Lautropia mirabilis: NCTC12852_00649
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Entry
NCTC12852_00649 CDS
T05799
Symbol
rhlE_1
Name
(GenBank) ATP-dependent RNA helicase rhlE
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
lmir
Lautropia mirabilis
Pathway
lmir03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lmir00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
NCTC12852_00649 (rhlE_1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lmir03019
]
NCTC12852_00649 (rhlE_1)
Enzymes [BR:
lmir01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
NCTC12852_00649 (rhlE_1)
Messenger RNA biogenesis [BR:
lmir03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
NCTC12852_00649 (rhlE_1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_22
Motif
Other DBs
NCBI-ProteinID:
VEH00249
LinkDB
All DBs
Position
1:complement(809416..810861)
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AA seq
481 aa
AA seq
DB search
MNTDTSFSGLGLADPLLRALADVGYTNPTPIQAKAIPVVLTGRDLLAAAQTGTGKTAGFT
LPILQRLLDNPMQTRKPGRPRCLILTPTRELTAQVEESVKAYAKYTRIRSVLIFGGVSIN
PQIQALRQPVDILVATPGRLLDHVQQGTVDLSGVEIFVLDEADRMLDMGFIHDIRRVIAK
LPAKRQNLLFSATFSPEIRSLAHGLLDNPAEVDVAPRNTASELVAQSAHLVPKTRKRALL
SYLIGSRRWKQVLVFTKTKHGANRLAEQLGKDGIEAMAIHGNKSQGARTRALSRFKDGSL
PVLVATDIAARGLDIDELPHVVNYELPNVPEDYVHRIGRTGRAGHEGTAVSLVDREEMKL
LTGIERLIKRQIPRVEVEGFTGWQAQPGDSTDDINDRPPLPPGQRRGGNGRRGAPAAGRG
AAGSPREGRDGRSHGDLNGSPSQRTTTRAGEPGRAGNDRRRSRGGRGGRPGGGVGTTPSQ
D
NT seq
1446 nt
NT seq
+upstream
nt +downstream
nt
ttgaacactgacacatccttttccggccttggcctggccgacccactgctgcgggcgctg
gccgacgtgggctacaccaaccccacccccatccaggccaaggccattcccgtggtgctg
accggccgcgacctgctggccgccgcgcagaccggcacgggcaagaccgccggcttcacg
ctgcccatcctgcagcggctgctggacaaccccatgcagacccgcaagccgggccgcccc
cgctgcctgatcctcacccccacgcgtgaactcaccgcgcaggtggaagagtcggtcaag
gcttatgccaagtacacgcgcatccgctcggtgctgatcttcgggggcgtgagcatcaat
ccgcagattcaggcgctgcgccagccggtggacatcctggtggccacgccgggccgactg
ctggaccacgtgcagcagggcaccgtcgacctgtccggcgtggagatcttcgtgctggac
gaagccgaccgcatgctggacatgggcttcatccacgacatccgccgcgtcatcgccaag
ctgccggccaagcgccagaacctgctgttctcggccaccttctcgcccgagatccgctcg
ctggcacacggcctgctggacaacccggccgaggtggacgtggccccgcgcaacaccgcc
tccgaactggtggcgcaaagtgcccacctggtgcccaagacccgcaagcgggcgctgctg
tcgtacctgatcggctcgcgccgctggaaacaggtgctggtcttcaccaagaccaagcac
ggcgccaaccgcctggccgagcagctgggcaaggacggcatcgaggccatggccatccac
ggcaacaagagccagggagcccgcacgcgggcgctgtcgcgcttcaaggacggcagcctg
cccgtgctggtggccaccgacatcgcggcgcgcggtctggacatcgacgagctgccgcac
gtggtgaactacgagctgcccaacgtgccggaagactacgtgcaccgtattggccgtacc
ggccgggccggtcacgaaggcacggccgtgtcgctagtggaccgcgaggaaatgaagctg
ctcaccggcatcgagcgcctgatcaagcgtcagatcccgcgcgtggaagtggaaggcttc
acgggctggcaggcccagccgggtgattccaccgacgacatcaacgaccgtccgccgctg
cccccgggccagcgtcggggcggcaacggacggcggggtgcgcccgcagccggccgtggt
gcagcaggcagcccgcgcgaaggacgcgatggccgcagccatggcgacctgaacggctcg
cccagccagcgcaccacgacgcgcgccggtgagcccggacgcgccggcaacgatcgccgt
cgtagccgcggcggacgcggtggtcgtcctggcggtggcgtcggaacgacgccttcgcag
gactga
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