Lautropia mirabilis: NCTC12852_01933
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Entry
NCTC12852_01933 CDS
T05799
Symbol
recD
Name
(GenBank) Exodeoxyribonuclease V alpha chain
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
lmir
Lautropia mirabilis
Pathway
lmir03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lmir00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
NCTC12852_01933 (recD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lmir03400
]
NCTC12852_01933 (recD)
Enzymes [BR:
lmir01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
NCTC12852_01933 (recD)
DNA repair and recombination proteins [BR:
lmir03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
NCTC12852_01933 (recD)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_19
AAA_30
RecD_N
UvrD_C_2
AAA_11
Viral_helicase1
SH3_13
NAT10_TcmA_helicase
AAA_22
AAA_16
SLFN-g3_helicase
UvrD-helicase
UvrD_C
MdcG_N
AAA_28
HerA_C
nSTAND3
T2SSE
NTPase_1
Motif
Other DBs
NCBI-ProteinID:
VEH02768
LinkDB
All DBs
Position
1:complement(2384531..2386801)
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AA seq
756 aa
AA seq
DB search
MTRGAMTRRGRKPVKDELTGDLFASLPETGGEPEVVLPTDVAGMLALLARWHEEGWLRRI
DLELAHFLAEGAEPSPALPPVLLAAALCSWQLGRGHVCLDLRAVLEQPMPVLSIPIGPWL
QTLTLADWQAACVACPSLVAQPSAMGPADEMSADGARTTPLVLVQQRLYLRRFWQYEQDV
QQGIRQRLMLPGLSEEEEPRLQEALVVLFGGPGSAGAEHAVNVASSAHAAGTQAAGAVGD
AAAEPGRRPDWQRIACALAARRRFGLITGGPGTGKTTTVIRLLALLQWLALAGQGQFLRI
GLAAPTGKAAARLGSSISSAIDRLPLQDVPQGEAIRAAIPRSVSTLHRLLGSRPGTRHFR
HDARNPLPLDVLVIDEASMIDLEMMAQVMHALPPRARLILLGDKDQLASVEAGAILGELC
AHAREGRYWPETADWVARVVQEPIDCGLQADGAEDGTLLDQSVGMLRHSHRFGADSGIGR
LAALVNDGEVARVQRLWDEVRTGCASGQVPDIARIEVDAERWDALRQLVVHGRLDGVPAD
AGPVGYAHYLRWMHRNRPADEAGQDSFDEWAAGVLQAHGRFQLLCALRQGSWGVERLNRQ
IALWLQSAGLLAASEGWYAGRPVIVTRNDYELGLMNGDVGIALAAQGGRLRVAFPAEGGS
RGIRWVLPSRLQAAETVFAMTVHKAQGSEFDHAALAMPAELSPVLTRELVYTAITRARRF
FTLVGPDGLDRILGQAIRSRVLRASGLMAGALQAKD
NT seq
2271 nt
NT seq
+upstream
nt +downstream
nt
atgacgagaggcgcaatgacacggcgaggccgaaaaccggtgaaggacgagctgacgggg
gacctgtttgcttcgttgccggagacagggggggagccggaagtcgtgctgcccacggac
gtggccggcatgctggcgcttctggcacgctggcatgaggagggctggctgcggcgtatc
gatctggagctggcgcattttctggcagagggagcggaaccgtccccggcgttgccgccg
gtgctgctggcggcggcgctgtgcagctggcagctgggacgaggccatgtctgtctggat
ctgcgggcggtgctggagcagccgatgccggtgctgtcgattccgataggcccctggctg
cagacgttgacgctggcggactggcaggcagcctgtgtggcgtgcccatcactggtggcg
cagccgtcggccatggggccagcggatgagatgtccgcagatggggcccggacgacgcca
ctggtgctggtccagcagcgcctgtacctgcggcgtttctggcagtacgagcaggacgtc
cagcaaggcatccggcagcggctgatgctgccgggtctgtccgaggaagaagagcctcgc
ctgcaggaggcgctggtggtgctgtttggcggaccaggcagtgccggggcagagcatgcg
gtaaacgtagccagttcggcgcacgcggccgggacgcaggctgcgggagcggtcggggat
gcggcggcagagcccgggcgcaggccggactggcagcggattgcctgtgcgctggcggca
cggcggcgcttcgggctgatcaccggggggccgggcacaggcaagacgacgacggtgatc
cggctgctggccctgttgcaatggctggcgctggccgggcagggacagttcctgcgtatc
gggctggcggcgcccaccggcaaggcggcggcacgactgggcagctcgatcagcagcgcc
attgaccggctgccgctgcaggacgtgccccagggcgaggcgatccgggcggccattccg
cggtccgtctcgacactgcaccggctgctgggcagccggccgggcacgcggcatttccgg
catgacgcgcgcaatccgctgccgctggacgtgctggtgatcgacgaggcctcgatgatc
gacctggaaatgatggcgcaggtgatgcatgcgctgccacccagggcacggctcatcctg
ctgggggacaaggaccagctggcgtcggtggaggcaggcgccattctgggtgagctgtgt
gcccatgcccgcgagggacgctactggccggagacggccgactgggtggcccgggtggtg
caggagcccatcgactgcgggctgcaggctgacggggcagaagatggcacgttgctggac
cagagcgtcggcatgctgcgtcacagccatcgcttcggggcggacagcggcatcggccgt
ctggcagccctggtcaacgatggcgaggtggcccgggtgcagcgcctgtgggacgaggtt
cggacagggtgtgcgtcgggccaggtgcccgatatcgcccggatcgaggtggacgccgag
cgttgggatgcgttgcggcaattggtggttcatggccggctggatggggtgcctgccgac
gcggggccggtggggtacgcgcattacctgcggtggatgcaccggaaccgtccggcggac
gaggccgggcaggacagcttcgatgaatgggcggccggggtgctgcaggcccatgggcgc
ttccagctgctgtgtgcgctgcgccagggaagctggggggtggagcggctgaaccggcag
attgcgctctggctgcagtcggcgggcttgctggcggccagcgaggggtggtacgcgggg
cggccggtgatcgtcacccgcaatgactacgagctggggctgatgaatggtgacgtgggc
attgcgctggcggctcagggcggccggttgcgggtggcgttcccggccgagggaggcagc
cgtggcattcgctgggtgctgcccagccggttgcaggcggccgagacggtgtttgccatg
acggtgcacaaggcgcagggctcggagttcgaccacgccgcgctggcgatgccggccgag
ctgtcgccggtgctgacccgtgaactggtctatacggccatcacgcgggcacggcgcttc
ttcacgctggtggggcccgacgggctggaccgcattctggggcaggccatccggagccgg
gtgctgcgggccagtggcctgatggcgggggcgctgcaggcgaaggactga
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