Leptospira milleri: AB3N58_09175
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Entry
AB3N58_09175 CDS
T10745
Symbol
rpoC
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
lmil Leptospira milleri
Pathway
lmil03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
lmil00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
AB3N58_09175 (rpoC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lmil03021
]
AB3N58_09175 (rpoC)
03400 DNA repair and recombination proteins [BR:
lmil03400
]
AB3N58_09175 (rpoC)
Enzymes [BR:
lmil01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
AB3N58_09175 (rpoC)
Transcription machinery [BR:
lmil03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
AB3N58_09175 (rpoC)
DNA repair and recombination proteins [BR:
lmil03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
AB3N58_09175 (rpoC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
DUF7957
Motif
Other DBs
NCBI-ProteinID:
XDD41487
LinkDB
All DBs
Position
1:complement(1963660..1967961)
Genome browser
AA seq
1433 aa
AA seq
DB search
MRNYNSFESITIRLASPERIKEWSFGEVKKPETINYRTLKPERDGLFCEKIFGTTKDWEC
YCGKFKSIRYKGVVCDKCGVEVTHSKVRRERMGHIELAAPVSHIWYYRSVPSRMGLLLDM
TINQLKSVLYFEKYVIIDPADSGRNRGELIDEDEYHNYLDEYGDKFIAGIGGDAIKELLA
RIDVDAEARVIRQKIQDKNKISDKRIFKRLEVLEAFRDSGNRPEWMVLDVVPVIPPELRP
MVQLEGGRFATSDLNDLYRRVINRNNRLKRLLALKAPEIIVRNEKRMLQEAVDALFDNSR
RKRTVKGKGNRPLKSISDMLKGKQGRFRQNLLGKRVDYSGRSVIVVGPELKYHQMGLPKK
MALELFKPFIMKRLVDLELAPNIKSAKKKIEAEDKEVFDVLETVVKEHPVLLNRAPTLHR
LGIQAFLPVLVEGKAIKLHPLVCHAFNADFDGDQMAIHVPLAPKAQLETWMLMLSPHNIL
NPANGQPICGPTQDIVLGIYYLTSEVKDGKGEGKFFTGLEEVMYAIETKTVEIRSKISVL
HEGKIIETTPGRLIFNQVMPKGYVYINRTLGDKETNKIIADVYEKFGPGITVVMLDEIKR
LGYRYATVFAPTISIDDIRVSPQKEGLVNDANKEVEKADMEYRKGIITNEERRKKVIEIW
TKTNDRITEGMFKELEKDQAGFNPVYVMAASGARGSKQQIRQLAGMRGLMAKPSGEIIEL
AIRSNFREGLGVLEFFISTHGARKGLADTALKTADAGYLTRRLVDISQDVIVSEDDCGTK
ANITLGIVKEGENVIVSLADRVFGRYTAEDLVDPVTEKVVFPKDTLITRALGQQIENLGY
DKIKVRSPLTCRSRHGICTKCYGMDMARLVPAEIGEAVGTIAAQSIGQPGTQLTMRTFHV
GGAASATIQEKEHKVPFRSLVKSINGRLVTNANGAKVFARRGTIIVNRLIQEFNTESLSS
VRVVDGQRLEKGEVFATQVGESTEQRITSDQAGVVSLVGTTLRILGDDIVIPVKIGTILK
AEEGIIVEENKALAEFDPYNEVAVSEAAGTIQWEDLEIGKNVRRDVDPKTSNIILKVVEQ
KKDRLVPKVIIGSDSYSVPVDALLQFQNGDKVREGDVIFKIPSVAEKTRDITGGLPRVDE
LFEARRPKDACTLAEIDGKIEDKGEIVKEKRILYILPDSPELEKVKVAIPIGKQIRVRHG
DFVKRGDQLDEGNFDPHDILAIKGPSALHEYLVSEVQEVYRLQGVHINDKHIEVVVRSML
