Larus michahellis (yellow-legged gull): 141748046
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Entry
141748046 CDS
T11135
Symbol
RBBP6
Name
(RefSeq) E3 ubiquitin-protein ligase RBBP6 isoform X1
KO
K10624
E3 ubiquitin-protein ligase RBBP6 [EC:
2.3.2.27
]
Organism
lmic Larus michahellis (yellow-legged gull)
Brite
KEGG Orthology (KO) [BR:
lmic00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
lmic04121
]
141748046 (RBBP6)
Enzymes [BR:
lmic01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
141748046 (RBBP6)
Ubiquitin system [BR:
lmic04121
]
Ubiquitin ligases (E3)
U-box type E3
141748046 (RBBP6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DWNN
zf-CCHC_2
U-box
zf-C3HC4_2
zf-C3HC4_3
zf-CCHC
zf-RING_UBOX
zf-RING_2
zf-C3HC4
zf-RING_5
zf-C3HC4_4
Motif
Other DBs
NCBI-GeneID:
141748046
NCBI-ProteinID:
XP_074455500
LinkDB
All DBs
Position
8:8018175..8049716
Genome browser
AA seq
1788 aa
AA seq
DB search
MSCVHYKFSSKLNYDTVTFDGLHISLCDLKRQIMGREKLKAADCDLQITNAQTKEEYTDD
NALIPKNSSVIVRRIPIGGVKATSKTYVMTPKSHKILETAFRSRTEPVSGTSKAIDDSSA
SISLAQLTKTANLAEANASEEDKIKAMMTQSGHEYDPINYMKKPLGPPPPSYTCFRCGKP
GHYIKNCPTNGDKNFESVPRIKKSTGIPRSFMMEVKDPNTKGAMLTNTGKYAIPTIDAEA
YAIGKKEKPPFLPEDPSSSSEEDDPIPDELLCLICKDIMTDAVVIPCCGNSYCDECIRTA
LLESEEHTCPTCHQTDVSPDALIANKFLRQAVNNFKNETGYTKRLRKQIQQQQQQQQQPP
PPPPPPPPLMRQTITRNLQPLLRPTISRQQDPLMIPLASLASRSALSSLGPGQSSVAAGL
PVNPSSVVVSDLPPAVSLSLRGEKPDGPFRDADTVLPPAALVTAAELSKSSPLSISSLLE
EKGYQVPVLRQPALPSLLGPQGQSIPTTGHPMRASTIRSAGGRPGWELANRGRPHGDRAQ
RTQAPSLPASTPVFVPVPPPPLYPPPPHALPLPPGVPPPQFPPQFPPGQPPSAGYSVPPP
GYPPAPANMSSAWVPTAVPTAHSNAIPTTQAPPLSREEFYREQRRLKEEEKKKSKLDEFT
NDFAKELMEYKKIQKERRRSFSRSKSPYSASSYSRSSYTYSKSRSGSSRSRSYSRSFSRS
HSRSYSRSPPYPRRGKGKSRNYRSRSRSHGYHRSRSRSPPYRRYHSRSRSPVFRGQSPTK
RTIPQGEGEREYFNRYREVPPYDVKAYYGRSVDFRDPFEKERYREWERNYREWYEKFYKG
YVVGAQPRPPVNRENFSPDRFGPPGTRRENSPYARGRREEYPGGQSHRNRNIAGNYPEKP
SGRESHGIKDPTKSKEKEVENPLGDGKGNKHKKHRKRRKGDENEGFPNAELLEGARKPRE
PVTTEDVKTDSLFMLPSRDDATPVRDEPMEADSIAFKPVSEKEKKEKDKPKAKVDKTKRK
VEVAVPPKKDNVTKPAKASQEKVDTDREKSPRTEPPVKKVKEELPKTDSVKTSSSQKEEK
TAGTPRKVHPKVTKDHPETRPAKEEKAKKDHPKETKSEKPSNKEDKSKKPAEKSKPSDAK
PEKRKRKADEKADKEHEATSVKASKAEPAESKTSPKGKTEPDGEKGERTPEKDKSAFLNN
PAKKIKLNRETGKKIVSGENVPPAKEPVEKPEPSSSKVKQEKAKGKVRRKVTAADGSSST
LVDYTSTSSTGGSPVRKTEEKPDTKRTVIKTMEEYNNDITAPAEDVIIMIQVPQSKWDKD
DFESEEEDIKSTQVPTNIGKPASVIKNVSAKPANPVKHNEKETEPLEKTQKTTKEASYES
SQHDAKSSKSSMLNEKGKTKDRDHSLSDKDTSEKRKSSVQPEKDHSERASEQGNGKNISQ
SSKDSRSSEKHDAGRGSTAKDFTPNRDKKSDHDGNRDHSSSKRRDEKSELARRKDSPSRN
RESASVQKSKPREERAEPSKKGVGDAKRSSYSPPRERKQTDHKAAHDSKRTLEEHKPPDK
NVGKEKEKHVAEVKSNKEKEPGVTKPPVKQESPDVKNEKENVTGQNDKNVVKPKPQVSTS
SRLSSDLTRETDEAAFVPDYNESDSESNVSAKDEEAAGKNPKEPKEKAVEKVKEETTAPA
AVEQPEASRSQSQSSPSVSRSRSQSPSESQTRSHSSSASSGESQDSKKKKKKKEKKKHKK
HKKHKKHKKHVGNETELEKSQKHKHKKKKSKKSKDKEKDDQKVKSVTT
NT seq
