Lautropia mirabilis: NCTC12852_00988
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Entry
NCTC12852_00988 CDS
T05799
Symbol
gcvP
Name
(GenBank) Glycine dehydrogenase [decarboxylating]
KO
K00281
glycine cleavage system P protein (glycine dehydrogenase) [EC:
1.4.4.2
]
Organism
lmir
Lautropia mirabilis
Pathway
lmir00260
Glycine, serine and threonine metabolism
lmir00630
Glyoxylate and dicarboxylate metabolism
lmir00670
One carbon pool by folate
lmir00785
Lipoic acid metabolism
lmir01100
Metabolic pathways
lmir01110
Biosynthesis of secondary metabolites
lmir01200
Carbon metabolism
Module
lmir_M00621
Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:
lmir00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
NCTC12852_00988 (gcvP)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
NCTC12852_00988 (gcvP)
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
NCTC12852_00988 (gcvP)
00670 One carbon pool by folate
NCTC12852_00988 (gcvP)
Enzymes [BR:
lmir01000
]
1. Oxidoreductases
1.4 Acting on the CH-NH2 group of donors
1.4.4 With a disulfide as acceptor
1.4.4.2 glycine dehydrogenase (aminomethyl-transferring)
NCTC12852_00988 (gcvP)
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Gene cluster
GFIT
Motif
Pfam:
GDC-P
GcvP2_C
Beta_elim_lyase
Aminotran_5
Eplus_motif
NA-iREase1
DUF6889
Motif
Other DBs
NCBI-ProteinID:
VEH00900
LinkDB
All DBs
Position
1:complement(1229501..1232443)
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AA seq
980 aa
AA seq
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MTDRNDSGSLAGLLAQGQDEFVARHVGPAGDDVTQMLATIGAGSLDALVAETVPGSILLD
PGNKPALSIGEARTEAAALAELAGLAARNQVWRSYLGSGYHGTLTPEPIRRNVLENPGWY
TAYTPYQAEISQGRLEALMVFQQMIIDLTGMEVANASLLDEATAAAEAMTMLRRASTSKA
PGYFVEAGTHPQVIEVIRTRARWLEIPVTVGTLDALDPGTFYGAHLQNPDTEGRVRDLTD
DIARLQAAGLKVCVGTDPLAAVLLKSAGAQGADVVIGSAQRFGIPLGFGGPHAAFMATRQ
KLIRTMPGRIIGTSHDAAGNIAYRMALQTREQHIRRDKATSNICTAQALLANMSAFYAVY
HGPEGLRRIALRTHGMARLLAASVQKQSAALAPEHATWFDTLVYRFPDAAAADAALARAA
GKRINLRRLDDTRVLVALDETVGLADVADLHEALSGHATDLAALQALAAKLAANGDVLPA
ALLRTDPILTHEVFHRFHSETEFVRYLKRLENRDISLVHSMIPLGSCTMKLNAAAEMAPI
TWPSFTDIHPFAPAKQTQGYTDMLAQLGDWLADITGFAGVSFQPNSGAQGEYAGLLAIRE
YLLAQGQTQRNICLIPASAHGTNPASAQLAGLKIVVVACDAHGNIDVADLDAKLAAHRDA
LACLMVTYPSTHGVFEASIRDICRKVHEAGGQVYMDGANMNAQAGLTKPGEIGADVCHLN
LHKTFCIPHGGGGPGMGPIAVAAHLVPHLPAAPHLTGQPADSQPGTVSGAAHGSALITPI
SWMYIRMMGSAGIRQATVMAILNANYIARRLKGHYDVLYTGEHGRVAHECILDLRHFKGQ
YGVSAEDVAKRLMDYGFHAPTLSFPVPDTLMVEPTESESKAELDRFCDAMIRIREEIAEI
AAGTWPADDNPLKNAPHTATEVAGDWSHPYSREQAVFPLPWLKAAKVWPTVKRIDNAAGD
RNPVCTCPPLSDYSQGEHHG
NT seq
2943 nt
NT seq
+upstream
nt +downstream
nt
atgacggatcggaacgactcgggatccctggccggactgctggcacagggacaggatgaa
ttcgtggcgcgtcacgtgggccctgccggggacgacgtgacgcagatgctggccaccatc
ggtgccggctcgctggatgcgctggtggccgagaccgtgccaggcagcatcctgctggat
ccgggcaacaagcccgcgctgtccatcggcgaggccaggaccgaagcggcggcgctggcc
