Larus michahellis (yellow-legged gull): 141751740
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Entry
141751740 CDS
T11135
Symbol
NUP188
Name
(RefSeq) nucleoporin NUP188 isoform X1
KO
K14311
nuclear pore complex protein Nup188
Organism
lmic Larus michahellis (yellow-legged gull)
Pathway
lmic03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
lmic00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
141751740 (NUP188)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lmic03019
]
141751740 (NUP188)
Messenger RNA biogenesis [BR:
lmic03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
141751740 (NUP188)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nup188_N-subdom_III
Nup188_N
Nup188_SH3-like
Motif
Other DBs
NCBI-GeneID:
141751740
NCBI-ProteinID:
XP_074465146
LinkDB
All DBs
Position
15:7764329..7798807
Genome browser
AA seq
1737 aa
AA seq
DB search
MAAGGLCARSSRELWTILLGRSALREPAQIAAELNKHWQRLLEGLSYYKPPSTTSAEKIK
ADKDVAAPLKELGLRVSKFLGLDEEQSVQLLQCYLQEDYRGTRDSLKTVLQDERQSQALM
LKLADYYYEERICILRCVLHLLTYFQDERHPYTAQYFQCVEKLDKELVPNYRKQFEALYK
AEAPTWETHGNLMTERQVSRWFVQCLREQSMLLEVIFLYYAYFEMAPDELLAFAKMFKEQ
GFGTRQTNRHLVDESMDHLVDRIGYFSALILVEGMEIDSLHERALDDRTEEHKLANNERI
HQEMDNQLLQLGDVSHHAPVLLAWALLRHTVNPEESANIIRRMGSTAIQLNVFQYLTKLL
RSLSSGGKNCTASTACMCIYGLLSFVLTSLELHTLGNQQDIIDAACEVLAASSIPQLFWK
TEPTAGLGIILDSVCGMFPHLLTPLLQLLQALVSDKSTAKKVYSFLDKMSFYIELYKHKP
PDVISHEDGTLWRRQAPKLLYPLGLGQTNLRIPQGTVGQVMLDDRAYLVRWEYSYSSWTL
FTCEIEMLLHVVSTADVIQHCQRVKPIIDLVHKVISTDVSIADCLLPITSRIYMLLQRLT
TVISPPVDVIASCVNCLTVLAARMPAKVWTDLHHTGFLPFVANPVSSMNHMISAEGMNAG
GYGNLLMSIEQPQGEYSVTVSFLNLITTLVRGQLGSTQSQGLVPCIVFVLKEMLPNYHKW
RYNSHGVREKIGCLILQLIHAILNLCPEMDPRSSNAPSLQSLCIFSLANTEAGQAVINIM
GIGVDTIDMVMASQSSSDESQGQGQLLIQTVKLAFSVTNNVIRLKPPSSVVSPLEQALTQ
HGAHGNNLIAVLAKYIYHKHDPALPRLAIQLLKRLATVAPMSVYACLGSDAAAIRDAFLT
RLQSKIEDMRIKVMILEFLTVAVETQPGLIELFLNLEVKDGSDGSKEFSLGEWSCLQVVL
ELIDSKQQERYWCPPLLHRAAIAFLHALWQDRRDSAMLVLRTKPKFWENLTNPLFGTLPP
PSESSELSVLDTCALIMKIICLEIYYVVKGSLDQSLKDTLKNFSTKKRFAYWSEYVKLLA
YHVAETEGSSCASVTEYQMLISAWRMLLIISTSHADIMHLTDSAVRQQLFLDVLDGTKVL
LLVPMSVCCLQLGSMLCTLLLILLKQWKSELGSVDKIINSLTQILEGVLQADQQMMEKTK
AKVFSALITVLQMKEMKVNEIPQYSQLVLSVCETLQDEVIALFDQTRHSLTLGDAADDKD
SMETDDASRVKHKDQRDGVCVLGLHLAKELCEVDEDGDYWLQITRKVPVLPTIFAALEIS
LRVKQNLHFTEASLHLLLTLARTQQGAAAVAGAGVTQSVCLPLLSVYQLSSNGAVQTSAS
SRKSLDAPSWPGVYRLSMSLMERLLKTLRYNFLTEALDFVGVHQERILQCLNAVRTVQSL
PCLEEADHTVGFILQLSNFTKEWHFHLPQLMRDMQVNLCYLCQACTSLLHSRKMLQHYLQ
TKNGDSLPSSVTPRVQRNPQASSKHPSPESEAAEEKALLTVQYSLLKILSKTLAALRHFT
PDVCQILLDQSLDLAEYNVLFILSFATPAFDSDVAPCFGTLLATVNVALNTLGELDKKKE
PFPQAAGLNMQEGTKTLKSLLMFTMENCFYLLISQAVRFLRDPAVHPRDKQRMKQELSSE
LSTLLSSLSRYFRRGGPSSPASGVLPSPQGKSASKLGPEGQEPLFQLVQAFVRHVQR
NT seq
