Larus michahellis (yellow-legged gull): 141749671
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Entry
141749671 CDS
T11135
Symbol
SOX30
Name
(RefSeq) transcription factor SOX-30
KO
K09271
transcription factor SOX15/30
Organism
lmic Larus michahellis (yellow-legged gull)
Brite
KEGG Orthology (KO) [BR:
lmic00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lmic03000
]
141749671 (SOX30)
Transcription factors [BR:
lmic03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
141749671 (SOX30)
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GFIT
Motif
Pfam:
HMG_box
HMG_box_2
Motif
Other DBs
NCBI-GeneID:
141749671
NCBI-ProteinID:
XP_074459648
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Position
11:complement(20564657..20573195)
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AA seq
661 aa
AA seq
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MERGARAAPLRSGAPRETPSGLRRPTPPPTPQGEAEVPLRVVRVKMEKPEPAEGNVPRCR
GDSRESGGDFRRFPAPWWGKEESHVTIKKEGEQEGGGRESPKEVKVPEKRGNGKEPWRGA
DVKAEPPHEAFEACGVKEEKGVAPVGSLCGPAHASPGDHKTQQNGGLGILPEDLKIPVVF
HPLPPGTRIQIQGPLPSELIHVTKVPVKQVPLKMQSLLEPSVKIETKNVPLTVLPSDSGM
PDTPFSKDKNGHVKRPMNAFMVWARIHRPALAKANPAANNAEISVQLGLEWSKLTEEQKQ
PYYDEAQKIKQRHREEFPGWVYQPRPGKRKRFPLPVSGVFSGTSQSIITTSPAGICPFQS
PAYSVVIPNVKNSIGHPVCEAPSAIRLPASSIQHAGPVTLFQTTSARTPSVAVPAPTLPL
RPIISPQHFAEPAQAEALDGLNCSLKRRTPVFIESRNPSNITTTNSRFSVSTSEPPKEYP
GVSIFPRGVPLPQATPFLHSRLYESPPIGQTASLFGVPPRFPFYHPYFVPGPHYFPSSTC
PFSRPPFGCGNFSSSVSQCLGCYEDRYQRQEVMFSALDGNYPFKEYSEEHIREDHRSCES
LEVVSCYSSCNEERYLSPLPQLDVGELEEVLSATPSTPSSIHLINVIDSDEEDEVKLLRE
L
NT seq
1986 nt
NT seq
+upstream
nt +downstream
nt
atggagcggggcgccagggcggcaccgctccgctccggggctcctcgggagaccccatcg
ggcctccgccgccccacgccgccgcccaccccgcagggggaggccgaggtccccctcagg
gtggtgcgcgtcaaaatggagaaacccgagccggcggagggaaacgtccccagatgccgc
ggggacagcagagagtcggggggtgatttcaggcgcttcccagctccatggtgggggaaa
gaagagtcccacgtcaccatcaagaaagaaggggagcaggaagggggtggcagagaaagc
cccaaggaggtgaaggtgccggagaagagggggaacgggaaggagccctggagaggagct
gatgtcaaagcggagccgcctcatgaggcctttgaggcctgcggggtgaaggaggaaaag
ggtgttgccccggtgggctccctgtgtgggcctgctcatgccagcccaggtgaccacaag
acgcagcagaatggggggcttgggatccttcctgaagatctgaagatcccagttgtgttt
caccccttacctcctgggacccgcatacagatccaaggccctctgccgtcagagctgatc
catgtgactaaagtgccagtgaaacaagtgccgcttaaaatgcagtctttactggagcct
tcagtaaagattgaaactaaaaatgttcccctcacagtactgccctccgattcaggtatg
ccagatactccatttagcaaggacaaaaatggccatgtaaagcgtccaatgaacgcattt
atggtgtgggctaggattcatcggcctgccctagcgaaagctaacccagctgccaataat
gcagaaatcagtgttcagcttggactggagtggagcaaactgactgaagagcagaaacag
ccctattatgatgaagcccagaaaataaaacaaaggcacagagaggaatttcctggttgg
gtttatcaaccacgaccaggcaaaaggaagcgtttcccactgcctgtctctggtgtattt
tccggcacttctcagagtatcatcactacaagtccagctggcatttgtcccttccagtca
cctgcttactctgttgtcatccccaatgttaagaacagtattggacatccagtctgtgaa
gctccttctgccatccgtctgccggcttcttccattcaacatgctggtccagttactctt
ttccagactaccagtgcaagaaccccatcagtggctgttccagctccaaccctgcccttg
cgccctataatttcaccacagcactttgctgaacctgctcaggcagaagctcttgatggg
ctcaattgctctctgaagagacgtacaccagttttcattgagagcagaaatccaagtaac
ataaccaccactaacagcagattttctgtctctactagtgagcccccaaaggagtaccca
ggggtttctatttttcctagaggtgtacctcttccccaagctaccccttttcttcactca
cgtctctatgagtctcctcccattggtcagacagccagtctgttcggagtacctcctcgg
tttccattttaccacccttattttgtacctggacctcactatttcccttcaagcacatgc
ccattcagccgacctccatttggctgcgggaatttctccagctcagtgtctcaatgcctt
ggctgttatgaagacaggtaccaaagacaggaggtgatgttttcagctctggacggaaac
tatcctttcaaggaatactcagaagaacatatacgtgaggaccaccgcagctgtgagagc
cttgaagtagtgtcctgttacagcagctgcaacgaggagcggtatttaagccccctaccg
cagctggacgttggagagttggaggaggttttgtcagccaccccatctactccctccagc
atccacctaatcaacgtaattgacagcgacgaggaagacgaagtaaagttgttgcgagaa
ttgtaa
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