatctggccccgctgc
gacttcatcacggtacacacaccgctgctgccctccaccacggggctcctgaacgacagc
accttcgccaagtgccgccgcggcgtgcaggtggtgaactgtgcccgcggcggcatcgtg
gacgagggcgcgctgctgcgggcactgcagtcggggcagtgtggcggggctgccctcgat
gtctttacgcaggagcccccgaaggaccgtgagctggtgaaccaccccaacgtcatctcc
tgcccgcatctgggcgccagcacgcgggaggcgcagagccgctgcggcaaggagattgcc
atgcagatcgtggacatggccacagggaaggggctggctggcgtagtcaacgggcaggct
ctcagcaaggctttcgcgccccagaccaagccctggatagccctggccagggccctgggc
acggtgctgcgcacggtgggcaagaaagcgcagggcagcgtgcaggtctgcaccctgggg
acacccctgcaggaagccggaagctacctggcgcccgccgtggccgcgggcatgctgtcc
ggcggggcgcagaaggaggtgaccctggtgaatgcccagctgctggcccaggaggctggg
ctgaaggtcacgaccacccacagcgacgtggcccccgagcccgatggcggcaccggcttg
ctgcaggtggccctgcagggcaccccgtaccgggcgacggggacggtgcagggcagtgcc
ccggtcctgcgggagctcaatggggccaccttcaagcagccggccccgctggccggcccc
gtcctcatctacagagccaaagcctccgagcccagcgcgctgcccacacttgctgggatg
ctggggaaggtgggggtccagctccagtcctaccacagctctgccatcgtggcgggggag
cagtggagcctggtggggctctcggcccccctgtccgaccttggcgagctgaagccgcgc
gtcacggaggtcttccagctccacctgtag
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