Larus michahellis (yellow-legged gull): 141751691
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Entry
141751691 CDS
T11135
Symbol
WHRN
Name
(RefSeq) whirlin isoform X1
KO
K21879
whirlin
Organism
lmic Larus michahellis (yellow-legged gull)
Brite
KEGG Orthology (KO) [BR:
lmic00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
lmic03037
]
141751691 (WHRN)
Cilium and associated proteins [BR:
lmic03037
]
Primary cilia and associated proteins
USH complex and associated proteins
141751691 (WHRN)
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Ortholog
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GFIT
Motif
Pfam:
PDZ
PDZ_6
PDZ_2
HHD_RTEL1
DUF6288
USH1C_N
PAH_ZNF598
Motif
Other DBs
NCBI-GeneID:
141751691
NCBI-ProteinID:
XP_074464960
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All DBs
Position
15:complement(4293194..4350697)
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AA seq
933 aa
AA seq
DB search
MSAELDGVSVHSSSSSSGSLGSAAGAAAVGLVPVPRPLSANVRRLHQALTALLTEAERER
FILCLNAYHGRRNVCDLVRSLRALLDGPRRRQLLPLLRLVLPRSDQLLFDQYTAEGPYLP
PPAPAPPPVVPGELRQVTLRRSKAHEGLGFSIRGGAEHGVGIYVSLVEPGSLAEREGLRV
GDQILGVNGKSLDRVTHAEAVKVLKGCKKLNLSVHSVGRIPGGYVTNHIYTWVDPQGRSV
SPPTGLPHHQNSSLRKDSEKRSHLQLLQEGDEKKVNLVLNEGKSLGLMIRGGAEYSLGIY
ITGVDKGSEAESTGLKVGDQILEVNGRSFLSIPHDEAVKLLKSSRHLIMTVKDIGRLPHA
RTTVDETRWIASSQIGETLVNSAGAVGNHAAEATARPMFYRGLAGSQVTLSSMVNQTRVM
LEEQARHLLNEQERATMGYYLDEYKEGNISVDALVMALFELLNTHAKFSLLSEVRGVISP
QDLDRFDNLVLKREIESMKARQPSGPSIGTDSYSMMSYSDTVSSSSSHFTATTVSSARER
LLWLIDLMENTSELEGGGDGHQSSINTLPDISLDDLSSFPDEPPNFKPPPPPSAPQMLDP
SAAQHRNPGKDKPKRPSSESSQSGLFFVAPRNPTPPPSLPEKDTVSVTSTATTSTEDSAP
SAIYATISPALHGSRRQMDAHLSLVNQHPIGPFPRVQSPTRLKSPSPEGPAAGGLQSPPS
PSPPPPPSHPAPPPPDKGSPQAVANQHFIMVEVHQPNSEPDVNEVRPLPQARASTLSQLS
DSGQTLSEDSGVDIGEVEMSGKDKSRQPVPGKSRSLKEATRNEGAAEGASKPPGLLEPTS
CLIRVSKSAPTLGIAIEGGANTRQPLPRIVTIQRGGSAHNCGKLKVGHVILEVNGTGLRG
KEHREAARIIAEAFKLKEKDYIDFLVTEFNVAL
NT seq
2802 nt
NT seq
+upstream
nt +downstream
nt
atgagcgcggagctggacggcgtgtcggtgcactcttcctcctcctcctcgggctcgctg
ggctcggcggcgggggcggcggcggtggggctggtgccggtgccccggccgctgtcggcc
aacgtgcggcggctgcaccaggcgctgacggcgctgctgaccgaggcggagcgggagcgc
ttcatcctctgcctcaacgcctatcacggccgccgcaacgtctgcgacctggtgcgctcc
ctccgcgccctcctcgacgggccccgccgccggcagctcctgccgctgctccgcctcgtc
ttgccgcgctccgaccagctcctcttcgaccagtacaccgccgaggggccctacctaccc
cccccggcccccgccccgccgccggtggtccccggtgagctgcggcaggtgaccctgcgg
cggagcaaggcccacgagggcctgggcttcagcatccgcggcggggccgagcacggcgtg
