Larus michahellis (yellow-legged gull): 141748606
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Entry
141748606 CDS
T11135
Symbol
THSD4
Name
(RefSeq) thrombospondin type-1 domain-containing protein 4 isoform X1
KO
K23377
thrombospondin type-1 domain-containing protein 4
Organism
lmic Larus michahellis (yellow-legged gull)
Pathway
lmic04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
lmic00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
141748606 (THSD4)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
lmic04990
]
141748606 (THSD4)
Domain-containing proteins not elsewhere classified [BR:
lmic04990
]
Thrombospondin domain-containing proteins
ADAMTS-like proteins
141748606 (THSD4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TSP1_ADAMTS
ADAMTS_spacer1
TSP_1
ADAMTS_CR_3
TSP1_spondin
PLAC
TSP1_CCN
Motif
Other DBs
NCBI-GeneID:
141748606
NCBI-ProteinID:
XP_074457056
LinkDB
All DBs
Position
9:complement(16737638..17040494)
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AA seq
1027 aa
AA seq
DB search
MVDSLIVSLRLLGSLAVLGFQFVIPQPSIEHRKVPQRIEEQSDAPEDSSGGIPGMWGSWG
PWSACSRSCSGGVMEQTRPCLPAYYRERGYRRPGRQYPASERTLAHQNARHHEDSLTAYP
GHVISAIRTSVPLHRNEEQLWAGLRAPAPSGGGNTSQLSRGALRGSRHSQSQRQNAKPEK
RSRNRNPIGPGKYGYGKVPYILPLQTDTGQQPQKLRRQRQSSRNHVFHQNPSLMNTYSQA
ASPSLQHGNLYQEESGTQAGHQVLGPSVYQSSSFPVSQSLFHSSDSSHHGSASHQALQGQ
PQPQRAAAIVCVGAYKQYKLCNTNMCPESSRNIREVQCASYNNKPFMGRFYEWEPFAEVK
GSQKCELNCRAIGYRFYVRQAEKVIDGTPCDQNGTAICVAGQCKSIGCDDYLGSDKVIDK
CGICGGDNTACKVVSGVFKHTLTNLGYHKIVEIPEGATKINITEMSKSNNYLALRSRSGR
SIINGNWAIDRPGRYEGGGTMFTYKRPNEISSTAGESFLADGPTNEVLDVYMIHQQPNPG
IHYEYIIPGDNVISPQLLAHRRPGEPLNGQLGMPESTNHEDEDLHRETDTLTGQSAGTFP
VIQPGRFPSHQPENQVPAVQPPRQNREYNWKQIGKTECTTTCGKGSQYPVFHCVNRITHE
EVSESYCDSSTKPIPEEEACNLFPCPAFWDIGEWSECSKTCGLGMQHRQILCRQMYANRT
LTVQQYRCHHLEKPETTSTCQLKICSEWQIRTEWTSCSVPCGVGQRTRDVKCVSNLGDIV
DDEECNMKLRPNDIENCDMGPCAKSWFLTEWSDRCSAECGDGVRTRSVVCMTNHVSSLPL
EGCGNNRPSETTSCNNGPCAGKVEWFAGGWTQCSTECGSGTQQREVICVRKTEGNFDVLN
PYDCSYLEKPPSQQSCYLKPCGSKWFHTEWSTCSKSCEGGFRVREVRCLSDDMTASTQCD
PQLKPEEKEPCNTQDCIPEIDENCKDKYYNCNVVVQARLCVYTYYKTACCASCTRVANRQ
PGFLGRR
NT seq
3084 nt
NT seq
+upstream
nt +downstream
nt
atggtagacagcttaatagtttctttaagacttctcggctccttggcagtgctgggattt
cagtttgtcatccctcagccttcaattgaacacagaaaggttccccagaggatagaagag
caaagcgatgcaccggaggatagcagcgggggaatcccaggcatgtggggcagctggggc
ccctggtctgcctgctctcggagctgcagtggtggggtgatggagcaaacgcggccatgc
ctcccagcctattatcgggaaaggggctaccggcggccgggccggcagtacccggcctca
gagaggactctggctcatcagaatgctcgccaccacgaggactcgctgactgcctatcct
ggccatgtcatttctgccatccgcacatctgtgccgcttcacaggaatgaggagcagctt
tgggctggccttcgggccccagctccttctggaggcggaaacaccagccagctgagcagg
ggggcgctgaggggcagcaggcactcccagtcccagaggcagaacgccaagccagagaag
