Larus michahellis (yellow-legged gull): 141748074
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Entry
141748074 CDS
T11135
Symbol
ERCC4
Name
(RefSeq) LOW QUALITY PROTEIN: DNA repair endonuclease XPF
KO
K10848
DNA excision repair protein ERCC-4 [EC:3.1.-.-]
Organism
lmic Larus michahellis (yellow-legged gull)
Pathway
lmic03420
Nucleotide excision repair
lmic03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
lmic00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
141748074 (ERCC4)
03460 Fanconi anemia pathway
141748074 (ERCC4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lmic03032
]
141748074 (ERCC4)
03400 DNA repair and recombination proteins [BR:
lmic03400
]
141748074 (ERCC4)
DNA replication proteins [BR:
lmic03032
]
Eukaryotic type
DNA Replication Termination Factors
Other termination factors
141748074 (ERCC4)
DNA repair and recombination proteins [BR:
lmic03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
Other NER factors
141748074 (ERCC4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ERCC4
HHH_5
SRP14
Motif
Other DBs
NCBI-GeneID:
141748074
NCBI-ProteinID:
XP_074455640
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All DBs
Position
8:11865329..11883949
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AA seq
903 aa
AA seq
DB search
MAALLEHESQIFLDLFHQDGLVICARGLGVDRLLLRFLRLYCEPASLVLVLNTSPAEEEY
FIDQLRSDGVVHLPRCVTNEITNNTRYEFYTQGGVIFATSRILVVDFLTDRIPANLITGI
LVYKAHRIIESCQEAFILRLYRQKNKQGFIKAFTDNAVAFNTGFCHVERVMRNLFVKKLY
LWPRFHVAVNSFLEKHKPEVVEIHVSMTPAMLAIQTSILDILNACLRELKRYNPALEVED
LSLENAIGKPFDKTIRHYLDPLWHQLGAKTKSLVQDLKILRTLLLYLTQYDCVTFLNLLE
SLKASEKAFGENSGWLFLDSSTSMFVNARARVYRIADEKLNQQGKVSEKSDVKKENELKR
ELVLESNPKWEALREVLKEIENENKNSEDLGGPGQVLICASDDRACAQLREYIIAGAEGF
LTRLYNKTFGKDEKAGEVWITDKKATKSKGNARPDTVPQAKKAKLTASSKQNKHKKQQDR
TIIQMIGKTEEEREXELEMEDNKELSSSQESSIEESIPEDFHMNLPSDCYYGIFKNPLTI
IHPLQGCSDPYALTRVLHEVEPRYVVLYDAELTFVRQLEIYKASRPGKPLRVYFLIYGGS
TEEQRYLTALRKEKEAFEKLIRERAGMVIPEEREGRDETNLDLIRDAKPASVSTDTRKAG
GQEQKSVQQTIIVDMREFRSELPSLIHRRGIDIEPVTLEVGDYILTPDICVERKSISDLI
GSLNNGRLYAQCTSMSRYYKRPILLIEFDPNKPFSLIPRGSLHQEISSNDITSKLTLLTL
HFPKLRMLWCPSPHATAELFEELKQNHPQPDAETAMAVTADSEILPESDKYNPGPQDFLL
KMPGINAKNCRALMNHVKSIAELVTLSKDELSKILGNAANATQLFDFIHLTYGEAISKGK
SKR
NT seq
2712 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgctgctggagcatgagagccagatcttcctggacctcttccaccaggacggg
ctggtgatctgcgcccgcgggctcggtgtcgaccgcttgctgctgcgcttcctccggctg
tactgcgagcccgccagcctggtgctggtgctcaacacaagcccggccgaggaggaatat
tttattgatcagctgaggtcagatggagtcgttcatcttcctcggtgtgttaccaatgaa