5214 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgggcgggctgtgcgcgaggagcagcagagaattgtggacaattcttctgggc
agatcagctttaagagaaccagcacagattgcagcagagttgaacaagcactggcagaga
ttgttagagggactttcatactataaaccgccaagtacgacttccgcagaaaaaataaaa
gcggataaagatgtagctgctccactaaaagagttgggtctgagggtcagcaagtttttg
ggtctggatgaagagcagagcgtgcagttgttacagtgttatctccaagaggattacaga
ggaacaagggactccctcaagacagttcttcaggatgaaaggcagagtcaggctctgatg
ctgaagcttgctgactattactatgaagagaggatctgcattctgcgctgcgtcctccat
ctgctcacctattttcaggatgagaggcacccttacacagcacaatacttccaatgtgtt
gaaaagttggacaaggaactagttcctaattatcggaaacagtttgaagcgctgtacaaa
gcagaagctcctacatgggaaacacatgggaatctcatgacagaacgtcaggtttcccgt
tggtttgtgcaatgcctccgtgaacagtccatgctcctggaagtcatcttcctctactat
gcatactttgaaatggcacctgatgagcttctggcatttgcaaagatgttcaaagagcag
ggatttggcactagacaaaccaacagacatttggtagatgagagcatggatcacttggtg
gatcgtattggctactttagtgctcttattctggtggaaggcatggaaatcgactccctc
catgagcgtgctttggatgacaggacagaggagcacaagttagccaataatgagcgcatc
caccaggagatggacaatcagctgctgcagttaggggatgtctcacatcatgctccagtg
cttttggcctgggctcttctccgtcacactgtaaacccagaggagtcagcaaatattatc
aggagaatgggcagcaccgctatccagctgaatgttttccagtatctgacaaagcttctg
cgatcgctgagcagtggggggaagaattgtactgccagcacagcttgtatgtgtatttat
gggcttctttcctttgtcctgacatcactggaactacatacattgggcaatcagcaggat
ataattgatgctgcgtgtgaagttctggcagcttccagcattcctcagctcttctggaag
acggaacctactgcaggtctgggtattatcctggatagtgtgtgtgggatgttcccccat
cttcttactcctctccttcagctgctccaagcccttgtgtctgataaatctactgcaaaa
aaggtgtacagtttcctggataaaatgtcattctatatcgaattgtacaagcataaacct
cctgatgttatctctcatgaagatggcacgctttggcgaagacaggctccaaagctcctc
tatcctcttggattaggtcaaacaaatctgcggatacctcagggaacagtgggccaagtg
atgctggatgatcgggcgtatttggtacgatgggagtattcctacagcagctggacactg
tttacctgtgagattgagatgctgctccatgttgtatcgacagcagatgtgattcagcat
tgccagagggtcaagccaataattgatctggttcataaagtcatcagcactgatgtatcg
atagcagattgccttctgccaatcacgtcacgaatctacatgctcctgcagaggctgaca
actgtaatctctccccctgtggatgttattgcttcttgtgtcaattgtttgacagtactg
gctgctcggatgccagccaaggtttggactgaccttcaccatacagggttcttgccattt
gttgccaatccagtgtctagtatgaatcacatgattagtgcagagggaatgaatgctggg
ggctatggaaacctattgatgagcatagaacagccccaaggcgagtacagcgttaccgtc
tccttcctgaacctcatcacaacacttgtccggggacaacttggtagcacccagagccaa
ggacttgtgccttgcattgtgtttgtcctgaaggagatgttaccaaattaccacaaatgg
cgttacaactctcatggagtgagagagaaaattggatgccttattctgcagttgatccat
gctatactgaatttatgccctgaaatggatcctcgcagcagcaatgcccccagccttcag
tccttgtgcatcttcagcctggccaacactgaagcagggcaagctgtcattaacatcatg
ggaattggtgtggacactattgatatggtaatggcctcccagtctagtagtgacgagtca
caaggccaaggtcaactgctaatccaaacagttaagctggcattctcggttaccaataat
gtcatccggttgaaacctccttctagcgtggtatctccattagaacaggcacttactcag
catggtgctcatggaaacaatcttattgcggtcttggcgaaatacatctaccacaagcat
gaccctgcacttccacgcctggccatccaattgctcaaacgactggctacggttgctccc
