Larus michahellis (yellow-legged gull): 141748926
Help
Entry
141748926 CDS
T11135
Symbol
THOC2
Name
(RefSeq) THO complex subunit 2 isoform X1
KO
K12879
THO complex subunit 2
Organism
lmic Larus michahellis (yellow-legged gull)
Pathway
lmic03013
Nucleocytoplasmic transport
lmic03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
lmic00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
141748926 (THOC2)
09122 Translation
03013 Nucleocytoplasmic transport
141748926 (THOC2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lmic03019
]
141748926 (THOC2)
03041 Spliceosome [BR:
lmic03041
]
141748926 (THOC2)
Messenger RNA biogenesis [BR:
lmic03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
141748926 (THOC2)
Spliceosome [BR:
lmic03041
]
Complex C
Other components
EJC/TREX
141748926 (THOC2)
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
141748926 (THOC2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tho2
THOC2_N
Thoc2
Motif
Other DBs
NCBI-GeneID:
141748926
NCBI-ProteinID:
XP_074457767
LinkDB
All DBs
Position
9:39948466..40002059
Genome browser
AA seq
1608 aa
AA seq
DB search
MAALLPAEWIKNWEKGGKNEFVQLCRALSENKSHDNMGFRDIQQALYELAYHVVRGNLKH
DQASNVLGDIIEFREDMPSILADVFCILDIETSCLEEKNKRDHFTQLVLACLYLVSDTVL
KERLDPETLESLGLIKQSQQFNQKSVKIKTKLFYKQQKFNLLREENEGYAKLIAELGQDL
SGNITSDLILENIKSLIGCFNLDPNRVLDIILEVYECRPEYDDFFVPLIESYMYMCEPQT
LCHILGFKFKFYQDPSGETPSSLYRVAAVLLQHNLIDLEDLYVHLLPGDNAIIEEHKREI
VEAKQIVRKLTMVVLSSEKTEEKEKEKEKEEEKTEKPPDNQKLGLLEALLKIGDWQHAQS
IMDQMPPFYATSHKPIAIALCQLVHVTIEPLYRRVGVPKGAKGSPISSLPNKRAPKQADS
FEDLRKEVFNMLCYLGPHLSHDPILFAKVVRLGKAFMKEVGTMKKFVSDRMVKFQSDGSK
QEDREKMDILFSCLLSITDQVLLPSLSLMDCNACMSEELWGMFKTFPYQYRYRLYGQWKN
ETYNSHPLLVKVKAQTIDRAKYIMKRLTKENVKPSGRQIGKLSHSNPTILFDYILSQIQK
YDNLITPVVDSLKYLTSLNYDVLAYCIIEALANPEKERMKHDDTTISSWLQSLASFCGAV
FRKYPIELAGLLQYVANQLKAGKSFDLLILKEVVQKMAGIEITEEMTMEQLEAMTGGEQL
KAEGGYFGQIRNTKKSSQRLKDALLDHDLALPLCLLMAQQRNGVIFQEGGEKHLKLVGKL
YDQCHDTLVQFGGFLASNLSTEDYIKRVPSIDVLCNEFHTPHDAAFFLSRPMYAHHISSK
YDELKKAEKGNKQQHKVHKYITSCELVMAPVHDAVISLHLPKVWDDISPQFYATFWSLTM
YDLAVPHSSYDREVNKLKVQMKAIDDNQEMPPNKKKKEKERCTALQDKLLEEEKKQLEHV
QRVLQRLKLEKDNWLLAKSTKNETITKFLQLCIFPRCIFSAIDAVYCAHFVELVHQQKTP
NFSTLLCYDRVFSDIIYTVASCTENEASRYGRFLCCMLETVTRWHSDRVIYEKECGNYPG
FLTILRATGFDGGNKADQLDYENFRHVVHKWHYKLTKASVHCLETGEYTHIRNILIVLTK
ILPWYPKVLNLGQALERRVHKICQEEKEKRPDLYALAMGYSGQLKSRKPFMIPENEFHHK
DPPARNAVAATVQNGPGGAGMPTSLTINTVRLEEGTTEETDKLKEKSQGVVKVINKTVNA
TPKVTTSNGNSASNSKIIKEKDDKEKSGKEKDKEKKDKTPAATPEMKALGKDGKDKPKEE
RANKDDKAREIKEKTPKSDKEKEKVKKEEKASKEEKSKTVVTIVESKSTAEKEREKEPSR
ERDVAKEIKSKENAKGGEKMPVAGSLKSPVPRSETSESEREQKRRKVDTHSSPSHSSTVK
