KEGG   Larus michahellis (yellow-legged gull): 141748229
Entry
141748229         CDS       T11135                                 
Symbol
COL4A5
Name
(RefSeq) collagen alpha-5(IV) chain
  KO
K06237  collagen type IV alpha
Organism
lmic  Larus michahellis (yellow-legged gull)
Pathway
lmic04382  Cornified envelope formation
lmic04510  Focal adhesion
lmic04512  ECM-receptor interaction
lmic04518  Integrin signaling
lmic04820  Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:lmic00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    141748229 (COL4A5)
   04518 Integrin signaling
    141748229 (COL4A5)
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    141748229 (COL4A5)
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    141748229 (COL4A5)
 09150 Organismal Systems
  09158 Development and regeneration
   04382 Cornified envelope formation
    141748229 (COL4A5)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:lmic04147]
    141748229 (COL4A5)
   00536 Glycosaminoglycan binding proteins [BR:lmic00536]
    141748229 (COL4A5)
Exosome [BR:lmic04147]
 Exosomal proteins
  Exosomal proteins of other cancer cells
   141748229 (COL4A5)
Glycosaminoglycan binding proteins [BR:lmic00536]
 Heparan sulfate / Heparin
  Extracellular matrix molecules
   141748229 (COL4A5)
SSDB
Motif
Pfam: Collagen C4
Other DBs
NCBI-GeneID: 141748229
NCBI-ProteinID: XP_074456032
LinkDB
Position
9:complement(37944720..38028431)
AA seq 1687 aa
MEPRLWSCSLAAGCLLLLGCWGPEEAVAAACHGCTSSSKCDCSGVKGEKGERGFPGLEGQ
PGLPGFPGPEGPPGPRGSKGDDGLPGPIGPKGIRGPPGLPGFPGTPGLPGLPGQDGPPGP
QGIPGCNGTKGERGFPGSPGFPGLQGPPGPPGLPGMKGEPGEIITSLLPGQKGDPGFPGL
PGIPGPPGSMGVPGPIGPPGPPGLTGPPGPPGLPGPKGNMGLNFQGPKGEKGEQGLQGPP
GPPGQIGEQKRPNDIEFQKGDQGIPGDPGPPGLPGPQGPPGLPGGVKGEKGEQGEPGKRG
KPGKDGEPGQPGRDGLPGGPGINGAPGREGEKGEKGDTGPPGPPGIVISRPGIDATVGPK
GSKGLPGLPGAKGERGFSGRPGPPGLPGSPGITTVGPPGPPGLPGERGQKGDPGLPGVSI
PGQPGLDGPRGPPGPPGPPGPTAPSVPPGEGLCERGPPGPPGIPGQQGFTGERGQKGDQG
DTCFNCIGTGITGPPGERGPPGPPGSPGSPGFPGPKGEKGLPGLTGLVGPPGFPGSPGPP
GRPGPKGDPGDVLTSPRMKGDKGDPGFPGPPGLPGLDGTPGRDGLPGLPGPKGEPGSVAF
KGEIGIPGDPGIPGPPGDKGLPGPPGFGPQGSPGEKGIQGVSGRPGPPGVPGPKGDPGQT
ITEPGVPGPPGPPGRNGDPGLPGDPGQPGQRGLPGIPGAKGEPGIPGIGLPGPPGPKGFP
GTPGPPGAPGTPGRPGLDGPPGPPGFPGQKGDRGFGVPGPPGPPGPPGTKGVQGPKGDPG
FPGNPGLPGRAGFDGTPGPKGDPGPSGPPGLPGPPGIPGIGGQGPPGSPGPPGPVGPPGL
QGIPGEKGDPGPPGFDVPGPPGDRGTPGYPGPPGLPGPQGSPGPPGRDGMPGFPGAKGEM
GVMGAPGPPGPPGTPGRNGLPGLKGNSGLPGPPGPPGPVGQKGIKGEAGLPGPPGKVDPK
QLGAKGEKGEPGVPGIPGLSGQKGYQGLPGDPGPPGLSGPPGVPGLPGIKGDTGLPGQPG
PTGPPGVKGAMGEMGLPGPPGIKGSQGIAGRPGQPGPAGFPGLKGEKGDPGLSSIGIPGL
PGPKGDLGLPGYPGSPGSKGVAGNPGLPGFPGSPGAKGEPGLPGFPGTPGIPGPKGIEGP
PGNPGLPGPPGPVGDIGRPGPPGPSGEKGQPGRDGIPGPAGQKGEPGLPGFGRPGPPGLP
GLSGQKGELGLPGPPGPPGLPGLKGEPGFQGFPGLQGPPGPPGLPGPPLEGPKGSPGPPG
VPGRPGPPGPEGPRGPPGSGGLKGEKGNPGQPGPPGLPGQKGDHGPPGRQGDPGRPGLNG
