Larus michahellis (yellow-legged gull): 141748333
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Entry
141748333 CDS
T11135
Symbol
LTN1
Name
(RefSeq) E3 ubiquitin-protein ligase listerin
KO
K22377
E3 ubiquitin-protein ligase listerin [EC:
2.3.2.27
]
Organism
lmic Larus michahellis (yellow-legged gull)
Brite
KEGG Orthology (KO) [BR:
lmic00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
lmic03009
]
141748333 (LTN1)
04121 Ubiquitin system [BR:
lmic04121
]
141748333 (LTN1)
Enzymes [BR:
lmic01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
141748333 (LTN1)
Ribosome biogenesis [BR:
lmic03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
141748333 (LTN1)
Ubiquitin system [BR:
lmic04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
141748333 (LTN1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ltn1_1st
LTN1_E3_ligase_6th
UBC_like
LTN1_E3_ligase_5th
zf-RING_2
HEAT_GCN1
zf-ANAPC11
FANCL_C
zf-rbx1
RINGv
zf-RING-like
zf-RING_16
zf-C3HC4_2
Motif
Other DBs
NCBI-GeneID:
141748333
NCBI-ProteinID:
XP_074456346
LinkDB
All DBs
Position
1:complement(119594402..119625824)
Genome browser
AA seq
1770 aa
AA seq
DB search
MGGKNKQRTKGNLRPSSSGRAAELLAKERGTVPGFIGFGTSQSDLGYVPAVQGAEEIDSL
VDADFRMVLRKLSKRDVTTKLKAMQEFGTMCKEREAEIVKGVLPYWPRIYCKISLDHDRR
VREATQQSFEQLILKVKKHLAPYLKSIMGYWLVAQCDAYSPAASAAKVAFEKAFPSSKQP
EALAFCKDEILNVLQDHLLKETPDTLSDPQTVPEEEREAKFFRILTCSLLALKKLLSMLP
KKEMHSLEEKLMSLLSQNKFWKYSKHSVPQVRSAFFELASAFCQYLPELVKTEAPRVCPA
VLLSVDDSDAVVCPALWEAVLYVTATVEDCWSHVNAKKGVLPKLWTMLREGGRGLATVIY
PNLLPFISKVPPGIAEPKLEYFRTFFGSIIQGLSSERAIASPSESSAIISAFMECLRFVI
LQKTDKEDDQRQIHQMLIYDQLIPLTDAVLKEPRLQNGPLFYQIAETLSTWEAKAELSDD
GSTDEVFQKLLSNFWDHLLKKCVVYVDTLDADEKLLFAISGMLEILQNPKSATKPNNRKS
LKIRFTDEDESERNTENGKLTEVRNSDCEIQTDLQHSSLLRKEPLENLVCNLAELSIVYV
NEQKSEQHLKFLSALLNSFSSNRVFKVLLEQGNDVSSAQAESQNEIKAHHESPSVQFLYM
NLITWLKEDWRKDTHFLVDILYSVLNCCSTNVERKIILDDLTKMDLKWIIFLQIIQKACS
STTKLSLVSDWLKGDTLGERLVMLADDLCHLGLKPIAAPSESSSSERWTLLSLVLSQHIK
NESLIGETVVERIIDKLQAALSKAKDLSEAGNTEPSVSFICDVASSFFSSVKGCLLMPSS
EDLLLTIFQLYAQRQDATHLTDLLVCKLKHTWMSGVHSLVHQLRSMQKQSTFLHKSALWV
KNQIQSSSLDVKSLQVLISAVGDLLSKLMEADGQSGYLVGAYVEHVTPNKAEWGKLQESL
STEWMHKPLLEGRLSMNREPLGSCVKLCGTTKLPGHLCASALLSKMVLLVLENGLVHGND
DAERKKIDNIIAELLYSLQWIEELENPPCLLLEYLHMLEEMHITYEKFSTLSNTTSLQQT
IFDRSEEHGRLWSLTMAKAIRAENTVSCEMKQLFKTTEGFVPLTEGKLHTLQCLSPFLIE
EEKKELVFHCVAKLMTCPQTELSSTDGAFGCLSILNSCLNDRSIDCDHLLPGILKIIMSW
KNDNEDSFLFSCNLKETSAELLGFNIEMIRYLPLLLKYSTAPLADNEWDFIMCSMLAWLE
TTSESRLLYHIPLVQIFACVTCDLASALSAYFEAASPETTENLPVNLISEWNDFFSEGIH
NLLLPLLVKVTGETKNASEGSFQSSVLTSLGEALTYISKDQLLNHKLPAKFVAGQKTNLP
DKLQTLLNTLSPLLLFRARPVQISVYHMLYKLMPELPKFDDEDLKSYGDEEEESALSPPA
ALMSVLATQELLLENILECIPVGEFAVIQPLSDEFCLVLGYLLTWKLTLAFFKAASSQLR
VLYSQYLRRTKSLNKLLYHLFRLMPENPVISGPTSEVPNKDTKTFFTEELHLDVKGTGAL
SSQIPHLACSVYHITLKDLPAMVRLWWNSCEKRVFNVVDKFTSKYVSSVLSSQEISSVQN
STQLFNGITVKARSAAREVIATYSVDDIFIELIIQLPSNYPLGSITVESGKRVGVAVQQW
