Lautropia mirabilis: NCTC12852_01122
Help
Entry
NCTC12852_01122 CDS
T05799
Symbol
rhlE_2
Name
(GenBank) ATP-dependent RNA helicase rhlE
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
lmir
Lautropia mirabilis
Pathway
lmir03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lmir00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
NCTC12852_01122 (rhlE_2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lmir03019
]
NCTC12852_01122 (rhlE_2)
Enzymes [BR:
lmir01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
NCTC12852_01122 (rhlE_2)
Messenger RNA biogenesis [BR:
lmir03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
NCTC12852_01122 (rhlE_2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
ERCC3_RAD25_C
AAA_22
Motif
Other DBs
NCBI-ProteinID:
VEH01163
LinkDB
All DBs
Position
1:1404309..1405949
Genome browser
AA seq
546 aa
AA seq
DB search
MTLSTAPAPEGAQEPATVTFSDFGLHPDVLKAVTAAGYTKPTPIQAKAIPVVMAGHDVMA
AAQTGTGKTAGFALPIINVLMPSASHSASPARHPVRALIIAPTRELADQIHDNVKTYIQF
TPLRSAAVFGGVDMQPQTNALRAGVEILIATPGRLLDHVQQKSVNLSQVQLLVLDEADRM
LDMGFLPDIQRIINLLNPRRQNLMFSATFSDEIRKLAKRFLNEPKLIEVARPNTLAENVE
QTVYHVPSEDLKRDAVGALIRERGIEQVIVFSNTKIGAGRLARHLQKEGFLAEAIHGDKS
QQERLKTLDGFKAGEIKVLVATDVAARGLDIAELPAVINYDLPHSPEDYVHRIGRTGRAG
ASGMALSLMVDHDQKALAEIEKLTKRKLDVQELQLPASARGRGERRSRDDRRGHREGGEE
TARSEDSRGIGAPSRSGRDRGSRREGNLRGHAPSAERAARYPAPQPVVDDPLFHAPYVPS
EPAAAAADAPERGQASAAGGVSTDTPAVIQGGAPAAASGRRGSAPSSAIRRPANKLAVLL
GGKPGG
NT seq
1641 nt
NT seq
+upstream
nt +downstream
nt
atgactttgtcaactgcccccgcgcctgaaggcgcccaggagccggccaccgtcaccttc
agtgatttcggcctgcatcccgacgtgctcaaggccgtcactgccgccggctacaccaag
cctacccccatccaggccaaggccattccggtggtcatggcgggccatgacgtgatggcc
gctgcccagaccggtaccggaaagacggccggctttgcgctacccatcatcaatgtgctc
atgccgtcggccagccatagcgcctcgccggcgcggcacccggtccgcgcgctcatcatc
gcgcccacgcgggagctggccgaccagatccacgacaacgtcaagacctacatccagttc
acgccgctgcgttcggctgccgtcttcggtggcgtcgacatgcagccgcagaccaatgcg
ctgcgcgccggcgtcgagatcctcatcgccacccccggacggctgctggatcacgtccag
cagaagtcggtgaacctgtcgcaggtgcagctgctggtgctggacgaggcggaccggatg
ctggacatgggcttcctgcccgacatccagcgcatcatcaatctgctcaatccgcgccgg
cagaacctcatgttctcggccaccttctcggacgagatccgcaagctggccaagcgcttc
ctgaacgagccgaagctcatcgaggtggcccggcccaacacgctggccgagaacgtcgag
cagacggtctaccacgtgccctccgaagacctcaagcgtgacgcggtgggggcgctcatt
cgtgagcgcggcatcgaacaggtcatcgtcttctccaacaccaagatcggtgccggccgt
ctggcccgccatctgcagaaggaaggcttcctggccgaggccatccacggcgacaagtcc
cagcaggagcgcctgaagacgctggacggcttcaaggccggcgagatcaaggtgctggtg
gccaccgacgtggcggcccgtggcctggacattgccgagctgccggccgtcatcaactac
gatctgccgcattcgcccgaggactacgtgcaccgcatcggccgtaccggccgtgccggc
gcctccggcatggcactgtcgctgatggtcgaccatgaccagaaggcgctggccgagatc
gagaagctcaccaagcgcaagctggacgtgcaggaactgcagctgccggcttctgcacgc
ggccggggtgagcgtcgcagtcgggatgaccgtcgcggccaccgtgaaggtggcgaggag
acggcacgcagcgaggattcgcgtggcattggcgcgccgtcgcgttccggtcgtgatcgt
ggcagccgccgcgagggcaacctgcgcggccatgcgccaagtgccgaacgcgctgcccgc
tatcctgcgccgcagcccgtggtcgacgatccgctctttcatgcgccctatgtgcccagc
gagccggccgcagcggcagcggatgcccccgagcgggggcaggcgtcggctgcaggcggc
gtcagcaccgatacaccggccgtcatccaggggggcgcacccgcagctgcctccggtcgt
cggggctctgcgccttccagcgccatccgccgtcccgcgaacaagctggccgtgctgctg
gggggcaagccggggggctga
DBGET
integrated database retrieval system