RKVIITDSGDTSFVNQQQVDKFLFDEENDRVEQEGGSPAQGTPVLLGLTKASLNTESYFS
AASFQETTKVLTDAAIKGKTDNLMGLKENVIIGHMIPAGTGMKKYRDIEVFKEMPGDLDW
DLESEEEEEELSELSESAPVSTATLSKLVAEEDEDEDELEEESDDSDDEDDDD
NT seq
4302 nt
NT seq
+upstream
nt +downstream
nt
atgagaaattacaatagttttgaatcgattacgatccgtttggcatcacccgagcggatc
aaagagtggtcgtttggggaagtgaaaaaacctgaaacgatcaactaccgtaccctaaag
ccggaacgagatggtcttttctgcgaaaaaatctttggaaccacaaaggattgggaatgt
tactgcggtaaattcaaatccatccgttataaaggtgtggtttgcgacaaatgtggggtt
gaggtcactcactccaaagttcgtcgtgaaagaatggggcacattgaacttgcggctcct
gtttcgcatatttggtactaccgatcggttccatctcgtatgggactccttctcgacatg
acgatcaaccaactcaaaagtgttctttactttgagaagtatgtgatcattgaccctgct
gattccggaaggaacaggggcgagctcatcgatgaagatgaataccacaattatttagat
gaatacggtgataagtttatcgcagggattggtggggacgccatcaaagaacttctcgca
cgcattgatgtggacgcagaagctcgtgtgatccgccaaaagatccaagacaaaaacaaa
atctccgacaaacgtatttttaaacgcctcgaagttctggaagcattccgtgattctgga
aaccgtcctgaatggatggttctggatgtagttccggtcatcccaccagaacttcgtccg
atggtacaacttgaggggggacgttttgcaacttccgacctcaatgatttgtatcgccgt
gtgatcaatagaaacaatcgtctcaaacgacttttggcactcaaagctcctgagatcatc
gttcggaacgaaaaacgtatgttacaagaagcagtcgatgctctttttgataacagccgt
cgcaaacgaactgtgaaaggaaaaggaaatcgtccgcttaaatcgatctccgatatgctc
aaaggaaaacaaggtcgtttccgccaaaacctactcggaaaacgggtagattattctggt
cgttcggtaatcgtagtaggtcctgaactcaaataccaccaaatgggtcttcctaaaaaa
atggctttggaacttttcaaaccattcatcatgaagcgccttgtggatttggaactggca
ccaaacatcaaatctgcgaagaaaaaaatcgaagcagaagacaaagaagtttttgatgta
ttggaaacagtggtgaaagaacacccagtactcctcaaccgtgctccaacacttcacaga
cttggaatccaagcctttttaccagtccttgtagaaggaaaagcaatcaaactccaccca
ctcgtatgtcatgcgtttaacgccgacttcgatggggaccaaatggccatccacgtacct
cttgctccaaaagcacagcttgagacttggatgctcatgttatcaccgcataacatttta
aacccagcgaatggacaaccgatttgtggaccaacacaagacatcgttcttgggatttat
tacctcacttctgaagtcaaagacggaaaaggggaaggaaaattcttcactggtctcgaa
gaggtgatgtatgcgattgaaaccaaaacggttgaaattcgctctaaaatctccgttctt
cacgaaggtaaaatcatcgaaaccacaccaggaagacttatcttcaaccaggtgatgcca
aaagggtatgtttatatcaacagaaccctcggtgataaagaaacaaacaaaatcattgca
gacgtatacgagaagtttggccccgggatcacagttgtgatgctggatgaaatcaaacga
cttggttaccgctacgcgactgtatttgctcctacaatttccattgatgacatccgagtt
tctcctcaaaaagaaggtctcgtgaatgatgccaataaagaagtcgaaaaagcggatatg
gagtaccgtaaaggtattatcacaaacgaagaacgtcgtaagaaagtaatcgaaatttgg
accaaaaccaatgaccgcattaccgaagggatgttcaaggaacttgaaaaagaccaagcg