RNWMLQLSTYLTHQNGSIMEGLSLWKNNVDKRFEGIEDCMICFSVIHGSNYSLPKKACRT
CKKKFHSACLYKWFTSSNKSTCPLCRETFF
NT seq
5313 nt
NT seq
+upstream
nt +downstream
nt
atggggggcaagaacaagcagcgaaccaagggcaacctgcggccttctagcagtggccga
gctgcagagctccttgccaaagaacgtggaacagtgcctgggtttattggctttggaaca
tctcagagtgatctagggtatgttccggcagttcaaggagcagaggaaatagacagcctt
gtggatgctgattttcgaatggtgttgcgaaaactttctaaaagggatgtcacaacaaaa
ttaaaagctatgcaagaatttgggacaatgtgcaaggaaagagaagcagaaattgttaaa
ggtgttcttccttactggccaagaatttattgtaaaatctcactagatcatgatcgccgt
gttcgagaagcaactcagcaatcttttgagcaactgattcttaaagtaaagaagcactta
gctccttacttaaaaagtatcatgggatactggctggttgctcaatgtgacgcttactcc
cctgctgcttctgctgcaaaagtagcttttgaaaaagcttttccttcaagcaaacaacct
gaagccttagcattctgtaaagatgaaattcttaatgtacttcaagatcaccttctgaaa
gaaacacctgatacactcagtgatccccaaactgtaccagaggaagaaagggaagccaaa
tttttccggattctgacctgttccttgttagctttaaaaaagttgcttagcatgttgcca
aagaaagagatgcattcattggaggaaaagttaatgtcacttctgtcccaaaacaaattt
tggaaatacagcaaacacagcgtaccacaggttcgctcagctttctttgagctggcttct
gctttttgtcagtacttgcctgagctggtgaaaactgaagcaccaagagtttgtcctgct
gttcttcttagcgttgacgacagtgatgcagtggtgtgtcctgctctttgggaagctgta
ctttatgttaccgccactgttgaggactgttggagtcatgtaaatgccaaaaagggagtt
ctaccaaagctatggacgatgcttcgagaaggtggacgaggactagctactgttatatac
ccaaatcttttgccgttcattagcaaggtacctcctggcattgcagaaccaaagctggaa
tatttcagaacttttttcggctctataattcaagggttgtcaagtgagcgagcaatagcc
agcccttcagaaagttcagcaattataagtgcatttatggaatgcctgcgctttgtcata
cttcagaaaacagacaaagaagatgaccaaagacaaattcatcaaatgcttatatacgac
cagctaattcctcttactgatgctgtacttaaggagcccaggttacaaaatggaccgtta
ttttatcaaatcgcagaaacactgagcacctgggaagctaaagcagaactctctgatgat
ggtagcacagatgaagttttccagaaactgttgtcgaatttttgggaccatcttttaaag
aagtgtgtagtttatgttgatacgttggatgctgatgagaagttgttgtttgccatatct
ggtatgctagaaattcttcagaatccaaagagtgctacaaaaccaaacaatagaaaatct
ttaaaaatcagatttacagatgaggatgaatctgaaagaaacacagagaatggaaagctc
acagaagtgagaaatagtgactgtgaaatacagactgacttgcagcatagttcgcttcta
aggaaagaacctttagaaaatttagtctgcaaccttgctgaactgagtattgtgtatgtc
aacgaacagaagtcggaacagcatttgaaatttctctctgcgctgctcaactccttttct
tcaaacagagttttcaaagtacttttagagcagggaaatgatgtaagctctgctcaagct
gaatcccaaaacgaaattaaagctcatcatgaaagtccatctgtacaatttctgtatatg
aatttaataacttggctgaaggaagactggaggaaagacacccattttctggttgatatt
ttgtatagcgtgcttaattgttgcagcactaatgttgaaaggaaaataattcttgatgat
ttaacaaagatggatctgaaatggattatttttctccagataattcaaaaggcgtgctca
agcacaacaaaactttccttagtgtctgactggctgaaaggagatacgcttggagaaaga
cttgtaatgctggcagatgatctgtgtcacctgggtttaaaacctatagcagccccatca
gaatcatcctcttcagaaaggtggaccctcctcagcttagtgttgtcacaacacattaaa
aatgaatctttgattggtgaaactgttgtcgaaaggattattgataaacttcaagcagct
ctgtctaaagctaaggatctttctgaagctggaaatactgaaccatcagtatctttcatc
tgcgatgtagcctcaagctttttcagctcagttaaagggtgtttactgatgccatcctca
gaagacttgctgcttaccatcttccaattgtatgctcagaggcaggatgctacacattta
acagacttacttgtatgtaaattaaaacacacctggatgtctggtgtacattcacttgtg
