Lautropia mirabilis: NCTC12852_01130
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Entry
NCTC12852_01130 CDS
T05799
Symbol
dnaE_1
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
lmir
Lautropia mirabilis
Pathway
lmir03030
DNA replication
lmir03430
Mismatch repair
lmir03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lmir00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
NCTC12852_01130 (dnaE_1)
03430 Mismatch repair
NCTC12852_01130 (dnaE_1)
03440 Homologous recombination
NCTC12852_01130 (dnaE_1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lmir03032
]
NCTC12852_01130 (dnaE_1)
03400 DNA repair and recombination proteins [BR:
lmir03400
]
NCTC12852_01130 (dnaE_1)
Enzymes [BR:
lmir01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
NCTC12852_01130 (dnaE_1)
DNA replication proteins [BR:
lmir03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
NCTC12852_01130 (dnaE_1)
DNA repair and recombination proteins [BR:
lmir03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
NCTC12852_01130 (dnaE_1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
DNA_pol_IIIA_C
Motif
Other DBs
NCBI-ProteinID:
VEH01179
LinkDB
All DBs
Position
1:1417024..1420635
Genome browser
AA seq
1203 aa
AA seq
DB search
MSQAVSSPASASPDASAAPPASVAADVAVSDAVPSVAEGAEGPGFVHLRMRSEYSVVDSI
VRLDEAVAAAVADGQMALALSDASNLFGWVKFYKQASGKGLQPICAADVWITNAENRDRP
YRLLLIAANNAGYRRLCELLSRAWLENEYKGHAELLPEWLTAETTGGLIALSGAGGGEVG
QFLLAGNHARAVEAAQHWAAAFPDAFYLEVQRDGTPEAESCTRATARLAVELDLPLVATH
PIQFLREEDFRAHEARVCIAEGEVLADPKRVRRFQPTQYFRTRAEMMALFADLPAALANS
VEIARRCAVTLRLGNPQLPIYPTPEGVSIEEYLVHQAEDGLAKRLEKLYPDPEVRAQKAP
EYEARLKRECETIIKMGFPGYFLIVADFIVWAKQNGVPVGPGRGSGAGSLVAFSLGITDL
DPLPYALLFERFLNPERVSMPDFDIDFCQDNRGKVIEYVRRKYGYDAVSQIATFGTMASK
AVIRDAGRVLDMPYNFCDQLSKLIPIEQAKPLSLDKALKAEPQLAERLANEEEVAELFAL
ARPLEDMTRNIGMHAGGVLIAPGKLTDFCPLYRAPGTDSVVSQYDKDDVEAVGLVKFDFL
GLRNLTIIDLAVRYVNERRAREGQEPVDLDNLGFDDQAAYQILRDGNTVAIFQVESDGMK
KLLRKLQPDRFEDIIAVLALYRPGPLGSGMVDDFILRKRGEQAIDYFHPDLKDCLEPTYG
VIVYQEQVMQISQIIAGYTLGGADLLRRAMGKKKAEEMAKQRKTFMEGAAAKGQDPDLAS
QLFDLMEKFAEYGFNKSHTAAYAVVTYQTAWLKAHYPAEFMAATLSSDMDDTDKVQIFVR
DAQANQVEVQPPDINASAYRFEPAAPRAIRYGLGGVKGVGQSAIENVVAAREAGGPFIDL
FDFCERIDRKLINRRTIEALVRAGAFDRLDPDRARLLANVPQAMEAAEQKAREQAAGQGG
LFDDAFFGGTDEAPAREWLPAERWDDRQRLLEEKSALGYFLTGHLFDACRDEVRRFVKTR
IGDLEKIVGKHFGSTPVTVAGIVSGLSTAMTRRGKMVRVMLDDGSGTEEIAVFPEAWDQY
KHLLKEDELVVVQGKLSKDDYSGGHRLSVERILDLGTARGENARALQLTIAGKPDAARLR
ELLMPHRVDGSQGEGCPVEIHYYSDSATAVLRLGHQWAVRPDDALLAGLKGWLTEARVEM
RYR
NT seq
3612 nt
NT seq
+upstream
nt +downstream
nt
atgagccaagccgtctcctcccccgcttccgcttcgcccgacgcttccgctgcccccccg
gcgtcggtggccgcagatgtcgccgtgtccgatgccgtgccgtcggtggctgaaggtgcc
gaggggccgggttttgtccatctgcggatgcgttccgagtattcggtggtcgactccatc
gtgcggctggacgaggccgtggcggcggccgtggccgacgggcagatggcgctggcgctg
tcggatgcgtccaacctgttcggctgggtgaagttctacaaacaggcttcgggcaagggg
ctgcagcccatctgcgcggccgatgtctggatcaccaatgccgagaaccgtgatcggccg
tatcggctgctgctgattgcagccaacaatgccggctaccggcggttgtgcgagctgctt
tccagggcctggctggagaatgagtacaagggccatgccgagctgctgcccgaatggctg
acggcggagacgacgggcgggctgattgcgttgtcgggggccggtggcggcgaggtgggc
cagttcctgctggcaggcaaccatgcccgggcggtcgaggcggcgcaacactgggctgcg