atgtctgtttacgcctgccttggtagtgatgctgctgccatccgtgatgccttcctcacc
cgcctgcagagcaagattgaggacatgcgtattaaggtcatgatactggagttcctcaca
gtcgcggtggagacacaacctgggctcatcgagctgttcctgaacttggaagtgaaggat
ggtagtgatggatcaaaggaattcagcttaggggagtggagttgcctccaagtagtctta
gagctgatagactccaaacaacaggagaggtactggtgccctcccctcttgcatcgtgct
gccattgccttcctgcatgctctgtggcaggaccgtcgagatagcgccatgctagttttg
aggacaaagccaaagttttgggaaaatttaaccaatcccctctttgggacccttcctccg
ccttcagaatcatcagagctgagtgtcttggatacctgtgccttaataatgaaaataatc
tgtttggagatctactatgttgtcaagggctcactggatcagtccctgaaagacacgctg
aagaatttctccaccaaaaagcgctttgcttattggtcagaatatgtgaagttactggca
tatcacgtggcagagacagagggcagcagctgtgcctccgtgacagagtatcaaatgctg
atctcagcctggcggatgctgctgataatctctactagccatgcggatataatgcatctg
actgattctgcagttcgtcagcaattatttctggatgtactagatgggaccaaggttttg
cttctagttcccatgtcagtatgctgtctgcagctggggtctatgctatgtacccttctt
ctgatcctgctcaaacagtggaagagcgagttgggttctgtggataaaatcataaactcc
ttgacgcagattctggagggagtgctacaggcagatcagcagatgatggagaaaaccaaa
gccaaagtgttctcagctcttatcactgtgctgcaaatgaaggagatgaaagtgaatgag
atcccacaatactcccagctggtgttgagcgtgtgtgaaacactccaagatgaggtcatt
gcactctttgatcaaactcgacacagcctgaccttgggagatgctgcagatgacaaggac
agcatggaaacagatgatgcctctcgagttaaacacaaggaccagcgagatggggtgtgt
gttctgggtttgcatctggctaaagagctctgtgaagttgatgaagatggagattactgg
ctacaaattactaggaaagtccctgtgcttcctactatcttcgccgcgttagagatcagc
ctcagagttaaacaaaaccttcacttcacagaggcctcattacatttactgctgacctta
gcaaggactcaacagggagcagcagcagtggctggagctggtgtcacacagagtgtctgc
ctgcccctcttgagcgtgtaccagctcagcagtaacggagctgttcagacatctgcttca
tctcgaaagtcgttggatgccccatcttggcctggggtctatcgtctctcaatgtcactg
atggagcgccttcttaaaacacttagatacaacttcctgacagaagctctggattttgtt
ggtgtccatcaagagaggattctgcagtgcctgaatgcagtacggacagtacagagcttg
ccctgtctggaggaggccgatcacactgttggtttcattcttcagctctcaaatttcaca
aaggagtggcatttccacctgccacagctcatgagagatatgcaggtgaatctgtgttac
ctgtgtcaggcctgtacctccctcctgcacagccgcaaaatgctccagcactacctgcag
acaaaaaatggtgattcccttccatcaagtgtgactccccgagtgcagcgtaatccccaa
gcctcctccaaacatcccagccctgagtcagaggcagcggaagagaaagcgctgcttaca
gtccagtacagcctcttgaaaatcctcagcaaaactcttgctgccctgcgccatttcacc
cctgatgtctgtcagatcctccttgatcagtcgctggaccttgccgagtacaacgtgctc
ttcattttgagttttgccacaccagcctttgattcggatgtcgcaccttgctttgggacc
ctcctcgccacagtgaacgtggcccttaacacgctgggagagctggataagaagaaggaa
cctttccctcaggctgcagggctgaatatgcaagagggaaccaaaaccctcaagtctctg
ctcatgtttacaatggaaaactgtttctacctgctcatctcccaggctgttcggttcttg
agagacccagctgtgcacccccgtgataagcagcggatgaaacaggagctcagctctgag
ctgagtacgctgctctccagcctgtctcgttacttccgccgcggtggtccctcttcacct
gccagcggggttcttccctctccccaaggaaagtcggcctccaagctgggtcctgagggg
caggagcctttgtttcagctcgtgcaggcctttgtccggcacgtgcagagatag
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integrated database retrieval system