gggatctacgtctcgctggtggaaccgggctccttagccgagcgggaggggctgcgcgtc
ggcgaccagatcctgggtgtcaacggcaagtccttggaccgggtgacccacgccgaggct
gtcaaggtgctgaaaggctgcaagaagctgaacctgtctgtacattcggtgggacgcatc
ccggggggctatgtcaccaaccacatctacacctgggtggacccgcagggccggagcgtg
tccccgccgacgggcctgccgcaccaccagaacagctccctccgcaaggacagcgagaag
aggagccacctccagctcctgcaagagggagatgagaaaaaggtgaatctggtcctgaat
gaagggaaatccctgggcctcatgatccgaggaggggcagaatattccctgggcatctac
atcaccggtgtggataaaggttctgaagcagagagcactggcttgaaggtaggagaccag
atcctggaggtgaacggcaggagcttcctcagcatcccccacgacgaggcggtgaagctg
ctcaagtcttcccgccacctcatcatgacggtgaaggacatcgggaggctgccccatgcc
cgtaccaccgtggacgagaccaggtggatagcaagctcccagatcggagagaccctcgtc
aactcagcaggggcagtgggcaaccatgctgcggaggcgacagccaggcccatgttttac
cgggggctggccggctcccaggtaacgctgagcagcatggtgaaccagacccgagtcatg
ctggaggagcaggcacggcacctgctgaatgaacaggagcgggcgaccatgggctactac
cttgatgagtataaggaaggcaacatctccgtggatgctctggtcatggcgctcttcgag
ctactcaacacacatgctaagttctcactgctttcagaggtgcggggtgtgatctccccg
caagacctcgaccgcttcgacaacctggtgctgaagagagagatcgagtccatgaaggct
cgacagccctcggggcccagcatcggcaccgactcctactctatgatgtcctacagcgac
accgtctcttcctccagcagtcacttcactgccacaaccgtcagctcggcccgggagcga
ctcttgtggctaatagacctgatggagaacacgtcggaattggagggaggtggagatggc
caccaaagtagcatcaacaccctgccggacatctccctggatgatctctcctccttccca
gatgaaccgcccaacttcaagcctccgcctcctccttcagcccctcagatgctggaccca
tccgctgcccagcacaggaacccagggaaagacaagcccaagcgcccttcctccgagtcc
tctcagtcaggcctcttcttcgtagccccccgaaaccccacgccccctcccagcctcccc
gagaaggacacagtcagcgtgacctccactgctaccacgtccaccgaggattctgcccca
agcgctatctatgctaccatttccccagccctgcatggctccaggaggcaaatggatgcc
cacctctccctggtcaaccagcaccccattggtcccttccccagggttcagtccccaaca
aggttgaagagcccatccccagagggccctgcagccggtgggcttcagagccccccttcc
ccatcccctcctcctcccccatcccacccggcaccccctccaccagacaagggcagcccc
caggccgtggccaaccagcatttcatcatggtagaggtgcaccaacccaacagcgagccc
gacgtcaatgaagtgaggcctttgccccaggccagagcctccacgctctcccagctgtcg
gacagcgggcagaccctcagcgaggacagcggggtggacatcggggaggtggagatgagc
ggcaaggacaagagccggcagccggtccctgggaaaagccgaagcctcaaggaggcgacg
aggaacgagggggcggcagaaggggcttccaagccgccagggctcctggagcccacgtcg
tgtctcatccgagtgtccaagagcgcaccgaccttggggatcgccatcgagggtggagca
aacacgcggcagccgctgccccgcatcgtcaccatccagcgcggaggttcggcgcacaac
tgcgggaagctgaaggtgggccacgtcattttggaggtgaacgggacggggctgcggggc
aaagagcatcgggaagccgcccgtatcatcgctgaagcctttaagctgaaggaaaaggac
tacatcgatttcttggtcacagaattcaacgtcgcgctttag
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