DSLNELKDSSAKHYINHTTPTLSKSKEREVDKKDLDKSRERSREREKKDEKDRKDRKRDH
SNSDREVPQDSTKRRKEENGTTGSSKHSKSESPSDSPRLNEKEKEKNKSKSSGKEKGDSI
KAEKMEKSSSGSKKESRHDKEKTEKKEKRDSTGGKEEKKHHKSSDKHR
NT seq
4827 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgctgctccctgccgagtggataaagaactgggagaaagggggcaagaacgag
tttgtgcaactatgtcgcgctctcagtgaaaacaaaagccatgataatatgggtttcaga
gatatccaacaggctttgtatgagcttgcataccatgttgtcagaggaaacttaaagcat
gatcaagcttctaatgttctcggtgatatcatagaatttcgggaagacatgccttccatt
ctagctgatgtattctgcatattagatattgaaacaagttgtttagaagaaaagaacaag
agggatcattttacccaactggtattagcctgtttgtatcttgtatctgacactgtccta
aaggagcgtttagatccagagacactggagtcattaggacttatcaagcagtctcaacag
ttcaatcagaaatctgttaaaataaagacaaaactattttataagcaacagaagtttaat
ttgttaagagaggagaatgaaggttatgcaaagctcattgcagaacttgggcaagactta
tctggaaatatcactagtgatttaatccttgaaaatatcaaatctttaataggatgtttt
aaccttgatccgaacagagttttggatattatcctagaagtctatgagtgcaggcctgag
tatgatgacttctttgtaccactgatagagtcttacatgtacatgtgtgaacctcaaact
ctatgccatatccttgggttcaaattcaaattttatcaggatccaagtggtgagacacct
tcctccttatacagagttgctgctgtccttttgcaacataatctcatagatttggaagac
ctttatgttcatcttcttccaggggataatgccatcattgaggaacacaagcgagagata
gtggaagcaaagcaaattgtcagaaaacttacaatggttgtcttatcctctgaaaagact
gaggaaaaggagaaggaaaaagaaaaagaagaggagaaaactgaaaagcctcctgataat
caaaagcttggtttattggaagctttattaaaaattggtgattggcagcatgcacaaagt
attatggatcagatgcctccgttttatgctacttcacacaagcctattgcaattgccctt
tgccaacttgtacatgtgacaattgaaccactgtaccgcagagttggtgtacctaaagga
gctaaagggtcaccaatttcttctttgccaaacaagagagcaccaaaacaagcagacagc
ttcgaggacttgaggaaggaagtgttcaacatgctttgttatcttggtcctcacctctcc
catgatcccattttatttgcgaaagtggtgcgccttggaaaagcatttatgaaagaggtt
gggactatgaagaaattcgtcagtgacagaatggttaagtttcagtctgatggaagcaag
caagaagacagagagaaaatggacatactgtttagctgtttgttgagtattaccgatcaa
gttttacttccgtctctttctttgatggactgcaatgcatgcatgtctgaggaattatgg
ggaatgttcaaaacttttccgtaccaataccggtaccgtctttatgggcaatggaagaac
gaaacatacaatagtcacccacttctagtgaaagttaaagctcaaaccatagaccgagcc
aaatatatcatgaagcgtttaactaaggaaaatgtgaaaccctctggaagacaaattggg
aagctcagccacagcaatcctacaattttatttgattatattctatcacaaatacaaaaa
tacgataacttaataactccggttgttgattcactgaaatacctcacttcgctgaactac
gatgtcttggcatactgtataattgaagctctggcaaaccccgagaaggagagaatgaag
catgatgacactacaatctcgagctggctgcagagtctggctagcttttgtggtgcagtt
ttccgaaaatacccaattgaacttgctggtctacttcaatatgtagccaaccaactgaaa
gctgggaaaagctttgatttgcttattttaaaagaggtagtgcagaaaatggcagggata
gaaattacagaagaaatgacaatggaacaattagaagccatgactggtggagaacaacta
aaagctgagggtggatactttggccaaatcaggaatacaaagaaatcttctcagagattg
aaagatgcattgttggaccatgatcttgcccttccactctgcctgcttatggctcaacag
agaaatggtgtgatctttcaagagggaggggaaaaacatctgaagctggtgggaaaactg
