Leptospira milleri: AB3N58_07170
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Entry
AB3N58_07170 CDS
T10745
Symbol
rpoD
Name
(GenBank) RNA polymerase sigma factor RpoD
KO
K03086
RNA polymerase primary sigma factor
Organism
lmil Leptospira milleri
Pathway
lmil02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
lmil00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
AB3N58_07170 (rpoD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lmil03021
]
AB3N58_07170 (rpoD)
Transcription machinery [BR:
lmil03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
AB3N58_07170 (rpoD)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r2
Sigma70_r4
Sigma70_r1_1
Sigma70_r1_2
Sigma70_r4_2
DUF948
TMPIT
Dict-STAT-coil
Motif
Other DBs
NCBI-ProteinID:
XDD44111
LinkDB
All DBs
Position
1:1560506..1562278
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AA seq
590 aa
AA seq
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MENLASLPEVQKIISIGKANREVSYDEINEILPDKILNSEKIDDVFTLLHEMGIEIVEEY
SKKSLEESSSLTTTKEETTKETKEKPARKKRESSVSSSSEDPIRLYLKEIGKVSLISGET
EVFLAKRIEKGEKIIEETILSSSILRQNFAKLIPKIKSKKIKVYDLVKVDKMYALNQEQA
DKLEKVFFENMELIQQDEKVLNESTNRIRKYSENSKKFKELKEKIDMSTGKIDEAIRKIG
VSQKEIQKISQKIKSMVFRVKEIEKHFLKIKAKYGHDVREIKALNRFIEKNENLDEIEKM
MGCDIDEVREVIKDIRNNERKLRRMEQEAGSPVGEIKDWGEKIIKGEREIAQAKRELVRA
NLRLVVSIAKRYANRGMHFFDLIQEGNIGLIRAVDKFEYKKGYKFSTYATWWIRQAITRA
ISDQARTIRVPVHMIEQVNKVIRETRLFVQEFGRDPSNDEIAERLGWPVQKVKAVKNVAR
EPISLEIPVGSEEDSELGDFIEDKEVISPLNSAASSILSEQIRQVLQTLPAREQKVIRMR
FGLDDGYAQTLEEVGYQFKVTRERIRQIEAKALRRLRHPSRSKKLKDYID
NT seq
1773 nt
NT seq
+upstream
nt +downstream
nt
atggaaaatctagcaagcctaccagaagtacaaaagattatctccatcggaaaggcaaac
cgagaggtatcgtatgatgagatcaatgaaatactaccggataaaattctaaactccgaa
aagattgatgatgtcttcaccttgttacacgagatggggatcgaaattgtagaagagtat
tccaaaaaatctttggaagagtctagttcccttactacgaccaaagaagaaactaccaaa
gaaacgaaagaaaaaccggcacgtaaaaaaagggagtccagtgtttcttcgagttctgag
gatccgattcggctttatctcaaagaaattggaaaggtttctctcatctcgggagaaaca
gaagtgttccttgccaagcggattgagaagggtgaaaaaatcattgaagaaaccatttta
agttcttcaatcctccgccaaaactttgctaaactcattccgaagattaagtccaaaaaa
atcaaagtgtatgatttggtaaaagtggacaaaatgtacgcgctgaaccaagagcaggcg
gacaagttagaaaaagtattttttgaaaacatggaactcatccaacaggatgaaaaagtt
ctgaacgaatccacaaaccgtattcgtaagtattctgaaaattctaagaaattcaaagaa
ctcaaagaaaaaatcgatatgtctacgggcaaaatcgatgaagccattcgtaaaattgga
gtttcccaaaaagaaatccaaaaaatctctcaaaagatcaaatcgatggtcttccgtgtg
aaggaaattgaaaaacatttcttaaaaatcaaagccaagtatggtcacgatgttcgtgaa
atcaaagctctcaaccgcttcatcgaaaaaaatgagaacttagatgaaatcgaaaaaatg
atgggttgtgacattgatgaagtgagagaagtcatcaaagacattcgtaacaacgaacga
aaactccgtcgtatggaacaggaagctggttctcctgttggggaaatcaaagactggggt
gaaaaaatcatcaaaggggaacgggaaattgcacaagcaaaacgcgaacttgtgcgagcg
aaccttcgtttggtggtctctatcgcaaaacgatatgccaaccggggaatgcattttttt
gacctcatccaagaaggaaacattggtctcattcgtgcagtcgataagtttgaatacaaa
aagggatataagttttctacgtatgccacttggtggattaggcaagccatcactcgtgcg
atctctgaccaagctcgtacgatccgtgttcctgttcacatgattgagcaggtcaacaaa
gtgatccgtgaaactcgtctttttgtgcaagagtttggtcgtgatccttccaatgatgaa
attgcagaacgtcttggatggcctgtacaaaaagttaaggcagtgaaaaacgtagctagg
gaaccaatctcccttgagatccctgtgggttcggaagaagattcagaactcggagatttt
atcgaagacaaagaagtgatctcgcctttgaattcagctgcgtcttccatcctttcggaa
caaattagacaagtcttacaaacacttcctgctcgggaacaaaaagtgattcgtatgcgg
tttggtttggatgatggttatgcacaaacacttgaagaggttggttaccaatttaaggta
acgcgggaacggattcgtcagattgaagcgaaagcgttacgaagactccgccacccaagt
cgctcgaaaaaactgaaagactatatcgattaa
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