Lautropia mirabilis: NCTC12852_00439
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Entry
NCTC12852_00439 CDS
T05799
Symbol
recQ
Name
(GenBank) ATP-dependent DNA helicase recQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
lmir
Lautropia mirabilis
Pathway
lmir03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lmir00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
NCTC12852_00439 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lmir03019
]
NCTC12852_00439 (recQ)
03400 DNA repair and recombination proteins [BR:
lmir03400
]
NCTC12852_00439 (recQ)
Enzymes [BR:
lmir01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
NCTC12852_00439 (recQ)
Messenger RNA biogenesis [BR:
lmir03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
NCTC12852_00439 (recQ)
DNA repair and recombination proteins [BR:
lmir03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
NCTC12852_00439 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
HRDC
DEAD
Helicase_C
RecQ_Zn_bind
Cas3-like_C_2
HHH
ResIII
Rhodanese
Motif
Other DBs
NCBI-ProteinID:
VEG99833
LinkDB
All DBs
Position
1:complement(555322..557145)
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AA seq
607 aa
AA seq
DB search
MHAEDILHQVFGYPAFRGLQHDIIEHVAGGGNALVLMPTGGGKSLCYQIPALMREGVGIV
VSPLIALMQDQVAALRELGVAAAYLNSSLSAAEAADIERQLRQGELKLLYVAPERLLTER
CLALLHRCQLALIAIDEAHCVSQWGHDFRPEYIGLGRLADEFPAVPRIALTATADDLTRR
EIVNRLALQDAEPFVTSFDRPNIRYRIIEKRDGNQQLLRFIRDGHEGESGIVYCASRNRT
EQVAAFLQEEGFHARAYHAGLEAAERSDVQAAFQREDGMIVVATIAFGMGIDKPDVRFVA
HVDLPRSIEAYYQETGRAGRDGLPAEVWMAYGLHDVVQQRRFIKASEASEEFKRLQGSKL
DAMLALCEATDCRRVRLLAYFGEHAAPCGNCDNCLSPPKTIDGTVLAQKFLSCVYRCTRA
SGHPFGAQYLIDVLRGQANEKVTANGHDSLPVFGVGSDLSLTQWRSVVRQLSIAGYIHID
AERFQTISLTEAARPVLKGEETVRLREPVEREPRSRSRKRTSSTTSTLERDLDAAGRACF
DRLRSWRSQQARDSGVPAYVIFHDATLHEIAQRRPATLHALAAVPGVGEKKLETYGEAVL
EVVADEG
NT seq
1824 nt
NT seq
+upstream
nt +downstream
nt
atgcacgccgaagacatcctgcaccaggtgttcggctacccggcgttccgggggctgcaa
cacgacatcatcgaacatgtggccggtggcggcaatgcgctggtgctgatgcccaccggg
ggtggcaagtcgctgtgctaccagatcccggcactgatgcgcgagggcgtgggcattgtc
gtctcgccgctgatcgcgctgatgcaggaccaggtggcagcgctgcgcgagctgggggtg
gcagcggcctacctcaattcatcgttgtcggcggccgaggcagccgacatcgagcgtcag
ctgcgccagggggaactgaagctgctgtacgtggccccggagcgtctgctgaccgagcga
tgtctggcgctgctgcatcgctgtcagctggccctgattgccattgacgaggcgcactgc
gtctcgcagtggggacacgactttcggcccgagtacatcggtctgggcaggctggccgat
gagttcccggcggtgccgcgcattgcgctcaccgccaccgccgacgatctcacccgccgc
gagatcgtcaaccggctggccctgcaggatgccgagccctttgtcaccagcttcgaccgc
cccaacatccgctaccggatcatcgagaagcgcgacggcaaccagcagctgctgcgcttc
atccgtgatggccacgagggggaatcgggcatcgtctactgcgcgtcgcgcaaccgcacc
gagcaggtggcggccttcctgcaggaggagggctttcatgcccgtgcctaccatgccggc
ctggaggctgccgaacgcagcgacgtgcaggctgccttccagcgcgaggacggcatgatc
gttgtggccaccatcgccttcggcatgggcatcgacaagccggatgtgcgcttcgtggcg
cacgtggacctgccgcggtccatcgaggcctattaccaggaaaccgggcgagccggccgc
gatggcctgcctgctgaagtctggatggcctatggcctgcacgacgtggtgcagcagcgg
cgcttcatcaaggcgtctgaagccagcgaggaattcaagcggctgcagggcagcaagctg
gatgccatgctggcgctgtgcgaagccaccgactgccgccgcgtgcgtctgctggcctat
ttcggtgagcacgccgcgccctgcggcaactgcgacaactgcctgtcgcccccgaagacc
atcgacggcaccgtgctggcgcagaagttcctgtcctgcgtctaccgctgcacccgggcc
agcggtcaccccttcggtgcgcagtacctgatcgacgtgctgcgcggccaggccaacgag
aaggtcacggccaacggccatgacagcctgcctgtctttggtgtgggcagcgatctgagc
ctgacacagtggcgatcggtggttcgccagctttccattgccggctatatccacatcgat
gcggaacgcttccagaccatctcgctgacggaggccgcccgtccggtgctgaagggcgaa
gagaccgtgcgcctgcgtgagcccgtcgagcgcgagccgcgcagccgttcacgcaagcgc
acgagcagcaccacgtccacgctggagcgtgacctggacgcggccgggcgcgcctgcttt
gaccgtctgcgcagctggcgcagccagcaggcccgcgacagcggtgtgccggcctatgtc
atcttccacgatgccacgctgcacgagatcgcccagcgccggcccgccaccctgcacgcg
ctggctgctgtaccgggcgtgggcgagaagaagctggagacctatggcgaggcggtgctg
gaggtggtggcagacgaggggtga
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