Lautropia mirabilis: NCTC12852_00655
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Entry
NCTC12852_00655 CDS
T05799
Symbol
mutM
Name
(GenBank) Formamidopyrimidine-DNA glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
lmir
Lautropia mirabilis
Pathway
lmir03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
lmir00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
NCTC12852_00655 (mutM)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lmir03400
]
NCTC12852_00655 (mutM)
Enzymes [BR:
lmir01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
NCTC12852_00655 (mutM)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
NCTC12852_00655 (mutM)
DNA repair and recombination proteins [BR:
lmir03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
NCTC12852_00655 (mutM)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
DUF1631
Motif
Other DBs
NCBI-ProteinID:
VEH00261
LinkDB
All DBs
Position
1:complement(820403..821230)
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AA seq
275 aa
AA seq
DB search
MPELPEVETTLRGITPHIQGKKVADVVLRQTRLRWQVNPQLAEILKGQEVLSCRRRAKYL
IIGFETGILLIHLGMSGSLRIFTCGDARIEHPDKHDHVDMVFADGTVLRYHDPRRFGAIS
WHEGIAEHHPLLEKLGPEPLSDDFSADYLYQKFKTQKRAVKLALMDNAVVVGVGNIYANE
SLFRSGILPHRPANKIKKKECAVLVETIKAVLQRAIETGGSTLRDFVNSDGKSGYFQQEY
TVYGRHNEPCVCCGGLVQKEVLGQRGTFYCPNCQK
NT seq
828 nt
NT seq
+upstream
nt +downstream
nt
atgccggaattgcctgaggtggaaacgactttgcgaggcatcaccccgcacatccagggc
aaaaaggtggcggatgtcgtgctgcgccaaaccaggttgcgctggcaggtcaatccgcag
ttggcggagatcctgaaggggcaggaggtattgagctgccgtcggcgggcaaaatatctg
attatcggttttgaaacgggcattctgctgattcatctgggcatgtcgggcagtctgcgt
atctttacgtgtggcgatgcacggattgaacatcccgacaaacacgaccatgtggacatg
gtgtttgcagacggcacggtgttgcgctaccacgatccacgcaggtttggcgcgatttcc
tggcatgaaggcattgcggaacatcatccgcttcttgagaagctcggccctgaaccgctt
tcagacgacttctccgccgactatctttatcaaaaattcaagacgcaaaagcgagcagtc
aaactggccctgatggacaatgccgtcgtggtcggcgtgggcaacatttatgcgaacgaa
agcctattcagatcgggcatcttgccacaccgccctgcaaacaagatcaagaaaaaggaa
tgcgccgtcctggtggaaacgatcaaggcagtgttgcagcgtgcgattgaaaccggcggc
agcacgttgcgcgacttcgtcaacagcgacggtaaaagtggttatttccagcaggaatat
acggtgtacggcagacacaacgaaccctgcgtctgttgcggcggtttggtgcagaaggaa
gttctggggcagcgcgggacgttttactgcccgaactgccagaaatga
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