Leptospira milleri: AB3N58_00100
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Entry
AB3N58_00100 CDS
T10745
Name
(GenBank) ribonuclease R family protein
KO
K12573
ribonuclease R [EC:
3.1.13.1
]
Organism
lmil Leptospira milleri
Pathway
lmil03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lmil00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
AB3N58_00100
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lmil03019
]
AB3N58_00100
03016 Transfer RNA biogenesis [BR:
lmil03016
]
AB3N58_00100
Enzymes [BR:
lmil01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
AB3N58_00100
Messenger RNA biogenesis [BR:
lmil03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
AB3N58_00100
Transfer RNA biogenesis [BR:
lmil03016
]
Prokaryotic type
tRNA degradation factors
AB3N58_00100
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNB
OB_RNB
CSD2
Motif
Other DBs
NCBI-ProteinID:
XDD42803
LinkDB
All DBs
Position
1:complement(19718..21910)
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AA seq
730 aa
AA seq
DB search
MDTYKIQRKIIEYLDQKAGKDITRQEIKKKFTESSEFKRPDPKSKKVKAFKRKEKVPRKE
IEFLIDQLCNLLEEEGLLIPNKKYFTVANPFRLTGRISISRRGDGFISLPSKNEIFVPGP
MTNTAITGDKVEVIPLGIGKKDRLEAEVTKVLKRGRILYRMRVREKTNKFVFGNFLDMLG
EGKEGVLHVKSILKDSFDAININDVLIVKLKEGSEPQDNLYDVSFIRFESDTKEDSDLQR
ILMKYNYDPVHPDFIPLDFPEEVSEKTVSDWNQRTDLRDLYAVTIDGITAKDFDDAISFV
DEGNRLRVWIHIADVSYYVEKGSALDKEAYERATSVYLANRVVPMLPPILSEDLCSLVAN
TNRLAFTVEMEASKTGEIYNAKFYKSIIKVKKRYTYEMAEEEIKAQDPNNWMYQVSLFTD
ALRKQRMKTGRIDLNLRETTITWNERKEPIGIENRERLTSHILIEELMLSANLKVDEFLR
KKKIPTLHRIHEPMDEEKLETLNHFLQLNGYNVQIHDTSYPEIMKAVKEIQDNSVGKIFN
YLLLRSFMQAYYGADPLGHWGLGFKDYCHFTSPIRRYPDLIVHRVLHATLLESEKVYSDS
EIAVMGLHCSEEERRAADAERDIVKIKSFRYLESTGIKEFKSFIVGIRPSQIFVELDLSN
LEGVLDKSEFTDEFEVIIKNDFSFYSKKYSKIFFIGDPVTVSLDRIDFEEIKVFLKLKDF
KKEDTTLKKK
NT seq
2193 nt
NT seq
+upstream
nt +downstream
nt
atggatacctataaaatacaaagaaaaattatcgaatatctagaccagaaagctggtaaa
gatatcacaagacaagagatcaaaaaaaaattcactgaatcaagtgaattcaaacgaccc
gacccaaaatcaaaaaaagtaaaagcattcaaacgaaaagaaaaggtcccgagaaaagaa
atcgaatttctcatcgatcaactttgcaatcttctcgaggaagaagggttactaatacca
aacaaaaagtatttcacggttgcgaatccttttcgactcactggccgaatttcgatttct
cgtagaggtgatggattcatttccttaccttccaagaatgaaatttttgttcccggacca
atgacaaatactgcaatcacaggtgacaaagtagaagttatcccccttggtattggcaaa
aaagacagactcgaagcagaagtcactaaagttcttaaacgaggtagaatactttaccgt
atgcgtgttcgagaaaaaacaaataagtttgttttcggtaattttctcgatatgttaggc
gaaggtaaagaaggtgttctccatgtaaaatccattctgaaagatagttttgacgcaatc
aatatcaacgatgttttaattgtaaaattgaaagaaggctctgagccacaagacaatctt
tatgatgtcagctttattcggtttgaatctgatacaaaggaagactcagacttgcagcgt
atcctaatgaaatacaattatgatcctgttcatcctgactttattcctttagattttcca
gaggaggtttccgagaaaactgtttccgattggaaccaaagaactgacttacgagatcta
tatgcagttaccatcgatggaatcacagcaaaggactttgatgatgccattagttttgtc
gatgaaggcaatcgtttacgcgtatggattcatattgccgatgtttcctattatgtagag
aaaggatctgctttagacaaagaagcatacgaacgagcgacctccgtctacttagcaaat
cgagtggttccaatgttaccaccgattttatcagaagatctgtgtagtcttgtggcgaat
accaatcgtctagcttttacggttgaaatggaagcgagcaaaactggtgaaatttataac
gctaagttttataagtccatcatcaaggtaaaaaaacgttatacctatgaaatggcggaa
gaggagatcaaagcccaagatccaaacaattggatgtaccaggtttcattattcacagat
gctctccgcaaacaaaggatgaaaacaggaaggatcgacttaaatctccgtgagactaca
atcacatggaatgaaagaaaagagcctataggtatcgagaatcgagaacgacttacgagt
cacattctcattgaagaacttatgttatccgctaacttaaaggtggatgaattcttacgt
aagaaaaagattccgacacttcaccgaatccacgaacctatggatgaggaaaaattagaa
actctgaatcatttcttacaactcaatggatacaacgttcaaattcatgatacaagttat
cctgaaatcatgaaagccgtgaaagaaattcaggataattccgttggaaagattttcaat
tatcttttacttagaagttttatgcaggcctattatggagcagacccactaggccactgg
ggacttggttttaaagactattgtcattttacgtcaccgatcagacgatatcccgattta
attgttcatcgtgtgctacatgcgactctactggaatcagaaaaagtatattctgatagt
gaaatcgcagtaatgggacttcattgttctgaggaagaacgacgcgctgccgatgcagaa
cgagacatcgtaaaaattaaatcttttcgttatttggaatcaactggaatcaaagaattt
aaaagtttcatagttggcattcgaccatctcaaatatttgtggaattagatctttctaat
ttggaaggtgttctcgataaatcagagttcactgatgagtttgaagtcattatcaaaaat
gacttttccttctattccaagaaatactctaagattttctttattggagatccagtcact
gttagtttggatagaatcgattttgaagaaataaaggtttttttgaaattaaaggatttc
aaaaaagaagatacaacactcaagaaaaaataa
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