Lautropia mirabilis: NCTC12852_02539
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Entry
NCTC12852_02539 CDS
T05799
Symbol
rfbB_2
Name
(GenBank) dTDP-glucose 4,6-dehydratase
KO
K01710
dTDP-glucose 4,6-dehydratase [EC:
4.2.1.46
]
Organism
lmir
Lautropia mirabilis
Pathway
lmir00521
Streptomycin biosynthesis
lmir00523
Polyketide sugar unit biosynthesis
lmir00525
Acarbose and validamycin biosynthesis
lmir00541
Biosynthesis of various nucleotide sugars
lmir01100
Metabolic pathways
lmir01110
Biosynthesis of secondary metabolites
lmir01250
Biosynthesis of nucleotide sugars
Module
lmir_M00793
dTDP-L-Rha biosynthesis, Glc-1P => dTDP-L-Rha
Brite
KEGG Orthology (KO) [BR:
lmir00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
NCTC12852_02539 (rfbB_2)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
NCTC12852_02539 (rfbB_2)
01055 Biosynthesis of vancomycin group antibiotics
NCTC12852_02539 (rfbB_2)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
NCTC12852_02539 (rfbB_2)
00525 Acarbose and validamycin biosynthesis
NCTC12852_02539 (rfbB_2)
Enzymes [BR:
lmir01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.46 dTDP-glucose 4,6-dehydratase
NCTC12852_02539 (rfbB_2)
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Motif
Pfam:
GDP_Man_Dehyd
Epimerase
RmlD_sub_bind
Polysacc_synt_2
3Beta_HSD
NAD_binding_4
Motif
Other DBs
NCBI-ProteinID:
VEH03807
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Position
1:complement(3091630..3092706)
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AA seq
358 aa
AA seq
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MILVTGGAGFIGSNFVLDWLAGSDEPVVNVDKLTYAGNRQNLASLEGNPAHHFEQVDICD
REAIDALLAKYKPRAMVHFAAESHVDRSIHGPAAFVQTNMVGTFTLLEAARQYWNQLQGA
EKENFRFLHVSTDEVYGSLEADDPAFTETTPYQPNSPYSASKAGSDHLVRAYFHTYGMPV
LTTNCSNNYGPYHFPEKLIPLVITNALAGKNLPIYGDGKNVRDWLFVKDHCSAIRRVLEA
GKPGETYNVGGHNEKTNIDIVRQICKLLDEMKPDAAGSYERLITFVKDRPGHDRRYAIDA
AKIGRELGWTPAETFETGIRKTVRWYLDNQDWVANVQSGAYREWIEHNYQDRKGDAKQ
NT seq
1077 nt
NT seq
+upstream
nt +downstream
nt
atgattctcgtgacaggtggtgccggtttcatcggctcgaacttcgtgctggactggctg
gctggcagtgacgagccggtggtcaacgtcgacaagctcacctacgccggaaaccggcag
aacctggcgtcgctggaaggcaatccggcgcaccacttcgagcaggtcgacatctgcgat
cgcgaggccatcgacgcgctgctggccaagtacaagccccgcgccatggtgcacttcgcg
gccgaaagccacgtcgaccgctccatccacggtccggccgccttcgtgcagaccaacatg
gtgggcacgttcacgctgctggaagccgcccgtcagtactggaaccagctgcagggcgcc
gagaaggagaacttccgcttcctgcatgtctccaccgacgaggtctatggttcgctggaa
gccgacgatccggccttcaccgagaccacgccctatcagcccaacagtccgtattcggcc
agcaaggccgggtccgaccacctggtgcgcgcctatttccatacctatggcatgccggtg
ctcaccaccaactgctcgaacaactacgggccctaccacttccccgagaagctcatcccg
ctggtgatcaccaacgcgctggccggcaagaacctgcccatctacggcgacggcaagaac
gtgcgtgactggctgttcgtgaaggaccactgcagcgccatccgccgtgtgctggaagcc
ggcaagccgggcgagacctacaacgtgggcggtcacaacgagaagaccaacatcgacatc
gtgcggcagatctgcaagctgctcgacgagatgaagcccgatgcggccggttcctatgag
cgtctcatcaccttcgtgaaggaccgccccggtcacgaccgccgctatgccatcgacgcc
gccaagattggccgcgagctgggctggacgccggccgagaccttcgagacgggcatccgc
aagacggtgcgctggtacctggacaaccaggactgggtggccaacgtgcagtcgggcgcc
taccgcgagtggatcgagcacaactaccaggatcgcaagggcgacgcgaagcagtga
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