5367 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtgcgtccattacaagttctcctctaagctgaactatgatacggtcaccttcgac
ggcctccacatctccctctgcgacctcaagcgccagatcatgggccgcgagaaactgaag
gcggccgactgcgacctgcagatcaccaacgcccagaccaaagaagaatacacagatgat
aatgccctgattccgaagaactcatcggtaattgttagaagaatccctattggaggagtt
aaagctaccagcaaaacatatgttatgactcctaaatcgcacaaaatcctagaaactgct
ttcagaagtcgaactgagccagtgagtggaacatcaaaagcaattgatgactcttctgca
tctatttctctggcccagcttactaagactgccaatctggctgaagccaatgcttccgaa
gaagataaaataaaagctatgatgacacagtctggccatgaatatgatccaatcaattac
atgaagaaacccttgggtccacctccaccgtcatacacgtgctttcgttgtggaaaacct
ggccactatataaagaattgcccaacaaatggggacaaaaattttgagtctgttcccaga
attaaaaagagcacgggaattccaaggagtttcatgatggaggtgaaagatcccaataca
aagggtgctatgctgacgaacactggaaaatatgccataccaactattgacgcggaagct
tatgctataggaaagaaggaaaagcctccctttttaccagaggacccgtcctcctcctca
gaagaagatgatcctattccagacgagttgttatgtctcatttgtaaagatataatgact
gacgcggttgttattccctgctgtggaaacagttattgtgacgaatgtattagaacagca
ttactggaatcggaggaacatacgtgcccaacatgtcatcaaacagatgtttctcctgat
gctttaattgccaataagttcctacgccaggctgtgaacaacttcaaaaatgaaactggc
tacacaaaaaggctccgtaagcagattcagcagcagcaacagcagcagcagcagccgcca
ccgccgccaccacctccaccacccctaatgagacaaacaataacacgcaaccttcagcct
ctgctccggccaaccatttccagacagcaggatccactaatgataccattagcttctctg
gcttctcgttctgctttgtcatcgttgggccctggtcagtcatctgtggcagctgggctg
ccagtaaatccgtcttctgttgttgtctctgatcttcctccagcagtgtccctatccctc
cgtggtgaaaagccagatggaccttttcgtgatgctgatactgttttacctcccgctgct
ctcgtgactgccgctgaactgtctaaatcttcccctctgtcaatcagcagtttgttggaa
gagaagggctatcaggttcctgtactaagacaaccagcgttaccaagtcttctgggcccc
caaggacaatcaatacccacaactggtcatccaatgagagccagtacaattcgctcagca
ggtggcagaccaggctgggagcttgcaaatcgaggacgccctcatggtgaccgtgcccaa
aggactcaggccccatcactaccagcatcaacaccagtctttgtgcctgtgcctccaccg
cccttgtatcctccaccaccccatgcacttcctcttccgccgggggtaccgccaccacag
tttcctcctcagttcccacctggtcagcctccatctgctgggtactctgtcccccctcca
ggatatcccccagctcctgcaaatatgtcatcagcttgggtaccaacagcagtaccaacg
gctcattcaaatgccatcccaacgacacaagcacctcccttatctagggaggagttttac
agagaacaacggagacttaaagaggaggaaaagaaaaagtccaaacttgatgagtttaca
aatgattttgctaaggaattgatggaatataaaaagattcaaaaggagcgtaggcgttcg
ttttccaggtccaagtccccctatagtgcttcatcttactctagaagttcgtatacctac
tcgaagtcaagatcaggttcttcccgttctcgctcctactctcgatcatttagccgttcc
cattctcgttcctactcacgatcaccgccatatccaagaagaggcaaagggaagagtcgt
aattatcgttctaggtcaaggtcacatggttatcaccgttcaaggtcaaggtcacccccg
tacagaaggtaccactcacggtcaaggtctccagtatttagaggccagtctcccactaaa
cggactatacctcaaggggaaggagaaagggagtattttaacagatacagagaagttcca
ccatatgatgtgaaagcatactatggcagatcagttgactttagagatccatttgaaaaa
gaaagatacagagaatgggaaaggaattatagagaatggtatgaaaagttttacaagggc
tatgttgtcggcgctcaacctcgtccgccagtaaatagagagaacttttcaccagatagg
tttggtccacctgggaccagacgagagaattcgccgtatgctcggggacgtagggaggag
tatccaggtgggcagagccacagaaatcgtaatatagcaggaaattaccctgaaaaacct