tatgatcagtgccatgataccctggtacaatttggtgggtttttagcatccaatctcagc
acagaggattacattaagcgagtgccttctattgatgttctctgtaacgagtttcacaca
cctcacgatgctgcatttttcctctcaagacccatgtatgcacaccatatttcatcgaag
tatgatgaactaaaaaaagctgagaagggaaataaacagcagcacaaagttcacaaatac
attacatcgtgtgagctggtgatggctcctgttcatgatgctgtgatttctctgcacctt
cccaaggtttgggatgacatcagtcctcagttttatgctacattctggtctttgacaatg
tatgaccttgccgtcccacatagtagctatgacagagaagtcaataaacttaaagtccag
atgaaagccatagatgacaatcaggaaatgcctccaaataaaaagaaaaaagaaaaagaa
cgttgcacagctcttcaggacaagctccttgaagaggagaagaaacagttggagcatgtg
cagagggttctacagagactgaaactagagaaggataactggctcctggcaaagtctacc
aaaaatgagactatcacaaaatttttgcaattatgtatatttcctcgatgcattttttcg
gcaatcgatgcagtttactgcgctcactttgtagaactggtgcatcaacagaaaacaccc
aatttctccacgcttctctgctatgacagagttttctctgatattatatatacagttgca
agttgcactgaaaatgaagctagtaggtacggcaggtttttatgttgtatgctggagact
gtgactagatggcacagtgacagagttatatatgaaaaggaatgtggcaactatccaggc
ttcctaactatattacgggcaactggatttgatggtggaaataaagctgatcaattggat
tatgagaattttagacatgtggtacacaaatggcactataaattaactaaggcttctgtg
cactgccttgaaacaggtgaatatacacatatcagaaatatcctgattgtgctgaccaaa
atccttccgtggtatccaaaagtgctgaacctgggacaagcattggaaagaagagtgcat
aagatatgtcaggaagagaaagagaagagacctgatctatatgcattggctatgggctat
tctgggcagttgaaaagtaggaagccgttcatgatacctgaaaatgaattccaccacaaa
gacccacctgccaggaatgctgtagctgcaacagtacaaaatgggccaggtggtgctggg
atgcctacatctctcacaataaatacagttagactggaagaaggcactactgaggagact
gataaactaaaggagaagtctcagggtgtggtgaaagttattaataaaactgtcaacgct
acaccaaaggtgacaacaagcaatggaaacagtgcttctaatagcaaaattattaaagag
aaagatgataaagaaaaaagcgggaaggagaaagataaagaaaaaaaagacaagactcca
gctgccactccagagatgaaggcacttgggaaggatgggaaagataaaccaaaggaagaa
cgggcaaacaaagatgataaagcaagagagatcaaggagaaaacgccaaaatctgacaaa
gagaaggaaaaagtcaagaaagaagaaaaagcttcaaaagaagaaaaatccaagacagtt
gttaccatcgttgagtcaaagtcaaccgcagaaaaggagagagaaaaggagccgtccaga
gaaagagatgtagcgaaggaaattaaatccaaggaaaatgctaaaggaggagaaaagatg
ccagtagctgggtccttgaagtcacctgttccccgatcagaaacatcagaatctgagagg
gaacaaaaacgccgcaaagttgatacacactcttctccatcacattcctcaacagtaaag
gacagcctcaacgaactcaaggactcttcagcaaagcactacattaaccacactactcca
acactgtccaagagtaaggagagagaagtggacaagaaagatttggacaagtcaagggaa
agatccagagagagagagaagaaagatgaaaaggacaggaaagatcgaaaaagggatcat
tcaaacagtgaccgagaggtaccacaggattcaactaaacgacgcaaagaggaaaatggg
acaactggctcttcaaaacatagtaagagtgaaagtccttctgattcccctcgcttaaat
gaaaaggagaaggagaagaacaaatcaaagtcttcaggaaaagagaaaggtgattcaatt
aaagcagaaaagatggagaagagctcctctggtagcaaaaaggaatcaagacatgataaa
gaaaaaacagaaaagaaagaaaaacgagacagtactggagggaaagaagaaaagaagcat
cataaatcttcagacaagcacagataa
DBGET
integrated database retrieval system