agaagcagaaacagaaatcctattggtccaggaaagtatggatatggaaaagtcccatac
attttacctttacaaactgatactggtcagcagcctcagaaacttcggaggcagcgacag
tcatcaaggaaccacgtatttcatcagaatccaagcctcatgaacacttacagccaggca
gctagtccttcgcttcaacacgggaatctttatcaagaagaaagtgggactcaggctggg
catcaagtcctgggaccctcagtttatcagtcatcatcgttccctgtgtcgcagagcctg
tttcacagcagtgactccagccatcacgggtctgcgtcacaccaggccctccagggccag
ccccagcctcaaagggctgcagcaattgtgtgcgttggcgcctacaagcaatataagctc
tgcaacacaaacatgtgtcccgaaagcagcagaaatattagagaggtgcaatgtgcatca
tacaataacaagccatttatgggtcgattttatgaatgggaaccttttgcagaagtgaag
ggaagtcagaagtgtgagctgaattgccgtgcgataggctaccgattctacgtgcggcaa
gctgagaaggtgatcgatgggacgccctgtgaccagaacgggactgccatctgcgtggcc
gggcagtgcaagagcattggctgtgacgactatttgggttcagacaaggtgattgacaag
tgtggaatatgcggaggggacaacactgcttgcaaggttgtgtccggagttttcaaacac
acgctaacaaatctcggctaccacaagatagtggaaattcccgaaggagctactaaaatc
aacattactgagatgtcaaagagcaacaactatttggcgttgcggagtcgatcaggacgg
tccatcatcaatggaaactgggcaattgatcgacctgggagatatgaaggtggtgggaca
atgttcacttataaacgcccaaatgaaatctccagcactgcaggagagtcatttttagct
gatggtccaacaaatgaagtccttgatgtctatatgatacatcagcagcctaacccaggt
atacattatgagtatatcattccaggagacaatgtcattagccctcagttgcttgctcac
aggaggccaggggagcccttgaatggtcagctaggaatgccagaaagtacaaatcacgag
gatgaggatttgcacagggagacagacactctcactggacagtcagctggaacttttcca
gttattcagccaggaagatttccttctcatcagccagaaaaccaggtgcctgctgtgcaa
ccaccaagacaaaaccgagaatacaactggaaacagattggaaaaaccgagtgcacaact
acatgtgggaaagggtcacagtacccagttttccactgcgtcaacagaatcactcacgag
gaggtatctgagagttactgtgacagcagcaccaaacccattccagaagaggaggcctgc
aacctcttcccatgtccagctttctgggatataggggagtggtccgagtgcagcaaaaca
tgcggccttggtatgcagcatcgacagatcttgtgccggcaaatgtatgccaaccgtacc
ttgacggttcagcagtaccgctgtcatcacctggagaaaccagagacaaccagcacgtgc
cagctgaagatctgcagtgaatggcagattaggacagagtggacttcatgctcggtgcct
tgtggagtggggcagaggacccgagatgtgaaatgcgttagcaaccttggggacattgtt
gatgatgaggaatgtaacatgaagctgcggccgaatgacattgagaactgcgacatgggt
ccctgtgctaagagctggttcctgacagagtggagtgacaggtgttctgcagaatgtggt
gacggcgtccgtacgcgttcagtggtttgtatgacgaaccatgtcagcagtttgcctctg
gaaggctgcggcaataacagaccctctgaaacaacttcctgtaataatgggccctgtgct
ggtaaagtggagtggtttgctgggggctggacacagtgctctactgaatgtggcagtgga
actcaacagagagaagtaatttgcgttaggaaaactgaaggtaattttgatgttttgaac
ccctatgactgttcatatttggaaaaacctcccagccaacaatcctgctacctcaaaccc
tgtggatctaagtggtttcatacagaatggagcacatgttccaaatcctgtgaaggagga
tttcgggttcgagaggtacgatgtctatcggatgacatgacagccagtacgcagtgtgat
ccacagcttaagcctgaagaaaaagaaccatgtaacacgcaagattgtatccctgaaata
gatgagaactgcaaagataagtactacaattgcaatgtggtggttcaggcccggctctgt
gtctacacctattacaaaacagcctgctgtgcatcctgtacccgtgtggcaaacagacaa
ccagggtttctaggacgcagataa
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