MKGDPGVPGVPGFPGMKGPTGPAGPTGLTGSQGLPGPPGPPGLPGTIGRSIVVKGDPGPP
GPPGQPGSKGPPGLPGPQGLPGPIGHPGDPGRDGLPGFDGPAGRKGERGLPGQPGSRGIQ
GPPGPDGVQGPPGPPGTASVAHGFLITRHSQTRDTPLCPQGTSRIYDGFSLLYVQGNERA
HGQDLGTAGSCLRRFSTMPFMFCNINNVCNFASRNDYSYWLSTPEPMPMSMEPLTGQSIQ
PFISRCVVCEAPAMVIAVHSQTIQIPSCPPGWDSLWIGYSFMMHTSAGAEGSGQALASPG
SCLEEFRSAPFIECHGRGTCNYYANSYSFWLATVEVSEMFSKPQSETLKAGDLRTRISRC
QVCMKKT
NT seq 5064 nt   +upstreamnt  +downstreamnt
atggagccgcggttgtggagctgcagcctggctgccggctgcctgttgctgctggggtgc
tgggggccggaggaggcggtggcggcggcttgccatggatgtacatcttcatccaaatgt
gactgcagtggagtaaaaggtgaaaagggtgaaaggggattcccaggcttggaaggacag
ccaggtttgcctggatttccaggacctgaaggaccacctggtccaagaggctcaaagggt
gatgatggacttccaggacctattggacccaaaggaatcagaggacctccagggcttcca
ggatttccaggaacaccaggacttcctggattaccaggacaagatgggccaccaggacct
cagggtatcccaggatgcaatggaacaaagggagagcgtggattcccaggcagtccaggt
tttcctggtttacaagggcctcctggaccccctggtctgccaggtatgaagggtgaacca
ggtgaaataattacatccttgctgccaggacagaagggcgacccaggatttccaggtctt
ccaggcatacctggcccacccggctccatgggagtaccaggtccaattggccctccaggg
ccaccaggtttgacaggacctcctggtccaccagggctgccaggacctaagggtaatatg
ggtttgaatttccaaggacccaaaggtgaaaaaggtgaacaaggtcttcagggacctcca
gggccaccaggacaaattggagaacagaagagaccaaatgacattgagtttcagaaagga
gatcagggtattccaggtgatccaggcccaccaggacttcctgggccacaaggccctcct
ggtcttcccggtggcgtaaaaggtgaaaaaggtgagcaaggagaaccaggcaaaagagga
aaacctggcaaagatggagaacctggtcagcctggtagggatggtttacccggtgggcct
ggaatcaatggtgctccaggaagagagggcgaaaagggtgaaaaaggtgacactggtccc
cctggtcctcctggaattgtcatttcaagaccaggcattgatgcaacagtgggaccaaaa
ggtagcaaaggattgccaggacttccaggagccaagggggagcgtggattctctggtagg
ccaggcccacctggcttaccaggttctccagggatcactactgttggacctcctggccca
cctggcttacctggtgaaagaggacagaagggagatccaggtttacctggtgtttctatt
cctgggcaaccaggacttgatggaccacgaggacctcctggaccaccaggtcccccaggg
ccaactgcaccatctgttcctcctggtgaagggttatgtgagcgtgggccaccaggtcct
ccaggaattccaggacaacaaggctttacaggggagcgaggccaaaaaggtgatcaagga
gacacatgcttcaattgcataggaactggaataactgggcctcctggggagagaggacca
ccaggacctccaggtagtccaggttctcctggttttcctggaccaaaaggtgaaaagggg
cttcctggattaactggccttgtagggccaccaggattcccagggtccccaggtcctcct
gggagacctggtcctaaaggagacccaggggatgtcctgacttctccaagaatgaaaggt
gacaaaggagaccctggcttcccaggacctccaggtcttcctggcctagatggcactcct
ggacgagatggactgccaggtctacctggtcctaagggggaacctggcagtgttgcattc
aaaggagaaataggtattccaggtgatccaggaataccaggtcctcctggagacaaagga
cttcctggacctcctgggtttggtccacaaggttcccctggtgaaaagggtatccaaggt
gtatcaggccgcccagggcctcctggagttcctggtccaaaaggtgaccctggccagact
attacagaaccaggagttcctggcccccctggtcctccgggaagaaatggtgacccaggt
cttccaggagatcctggtcagccaggtcagcgtggcttaccaggcatcccaggagcaaag
ggagagccaggtattcctggcattggacttccaggtccaccaggcccaaaaggtttccca
gggacaccaggccctcccggagctccgggaactccaggtcgccctggtctagatgggcct
cctggaccacctggtttcccaggacagaagggagatcgtggatttggagttccaggacca
cctggacccccaggaccaccaggcacaaaaggagttcaaggacccaaaggtgatcctggc
