Larus michahellis (yellow-legged gull): 141751714
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Entry
141751714 CDS
T11135
Symbol
GRIN1
Name
(RefSeq) glutamate receptor ionotropic, NMDA 1 isoform X1
KO
K05208
glutamate receptor ionotropic, NMDA 1
Organism
lmic Larus michahellis (yellow-legged gull)
Pathway
lmic04020
Calcium signaling pathway
lmic04080
Neuroactive ligand-receptor interaction
lmic04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
lmic00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
141751714 (GRIN1)
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
141751714 (GRIN1)
04082 Neuroactive ligand signaling
141751714 (GRIN1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
lmic04040
]
141751714 (GRIN1)
Ion channels [BR:
lmic04040
]
Ligand-gated channels
Glutamate (ionotropic)
141751714 (GRIN1)
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Gene cluster
GFIT
Motif
Pfam:
Lig_chan
ANF_receptor
Lig_chan-Glu_bd
SBP_bac_3
Ion_trans_2
Peripla_BP_6
Rap-GAP_dimer
DUF6724
Motif
Other DBs
NCBI-GeneID:
141751714
NCBI-ProteinID:
XP_074465010
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Position
15:complement(2274189..2314049)
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AA seq
1070 aa
AA seq
DB search
MSTMRLLLLALLFSSSFARAGCDPKIVNIGAVLSTKKHEQIFREAVNQANKRHGTWKLQL
NATSVTHKPNAIQMALSVCEDLISSQVYAILVSHPPAPNDHLTPTPVSYTAGFYRIPVIG
LTTRMSIYSDKSIHLSFLRTVPPYSHQANVWFEMMRVFNWNHVILIVSDDHEGRAAQKKL
ETLLEEKESKSKKRNYENLDQLSYDNKRGPKAEKVLQFDPGTKNVTSLLLEAKELEARVI
ILSASEDDAATVYRSAAMLNMTGSGYVWLVGEREISGNALRYAPDGVIGLQLINGKNESA
HISDAVAVVAQAVHDLFEKENITDPPRGCVGNTNIWKTGPLFKRVLMSSKYSEGVTGRVE
FNEDGDRKFANYSIMNLQNRKLVQVGIYNGSHVLTNDRKIIWPGGETEKPQGYQMSTKLK
IVTIHQEPFVYVKPTQADGTCREEFTINGDPVKKVFCTGPNETIPGRPTVALCCYGFCID
LLIRLAGVMNFTYEVHLVADGKFGTQERVNNSNKKEWNGMMGELLSGQADMIVAPLTINN
ERAQYIEFSKPFKYQGLTILVKKEIPRSTLDSFMQPFQSTLWLLVGLSVHVVAVMLYLLD
RFSPFGRFKVNSEEEEEDALTLSSAMWFSWGVLLNSGIGEGAPRSFSARILGMVWAGFAM
IIVASYTANLAAFLVLDRPEERITGINDPRLRNPSDKFIYATVKQSSVDIYFRRQVELST
MYRHMEKHNYESAAEAIQAVRDNKLHAFIWDSAVLEFEASQKCDLVTTGELFFRSGFGIG
MRKDSPWKQNVSLAILKSHENGFMEDLDKTWVRYQECDSRSNAPATLTFENMAGVFMLVA
GGIVAGIFLIFIEIAYKRHKDARRKQMQLAFAAVNVWRKNLQRELRRRSKCIPEHALRTS
GIHFGYPRAVAEPDLVTPSPVGKVTLIGTKAIGEESFSAPAAERGRSPRLAAPAPWRLVL
PACANQDRKSGRAEPDPKKKATFRSITSTLASSFKRRRSSKDTPCRMVPQECQRDRLAPW
SQDSPGKLPPHSERPSAHHHPSCTASPRHIIPTAPGGDACVPHRQLLQLE
NT seq
3213 nt
NT seq
+upstream
nt +downstream
nt
atgagcaccatgaggctgctgctgctcgccctgctcttctcttcctccttcgcccgcgcc
ggctgcgaccccaagatcgtcaacatcggcgcggtgctgagcaccaagaagcacgagcag
atcttccgcgaggcggtgaaccaggccaacaagcggcacggcacctggaagctccagctc
aacgccacctcggtcacgcacaagcccaacgccatccagatggccctctccgtctgcgag
gacctcatctccagccaggtctatgcaatattagttagccaccctcctgctcccaacgat
cacctaacaccaacacccgtatcatacacagctggcttctacaggatccctgtcattggt
ctgacaacacgcatgtctatatattctgataagagcatccacctgtcctttttgcgcacg
gtcccaccctactctcaccaggccaacgtctggtttgagatgatgagagtcttcaactgg