catcaacttcggagcatgcagaagcagagtacctttttgcataaatctgcactgtgggtt
aagaatcaaattcagtcttcctctttggatgtgaaaagccttcaggttttgatctctgca
gttggcgatttgttgtcgaagcttatggaagctgatggacagtctgggtatcttgtggga
gcttatgttgagcatgtcacaccaaacaaagctgagtgggggaaactgcaagagtctcta
tccactgagtggatgcacaaacctcttttggaaggaaggcttagtatgaaccgtgaacct
ttgggatcatgtgtcaagctgtgtggcacaactaaacttccaggccatctgtgtgcttca
gccttactaagtaaaatggtgctacttgtgttggaaaatggtctagtccatggaaatgat
gatgctgaaagaaagaaaattgacaatataattgcagagctattgtactcattacaatgg
attgaagaattggagaatcctccgtgtctgcttctggaatatcttcatatgttagaagaa
atgcacatcacatatgagaagttcagtacacttagcaatacaactagccttcagcaaaca
atatttgatagatcagaggaacatggaagactctggtccttaaccatggctaaagcgatt
cgtgcggaaaacactgtatcctgtgagatgaaacaactttttaagacaacagaagggttt
gtgccattaacagagggcaaattgcatacacttcagtgtctatcaccttttttaattgag
gaagaaaagaaagaacttgtcttccactgtgtggccaaacttatgacatgcccacagaca
gagctttctagtactgatggagcatttgggtgtctttccattttgaactcctgcttgaat
gatagaagtattgattgtgatcatctgttacctggtatactaaaaatcatcatgtcttgg
aaaaatgataacgaggacagctttctctttagctgcaatctgaaagaaacgagtgccgag
ttgcttggtttcaacatagagatgatccgttaccttcccttgctgctgaagtattccaca
gcgcctttggccgataatgaatgggacttcatcatgtgctccatgctggcttggttggag
acaacaagtgaaagccgtttgctttatcacatcccgctcgtgcagatttttgcttgcgtc
acttgtgacttagcatctgcccttagtgcttactttgaagctgcgtctcctgaaactact
gaaaaccttcctgtgaacttgatcagtgaatggaatgacttcttttctgaaggaattcac
aatttgctgttaccattgttggtgaaagtcacaggagaaaccaaaaatgcatctgaaggc
tcctttcagagctctgtgttaacgtctttgggtgaagctctaacatacatctcaaaggac
cagttgttaaaccataaattgccagcgaagtttgttgcaggccagaaaacaaatcttcca
gataaactccagactctactaaatacgttatctccgttgttgcttttccgggctagacct
gtacagatttctgtctaccatatgttgtataaattaatgcctgaattgcctaaattcgat
gatgaagatctcaaatcttacggtgatgaagaggaggaatcagcattgtcacctccagcg
gctcttatgtctgtcctggccactcaagaactcttgctagaaaacatcctggaatgcatt
ccagttggagaatttgcagttattcagcccctgagtgatgagttctgccttgttctaggt
tatcttcttacttggaagttaacattagctttcttcaaagctgcttcttctcagctgcga
gttctctactctcaatacctgagaagaactaaaagcttgaataaactgctttatcacttg
ttcaggctcatgcctgaaaaccctgttatttctgggccaacttcagaagttccaaataag
gacacaaaaaccttctttactgaagagcttcatttagatgttaaagggacaggagccctg
tcctcccagattccgcacttggcctgctctgtgtaccatataacgctgaaagacttgcca
gccatggtcaggctttggtggaatagttgtgagaaacgtgtcttcaatgttgtagataaa
tttacaagcaaatatgtcagcagcgtgctttcttcacaggaaatatcttctgttcagaat
agcacacagttgtttaatggcataacggtaaaagctcggtctgctgcacgggaagtcatt
gctacctattcagttgatgatatatttattgaactaataatacagcttccgtcaaattac
ccactgggatccataacggttgagagtggaaagagggttggtgtggctgtacagcaatgg
cgcaattggatgctacagttaagcacatatcttacacatcagaatggaagtataatggaa
ggcttgtcgttgtggaaaaataacgtggataaacgttttgagggcattgaagattgcatg
atctgtttttcagtcattcatggctccaactattctcttcctaaaaaagcttgcagaaca
tgcaagaaaaagtttcattcagcttgcttgtacaaatggttcacatccagcaacaaatcc
acctgtccactctgtcgagagacgtttttctga
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integrated database retrieval system