ggatttaacccagtttacgtcatggcagcttccggtgctcgtggatctaaacaacagatc
cgtcagctcgctgggatgcggggtcttatggcgaaaccgtccggagaaatcatcgaactt
gcgattcgttcgaacttccgtgaaggtcttggagtattagaattttttatctccacacat
ggtgcaagaaagggtcttgcggatactgccttaaaaacagcggatgcgggttacctcact
cgtcgtcttgtggatatttcccaagacgtgatcgtttctgaagatgattgcggaaccaag
gcaaacatcactctcggaatcgtaaaagaaggggaaaacgtaattgtttctcttgcggac
agagtgttcggtcgttacacagcggaagacctagtcgaccctgtgactgaaaaagtggta
ttcccaaaagatactctcatcacaagagcactcggccaacagatcgaaaaccttggttac
gataaaatcaaagtaagatctccgctcacttgccgttcccgtcacggaatttgtacaaaa
tgttacggtatggacatggctcgccttgtgccagctgagattggagaagcagtgggaacc
attgcggctcagtccattgggcaaccaggaacacagttaaccatgagaaccttccacgtg
ggtggtgcggcctccgcaacgatccaagagaaggaacacaaagttccattccgttctttg
gtaaaatcgattaatggacgtttggtgacgaatgccaacggagcaaaagtatttgctcgt
cgcggaacgatcatcgtgaaccgcctcatccaagaattcaacacggaatctttatccagt
gtgcgagtggtagacggacagcgccttgaaaaaggggaagtgtttgctacgcaagtgggc
gaatccacagagcaacgcatcacgtctgaccaagcgggtgttgtttcacttgtcggaaca
actctccgaattttgggtgatgacattgtcattccagtgaaaatcggaacgatcttaaaa
gcagaagaaggcatcattgtagaagaaaacaaagcactcgctgagtttgacccgtataac
gaagtagccgtatcggaagcagcaggaacgatccagtgggaagacctggagattggaaaa
aacgttcgtcgtgatgtggacccaaaaacttccaatatcattttaaaagttgtggaacag
aagaaagaccgtcttgttcctaaagtcatcattggttctgatagttattccgttccagtg
gatgctcttctccaattccaaaatggagacaaggtgcgagaaggggatgtgattttcaaa
atcccatcagtcgcagaaaaaactcgcgatatcacgggtggtctcccacgggtcgacgaa
ctttttgaagcacgtcgtccgaaagatgcctgcacgctcgctgaaattgacggaaaaatc
gaagacaaaggcgaaatcgtaaaagaaaaacgaattctttatatcctacctgattcacca
gaattggaaaaagtaaaagtggcgatcccaatcggaaaacaaatccgcgttcgtcatgga
gactttgtgaaacgtggtgaccagttggatgaaggaaacttcgatccgcacgatatcctc
gcgatcaaagggccaagtgcccttcacgaataccttgtatcggaagtgcaagaggtctac
cgattgcaaggggttcatatcaatgataaacacatcgaggttgtggttcgctccatgctt
cgaaaggtgatcatcactgacagtggggatacatcgtttgtaaaccaacaacaagtggat
aaattcctttttgatgaagaaaatgatcgagtggaacaagaaggtggatcgcctgcacaa
ggaactccagtgcttcttggactaacgaaagcctcactcaatactgagtcttatttctca
gcagcgtcctttcaggaaacaaccaaggttctaaccgatgcagccatcaaaggaaaaaca
gacaacctgatgggtctgaaagaaaacgtcatcattggtcacatgatccctgcaggaact
ggtatgaaaaaataccgtgacattgaagttttcaaggaaatgcctggggatttggattgg
gacttggaatcagaagaggaggaagaagaactttccgaactttcagaatcagctcctgtt
tcaactgccacactctcaaaacttgtggcggaagaagacgaagatgaggacgaattggaa
gaagaatcagacgactcagatgatgaggacgatgacgattag
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