gcgttcccggacgccttctatctggaggtgcagcgcgacggcacgcccgaggccgagagc
tgcacgcgggccacggcgcggctggcggtggagctggacctgccgctggtggccacgcac
cccatccagttcctgcgcgaggaggattttcgggcgcacgaggcgcgggtgtgcattgcc
gaaggcgaggtgctggccgatccgaagcgggtgcggcgcttccagccgacgcagtatttc
cgcacgcgtgcggagatgatggcgctgttcgccgacctgccggcggcgctggccaactcg
gtcgagattgcgcggcgctgtgcggtgacgctgcggctgggcaatccgcagctgcccatc
tacccgacgccggaaggggtgtcgatcgaggagtatctggttcaccaagccgaggacggg
ctggcaaagcggctggagaagctctatcccgatccggaggtgcgggcgcagaaggcaccc
gagtacgaggcgcggctcaagcgcgagtgcgagaccatcatcaagatggggtttccgggc
tacttcctcatcgtggcggacttcatcgtctgggccaagcagaacggggtgccggtgggg
ccggggcggggttcgggtgcgggttcgctggtggcgttctcgctgggcatcaccgatctg
gacccgctgccgtatgcgctgctgttcgagcgcttcctgaacccggaacgggtgtcgatg
cccgacttcgacatcgacttctgccaggacaaccggggcaaggtgatcgagtacgtgcgc
cgcaagtacggctacgacgcggtgtcgcagattgccaccttcggcacgatggccagcaag
gcggtgatccgcgatgcgggccgggtgctggacatgccctacaacttctgcgaccagctc
tccaagctgatcccgatcgagcaggccaagccgctgtcgctggacaaggcgctcaaggcc
gagccgcagctggccgagcggctggccaacgaggaggaggtggcggagctgttcgcgctg
gcgcggccgctggaggacatgacccgcaacatcggcatgcacgccggtggcgtgctgatt
gcgccgggcaagctcacggacttctgtccgctctaccgggcgccgggcaccgattcggtg
gtcagccagtacgacaaggacgatgtggaggcggtgggcctggtgaagttcgacttcctg
ggcctgcgaaacctcaccatcatcgacctggcggtgcgctatgtgaacgagcggcgcgcg
cgcgaggggcaggagccggtggacctggacaacctgggctttgacgaccaggcggcctat
cagatcctgcgtgacggcaacacggtcgccatcttccaggtggaaagtgacgggatgaag
aagctgctgagaaagcttcagcccgaccgtttcgaggacatcatcgccgtgctggcgctg
taccggccggggccgctgggctcgggcatggtggacgacttcatcctgcgaaagcgcggc
gagcaggccatcgactatttccatccggacctgaaggactgcctggagcccacctacggg
gtcatcgtctaccaggagcaggtgatgcagatctcgcagatcatcgccggctacacgctg
ggcggtgccgacctgctgcgccgggcgatgggcaagaagaaggccgaggaaatggccaag
cagcgcaagaccttcatggaaggcgctgcggccaagggtcaggatccggacctggccagc
cagctcttcgacctgatggagaagtttgcagagtacggcttcaacaagtcgcatacggcg
gcctatgcggtggtcacctaccagacggcatggctgaaggcgcattatccggccgagttc
atggcggcaacgctgtcgtcggacatggacgacacggacaaggtgcagatcttcgtgcgc
gatgcgcaggccaaccaggtggaggtgcagccgcccgacatcaacgcatcggcctatcgc
ttcgagccggcggccccgcgcgccatccgctacgggctgggcggtgtgaagggggtcggg
cagtcggccattgagaacgtggtggcggcccgcgaggcgggtggtccgttcatcgatctc
ttcgatttctgcgagcggatcgaccgcaagctgatcaaccggcgcaccatcgaggcgctg
gtgcgcgcgggcgccttcgaccggctggatccggaccgggcgcggctgctggccaatgtg
ccgcaggcgatggaggcggccgagcagaaggcgcgtgagcaggcagccggccagggcggg
ctgttcgatgacgctttcttcgggggcaccgacgaggcaccggcgcgcgaatggctgccg
gccgagcgctgggacgaccgccagcggctgctggaagagaagagcgcgctgggctacttc
ctgacggggcacctgttcgacgcctgccgggacgaggtgcgccgcttcgtgaagacgcgc
atcggcgatctggaaaagatcgtcggcaagcatttcgggtccaccccggtgacggtggcg
ggcatcgtatcaggcctgtccacggccatgacgcggcgtggcaagatggttcgcgtgatg
ctggatgacgggtcgggcaccgaggagatcgcggtctttcccgaggcgtgggaccagtac
aagcacctgctgaaagaagacgagctggtggtggtgcagggcaagctttccaaggacgac
tacagcggcggccaccggctgtcggtggagcgcatcctggacctgggtacggcacgcggt
gagaatgcccgggcgctgcagctgaccatcgctggcaagccggatgcggcacggctcagg
gagctgctgatgccgcaccgggtggacggcagccagggcgagggttgcccggtggaaatt
cattattacagtgacagtgcgaccgccgttctgcggctgggacaccaatgggcagtgcga
cctgatgacgccttgctggccggcctgaagggctggctgaccgaggcacgggtcgagatg
cgctatcgatga
DBGET
integrated database retrieval system