gaactggccgggctggctgcccgcaatcaggtctggcgcagctatctgggcagcggctac
cacggcaccctcacccccgagccgatccgtcgcaacgtgctggagaaccccggctggtac
acagcctacacgccctaccaggccgagatctcgcagggccgcctggaagcgctgatggtc
ttccagcagatgatcatcgacctcaccggcatggaggtggccaacgcctcgctgctggac
gaagccactgcggccgccgaggcgatgaccatgctgcgccgggccagcaccagcaaggcc
cccggctacttcgtcgaggccggcacccatccgcaggtcatcgaggtgatccgcacccgc
gcccgctggctggagatcccggtcacggtgggcacgctggacgcactggatcccggcacc
ttctatggcgcacacctgcagaaccccgacaccgaagggcgcgtgcgcgacctcaccgac
gacatcgcccggctgcaggcagccggcctgaaggtctgcgtaggtaccgacccgctggcc
gccgtgctgctgaagtctgctggcgcccagggcgccgacgtggtgatcggctcggcccag
cgcttcggcatcccgctgggattcggcggcccgcacgccgccttcatggccacccgccag
aagctcatccgcaccatgccgggccgcatcatcggcaccagccacgacgccgccggcaac
atcgcctaccgcatggcgctgcagacacgcgagcagcacatccgccgcgacaaggccacc
agcaacatctgcaccgcccaggccctgctggccaacatgtcggccttctacgccgtctac
catggccccgaggggctgcgccgcatcgcgctgcgcacccacggcatggcccgactgctg
gccgccagcgtgcagaaacagtccgctgcgctcgcccccgagcacgccacctggttcgac
accctggtctaccgcttcccggatgccgctgcggccgacgccgcactggcccgcgccgcc
ggcaagcgcatcaacctgcgccgcctggacgacacgcgcgtgctggtggcgctggacgag
accgtgggcctggccgacgtggccgacctgcacgaagcactctctggccacgccaccgac
ctggccgccctgcaggcgctggctgccaagctggccgccaacggcgacgtgctgccggct
gccctgctgcgcaccgaccccatcctgacgcatgaggtcttccaccgcttccacagcgag
accgagttcgtccgctacctgaaacggctggaaaaccgcgacatctcgctggtgcactcg
atgatcccgctgggatcgtgcacgatgaagctgaacgccgccgccgagatggcgcccatc
acctggccgtccttcaccgacatccacccctttgccccggccaagcagacccagggctac
accgacatgctggcccagctgggtgactggctggccgacatcaccggctttgccggcgtc
tcgttccagcccaactcgggcgcgcaaggcgaatacgccggcctgctggccatccgcgaa
tacctgctggcccagggccagacacagcgcaacatctgcctgatcccggcctcggcgcac
ggcactaaccccgcctcggcccagctggccgggctgaagatcgtggtggtggcctgcgac
gcccacggcaacatcgacgtggccgacctggacgccaagctggccgcccaccgcgacgcg
ctggcctgcctgatggtcacctacccgtccacccacggggtattcgaggccagcatccgc
gacatctgtcgcaaggtgcacgaggccggcggccaggtgtacatggacggcgccaacatg
aacgcgcaggccggcctcaccaagccgggcgagattggcgcggacgtctgccacctgaac
ctgcacaagaccttctgcatcccgcacggcggcggcggcccgggcatgggccccattgcc
gtggccgcccacctggtgccccacctgccggccgccccgcacctgacgggccagcctgcc
gacagccagcccggcaccgtgtccggtgccgcgcatggcagtgcgctcatcacccccatt
tcctggatgtacatccggatgatgggctcggccggcatccgccaggccacggtcatggcc
atcctcaacgccaactacatcgcccgccgcctgaaagggcactatgacgtgctctacacc
ggcgagcacggccgcgtggcgcacgaatgcatcctggacctgcgccacttcaaaggccag
tacggtgtcagcgccgaggacgtggccaagcggctgatggactatggcttccatgccccg
accctctccttcccggtgcccgacacgctgatggtcgagcccaccgaatccgagagcaag
gccgaactggaccgcttctgcgacgcgatgatccgcatccgcgaggaaatcgccgagatc
gccgccggcacctggccggccgacgacaacccgctgaagaacgcgccgcacactgccacc
gaggtggctggcgactggtcgcacccctacagccgcgagcaggccgtcttcccgctgccc
tggctgaaggcggccaaggtctggccgaccgtcaagcgcatcgacaatgccgccggcgac
cgcaacccggtctgcacctgcccgcccctgtcggactattcgcaaggagagcaccatggc
tga
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