ttcccaggaaaccctggtctcccaggacgggcaggttttgatggaacgccagggcctaaa
ggtgaccctggaccaagcggaccaccaggactcccaggcccaccaggcatccctggcatt
ggtggtcaaggtccacctggatctccaggacctccaggtcctgttggccccccagggttg
cagggcattccaggggagaaaggggatccgggtcctccaggcttcgatgttcctggtcct
ccaggcgaccgaggaaccccaggatatccaggaccccctggtctcccagggcctcagggt
tcacccggaccacctggccgggatggaatgcctggatttccaggtgccaaaggtgagatg
ggcgtcatgggagctcccggtcctccagggcctccaggaactcctggaagaaacggcctg
cctggcttgaaaggtaacagtggattacccggtccgccagggcctcctggaccagtagga
cagaaaggtatcaaaggtgaagcaggcctgccaggtccacctggaaaagttgatccaaaa
cagctaggagcaaaaggagaaaaaggcgagccaggtgttccaggtattcctggtttatca
ggacagaaaggttatcaaggtctcccaggtgacccaggcccaccaggacttagtggccca
ccaggtgtgccaggattgccaggcatcaagggagacacagggcttcctggacagccagga
ccaacaggacctccaggggtgaaaggtgccatgggagagatgggccttccaggtccccca
gggattaaaggcagccaaggaatagcaggacgcccagggcagcctgggcctgcaggattt
cctggattgaaaggggagaaaggtgaccctggtctttcaagcattggtattcctggtctc
cctggaccaaagggtgatcttggtttgcctgggtacccaggtagtccaggcagtaaaggt
gtcgctggaaatcctggtttgcctggatttccaggcagtccgggtgcaaaaggagaacca
ggccttcctggattcccaggaacgccaggaattccaggaccaaaaggtatcgagggacct
ccaggtaatcctggcctgcctggaccacctgggccagtaggtgatattggccgtcctggc
cctcctggtccttcaggggagaagggacagcctggtcgagatggtatccctggaccagct
ggtcagaagggtgaaccaggtctaccaggttttgggcgcccaggacccccaggactccca
ggattgtcagggcaaaaaggagaactggggttacctggcccaccggggccccctggactt
ccaggtctgaagggagaaccaggttttcagggattccctggtctacagggtccaccaggt
ccaccaggattaccagggccacctctagaaggtcctaaaggtagccctggcccaccaggt
gttccaggaaggccaggtccaccaggcccagaaggtccacgagggccaccaggcagtgga
ggacttaaaggggaaaaagggaacccaggtcaacctggcccacctggcctgcctggtcaa
aagggagatcatggaccacctggacgccagggggatcctggtcgtccaggcctgaatgga
atgaagggcgaccccggggttccaggagttccaggattcccaggtatgaagggtcccact
ggacctgcaggacccactggcctcacaggcagtcaaggactgccaggcccaccaggtcca
ccaggtttaccaggtaccattggacgaagcattgttgtcaaaggtgaccctggtcccccg
ggtcctccaggacagcctgggtcgaaagggccacctggactgccagggccacagggattg
ccaggtccaattggtcatcctggtgacccagggcgagatggactacctggttttgatggt
ccagcaggacgtaaaggagaaagaggtcttccaggccagccaggttcacgaggaatacag
ggacctcctggtcctgatggcgtacaaggcccacctggtcctcctggaacagcttctgtt
gctcacggattccttataactcggcacagccagaccagggatacaccactatgtccacaa
ggaacgtcaagaatatatgatggattctctcttctatatgtgcaaggaaatgagagagca
catggccaggatttgggtactgctgggagctgtcttagacgtttcagcaccatgcccttc
atgttctgcaacatcaacaatgtttgtaattttgcatcaaggaatgactattcctattgg
ctgtcaactccagagccaatgccgatgagcatggagccactgactgggcaaagcatccag
ccattcattagccgctgtgttgtgtgcgaagctcctgctatggtgatagctgtccacagt
cagaccattcagattccttcgtgtcctccaggctgggactccctttggattggttattct
ttcatgatgcacactagtgcaggagcagagggctctggacaggccttggcatcgcctgga
tcctgtttagaagaattccgctcagctccgtttattgaatgccatggtcgtggcacttgt
aattactacgccaattcatacagtttctggctggcaactgtagaggtgtcagaaatgttc
agtaaacctcagtcagagacactgaaagctggagacttgaggacgcgtattagtcgttgt
caagtttgcatgaagaagacgtaa

DBGET integrated database retrieval system