KEGG   Lautropia mirabilis: NCTC12852_00551
Entry
NCTC12852_00551   CDS       T05799                                 
Symbol
vapC1
Name
(GenBank) Ribonuclease VapC1
  KO
K18828  tRNA(fMet)-specific endonuclease VapC [EC:3.1.-.-]
Organism
lmir  Lautropia mirabilis
Brite
KEGG Orthology (KO) [BR:lmir00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:lmir03016]
    NCTC12852_00551 (vapC1)
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:lmir02048]
    NCTC12852_00551 (vapC1)
Transfer RNA biogenesis [BR:lmir03016]
 Prokaryotic type
  tRNA degradation factors
   NCTC12852_00551 (vapC1)
Prokaryotic defense system [BR:lmir02048]
 Toxin-antitoxin system (TA system)
  Type II TA system
   VapC-VapB
    NCTC12852_00551 (vapC1)
SSDB
Motif
Pfam: PIN
Other DBs
NCBI-ProteinID: VEH00053
LinkDB
Position
1:complement(696511..696918)
AA seq 135 aa
MIYMLDTNIIIYLMKNRPESVARKISSLAPHDRIVMSFVTYGELLQGAEGSRDRKKSHDN
IRRITQRIQILYPDENTCIHYGHWAETLKRQGRPIGNNDLWIACHALSAGATLVTHNSRE
FARIEDLNWQDWVEP
NT seq 408 nt   +upstreamnt  +downstreamnt
atgatctacatgctggataccaacatcatcatctatctgatgaagaaccggccagagagc
gtagccaggaaaatctcctctcttgctccccacgacaggatcgtgatgagtttcgtcacc
tatggagagctgctccaaggtgcagaaggcagtcgtgacaggaagaaatcccacgacaac
atacgcaggatcacccagcggatccagatcctgtatccagatgagaatacctgcatccac
tatggccattgggccgaaacactgaaaaggcaaggcagacccattggcaacaacgatctc
tggattgcctgtcatgccctgagcgccggcgcaacactggtcacccataacagccgggag
ttcgccaggatcgaagacctgaattggcaggattgggtcgagccatga

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