aatcacgtcattctgatagtcagtgacgaccatgaaggtcgtgctgctcaaaagaagctg
gagaccctcttggaggagaaagagtccaagagtaaaaaaaggaactatgaaaacctcgac
caactttcctatgacaacaagcgaggacccaaggctgagaaagtgcttcagtttgacccc
ggaaccaaaaatgtgacgtcgctgctgctggaggcaaaggagctggaggctcgtgtcatc
atcctttctgccagtgaggatgatgcggccacggtgtacagatcagcagccatgctcaat
atgacgggctccggctacgtgtggctggtgggggaacgggagatatcgggcaatgccctg
cgttacgcccctgatggagtgatcggtttgcagctcatcaacgggaagaacgagtcagcc
cacatcagcgacgctgttgcggtggtggcccaggctgtgcacgacttgtttgagaaggag
aatatcacagacccgccacggggctgcgtgggcaacaccaacatctggaagacgggaccc
cttttcaagagggtgttgatgtcctccaagtactcggagggtgtcaccggccgggtggaa
ttcaatgaggatggggacaggaagtttgccaactacagcatcatgaacctgcagaatcgg
aaactggtccaagttgggatttacaacggcagccatgtcttgaccaacgaccggaagatt
atctggccagggggagaaaccgagaaacctcaaggctatcagatgtcaaccaaattgaag
atcgtgacgatccaccaagagccctttgtgtatgtgaagcccacgcaagcagatgggacg
tgcagggaggaattcaccatcaatggggatcccgtgaaaaaggtcttttgcactggaccc
aacgagaccatcccaggccgccccaccgtggcactgtgctgctatggattctgcatcgac
ctgctcatccggctggcaggggtgatgaacttcacctacgaggttcacctggtggctgat
ggtaaatttggtacccaagagcgggttaacaacagcaacaagaaagagtggaatgggatg
atgggggagctgctgagcggccaggcagacatgattgtggctcccctcaccatcaacaat
gagcgggcacagtacattgagttctccaagcccttcaagtaccaaggcctcaccatcctt
gtgaagaaggaaatcccccgaagcaccttggactcgttcatgcagcctttccagagcacg
ctgtggctgctggtggggctgtctgtgcacgtggtggcggtgatgttgtacctcttagac
cgattcagcccgtttggccggttcaaagtgaacagtgaggaggaggaggaagatgccctg
accctctcctcggccatgtggttctcctggggagtcctgctgaactccggcatcggagaa
ggtgctccccggagtttctctgcacgtattcttggcatggtgtgggctggcttcgccatg
atcattgtggcttcatacactgccaacctggcagccttcctggtgttagaccggcctgag
gagagaattacaggcatcaacgacccccggctgcgcaacccctctgataagttcatctat
gccacggtgaagcagagctcggtggacatctacttccgaaggcaggtggagctgagcacc
atgtacaggcacatggagaagcacaactacgagagcgctgccgaagccatccaggcagtg
agggacaacaagctccacgccttcatctgggactcagcggtgctggagtttgaagcctcc
cagaagtgtgacctggtgacgacgggggagcttttcttccgctccggctttgggattggg
atgcgcaaggacagcccgtggaagcagaacgtctccctggccatcctcaagtcccacgag
aacggcttcatggaggatttggacaagacttgggtgaggtatcaggagtgtgattcccgt
agcaatgccccagcaacactcacctttgaaaatatggcaggtgtgtttatgctggtggct
ggaggtattgttgccgggatatttttaatattcatagaaatagcttacaaaaggcataag
gacgcgcggaggaagcagatgcagctggcgtttgcggccgttaatgtgtggaggaaaaac
ctgcagagagaactgagaaggaggagcaaatgtatccccgagcatgctctacgcaccagc
gggatacattttggttacccccgtgcggtagcagagccagacctggtcactccgtccccc
gtcggaaaggtcacactcattggcacgaaagcaattggggaggaatcgttctcagcgccc
gccgccgagcgcggccggtcccctcggctcgctgcccccgcaccatggcggctggtgctc
ccagcctgcgctaaccaggatagaaaaagtggtagagcagaacctgaccctaaaaagaaa
gccacttttaggtccatcacctccaccctggcctccagcttcaagagacgtaggtcctcc
aaggatacgccctgcagaatggtccctcaggagtgccagagagacaggctggcaccatgg
agccaagacagccctgggaagctaccaccccactctgaacgtcctagcgcccaccatcac
ccgagctgcacagcctctccgcggcacatcatccccaccgccccaggaggagatgcatgt
gttccccataggcagctcctgcaactcgaatag
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