tctgggagagagagccatggcattaaagatcctacaaaatcaaaagagaaggaggtggaa
aatccactgggagatggcaaaggaaataaacataaaaaacatcggaagagaagaaaaggg
gatgagaatgaaggatttcctaatgccgagttgttagaaggtgcaagaaaaccaagagag
ccagtgacaacagaagacgttaaaacggactctctgttcatgcttccaagcagagatgat
gccacccctgtgagagatgaacctatggaagcagattctattgctttcaaaccagtgtct
gaaaaggagaaaaaagagaaggataagccaaaagcaaaagtggacaagacaaagcggaaa
gtagaagtggctgttcctcctaagaaagataatgtaacaaaaccagctaaagcttcccaa
gagaaggtggacacagatcgtgaaaaatctcctcgaacagaacctcctgtgaaaaaagtg
aaggaggagttgccaaagacagacagtgttaaaacatcttcctctcaaaaggaagaaaag
actgctggtaccccacggaaagttcacccaaaagtgacgaaagatcacccagaaacaaga
ccagccaaggaagaaaaggcaaagaaagaccatccgaaagaaaccaagtcagagaagccc
tccaacaaagaggacaaatcaaaaaagcctgctgaaaaaagcaaaccttctgatgcaaaa
cctgaaaaaagaaaaagaaaagcagatgaaaaggctgataaagaacatgaagccacttct
gtaaaggcctctaaagcagaacctgctgaatcgaaaacatcgccgaaggggaagactgag
ccggatggtgaaaaaggagagcgaacgccagaaaaggataaatctgcttttcttaacaac
cctgcaaaaaagattaaacttaaccgagaaaccggcaaaaagattgtgagtggagaaaat
gtgccacctgcaaaagaacctgttgagaaacctgagccgagcagcagcaaggttaaacaa
gaaaaagcaaagggaaaagtgagaagaaaagtaacagcagctgatggatctagttcaact
cttgtagattacaccagcactagttctactggaggaagccccgttagaaagactgaagaa
aagccagatacaaaacgaactgtcattaagaccatggaggagtataataatgatataaca
gcgcctgctgaagacgtcattattatgatccaagtccctcagtcaaagtgggataaagat
gactttgaatctgaagaggaagacattaaatctacccaggtgcccacaaacataggaaaa
cctgctagtgttataaaaaatgtgagtgctaagccagcaaaccccgtaaaacacaatgaa
aaagagacggagcctttggagaaaacacagaaaactacaaaagaggccagttatgaaagc
tcccagcatgatgcaaaaagttcaaaaagttcaatgttgaatgaaaaaggaaaaaccaaa
gaccgggatcattctttgtcagacaaggacacttctgagaagagaaagagcagtgttcag
ccagaaaaagaccactcggaacgtgcatctgagcaaggaaatggaaaaaatatttctcaa
tcttccaaagacagcagatcttcagagaaacacgatgctggccgtgggtccactgctaaa
gactttactcctaaccgagacaaaaaatctgaccacgatggcaacagagatcattctagt
tccaagcgtagggatgaaaagagtgaattagccaggagaaaagactccccttctcggaac
agagaatctgcatctgtacagaaaagcaagccgagagaggaacgagcagagccgtccaaa
aagggcgttggagatgccaaaaggagcagctacagccctccgcgggagcggaagcagact
gatcacaaagccgctcacgattccaagcgtacattggaggaacacaaacctccagataaa
aatgtaggaaaagagaaagagaagcatgtagcagaagtaaagagcaataaagagaaagag
ccaggtgttactaaaccacctgtgaaacaagaatcgccagatgtaaaaaatgagaaagag
aacgtgactggacaaaacgataaaaacgtcgtcaagcccaagcctcaggtaagcacctcc
tcacggctctcttctgatctaactcgagagactgatgaggctgcgtttgtaccagactac
aacgaaagtgacagtgagagtaatgtatctgcaaaagatgaggaagctgcaggaaaaaat
ccgaaagaaccgaaagaaaaagctgttgaaaaggtgaaagaggagacgacagcacccgct
gcagttgagcagcctgaagccagcagaagtcaaagtcagagcagccccagcgtgagccgc
agccgtagtcaaagcccttccgagagtcagactcgaagccacagcagcagtgccagctca
ggagagagtcaagacagcaagaaaaagaaaaagaaaaaagagaagaagaagcacaagaag
cataagaaacacaagaagcataagaaacacgtgggaaacgaaacggaattggaaaagagc
caaaaacacaaacacaagaagaaaaaatcaaagaagagcaaagataaagagaaagatgac
caaaaagtgaaatctgtcactacatag
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