attacaaataatactcgatatgaattttatacacaaggaggagtcatctttgcaacaagt
cgaatccttgtggtggatttccttactgacagaattcctgcaaacctcattaccggcatt
ttggtatacaaagcacacagaatcattgagtcctgtcaggaagcatttatcttgcgactt
tatcgccagaagaacaagcaaggcttcattaaagcttttacagataatgcggttgcattt
aatactggcttttgccatgtggaaagagtgatgagaaatctttttgtcaagaaactttat
ctgtggccaagatttcatgtagcagtgaactcatttttagagaagcataaacctgaagtg
gtggaaatacatgtgtcaatgacccctgctatgcttgcaatccagacttccatcctggac
atcttgaatgcatgtctgagagaactcaaacgttataatccagctcttgaagtagaagat
ctatctttagaaaatgctattggtaaaccttttgacaagacaatacgtcactacttagat
cctctctggcatcagcttggagctaagacaaaatctttggtccaggatttgaagatacta
cgtactttgctactgtatctaactcagtatgattgtgtcactttccttaatcttctggag
tcactgaaagcaagtgaaaaagcttttggtgagaattcaggttggctgtttcttgactcc
agtacttcaatgtttgtaaatgctcgagctagagtttatcgcattgcagatgagaaactg
aatcagcaaggcaaagtctctgaaaaaagtgatgtaaagaaggaaaatgaactgaaaagg
gaattggttctagaaagtaacccgaaatgggaagctttgagagaagtactgaaagagatt
gaaaatgagaataagaacagtgaagaccttggtggtccagggcaagtgcttatttgtgcc
agtgatgaccgagcttgtgcacagctcagggagtatattattgctggagcagaaggtttt
ttaacaaggctgtataacaaaaccttcggaaaggatgagaaagctggagaagtgtggatc
acggacaaaaaagccaccaagtccaaaggaaatgccagaccagacacagtgcctcaagcc
aaaaaagccaaactcacagcttcttcaaaacaaaataaacacaagaagcagcaagaccgg
actataatccaaatgatagggaaaactgaggaggaaagagagnaggagttagagatggaa
gataacaaagaattaagcagtagccaagaaagcagtattgaagagagtattcctgaagac
ttccatatgaacttaccctcagattgttactacggtattttcaagaacccgctcacaatt
attcacccattgcagggttgcagcgatccctacgcactcactcgggtactgcatgaagta
gaaccaagatacgttgtattatatgatgcagaactaacttttgttcggcagctggaaatc
tacaaggcaagcaggcctgggaagcctttgagggtttatttcctcatatatgggggctca
accgaagaacagcgctatctcacagctctgagaaaagagaaggaggccttcgaaaaacta
attcgagagagggccggcatggttattcctgaagaaagagaaggaagagatgaaacaaac
ttagacctaatcagagatgctaaacctgcctctgtttctactgacacgcgcaaagcaggt
ggacaggaacagaagagtgttcagcaaaccataatagtggatatgcgggaatttcgtagt
gagcttccatcactgattcatcgtcgtggcattgacattgagcctgttactttggaagtt
ggagattatattttaactcctgatatctgtgtagagcggaaaagtatcagtgatctgatt
ggttccttaaataatggaagactgtatgcacaatgcacttctatgtcccgttactataag
cgaccaattctcctgattgagtttgatcctaacaaacctttctccttgattccacgaggc
tctctacatcaggaaatttccagtaatgacatcacttctaagctaacccttcttacactc
catttcccaaagttacgtatgctgtggtgtccctctccccatgctactgctgaactgttt
gaagagttaaaacaaaaccatccccaacctgatgcagaaacagcaatggctgtcacagca
gattctgaaattcttccagagtcagacaagtacaatcctggtccacaggactttctatta
aaaatgccaggtattaatgcaaagaactgccgtgccttaatgaaccacgttaaaagcatt
gcagagctagtgacactgtcgaaggacgaactctccaaaattttgggtaatgctgccaat
gccacgcaactctttgacttcattcacctgacctacggagaggcaatatctaaaggaaaa
agcaaaagatga
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