Labrus mixtus (cuckoo wrasse): 132954385
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Entry
132954385 CDS
T10666
Symbol
smurf1
Name
(RefSeq) E3 ubiquitin-protein ligase SMURF1 isoform X1
KO
K04678
E3 ubiquitin ligase SMURF1/2 [EC:
2.3.2.26
]
Organism
lmix Labrus mixtus (cuckoo wrasse)
Pathway
lmix04120
Ubiquitin mediated proteolysis
lmix04137
Mitophagy - animal
lmix04144
Endocytosis
lmix04340
Hedgehog signaling pathway
lmix04350
TGF-beta signaling pathway
lmix04520
Adherens junction
Brite
KEGG Orthology (KO) [BR:
lmix00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
132954385 (smurf1)
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
132954385 (smurf1)
04350 TGF-beta signaling pathway
132954385 (smurf1)
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
132954385 (smurf1)
04137 Mitophagy - animal
132954385 (smurf1)
09144 Cellular community - eukaryotes
04520 Adherens junction
132954385 (smurf1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lmix04131
]
132954385 (smurf1)
04121 Ubiquitin system [BR:
lmix04121
]
132954385 (smurf1)
03029 Mitochondrial biogenesis [BR:
lmix03029
]
132954385 (smurf1)
Enzymes [BR:
lmix01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
132954385 (smurf1)
Membrane trafficking [BR:
lmix04131
]
Endocytosis
Clathrin-mediated endocytosis
Ubiquitin E3 ligases
132954385 (smurf1)
Autophagy
Mitophagy
Other mitophagy associated proteins
132954385 (smurf1)
Ubiquitin system [BR:
lmix04121
]
Ubiquitin ligases (E3)
HECT type E3
132954385 (smurf1)
Mitochondrial biogenesis [BR:
lmix03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
132954385 (smurf1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HECT
WW
C2
Laminin_G_2
Motif
Other DBs
NCBI-GeneID:
132954385
NCBI-ProteinID:
XP_060882914
LinkDB
All DBs
Position
20:18069801..18089586
Genome browser
AA seq
736 aa
AA seq
DB search
MSNPGTRRNGSSIKIRLTVLCAKNLAKKDFFRLPDPFAKVVVDGSGQCHSTDTVKSTLDP
KWNQHYDLYIGKTDSITISIWNHKKIHKRQGAGFLGCIRLLSNAISRLKDTGYQRLDLCK
LNPSDSDAVRGQIVVSLQTRDRIGSGGPVVDCRGLLENDGPVFEGCFSEEPLPYSDPTGA
AGGGNCRLDSPSQENRLQTQRIRGQDSRGHGHTPQNRPHGHQPPDLPEGYEQRTTVQGQV
YFLHTQTGVSTWHDPRIPRDLTSVSCEELGPLPVGWEVRSTVSGRIYFVDHNNRTTQFTD
PRLHTIISQQSQAKDSSQAPQMEVGGEEVGGGGVGGVGGVGGGGGEGDVAARYERDLVHK
LKLLRHELSLQQPQAGHCRIEVSREEIFEESYRQIMKMRPKDLKKRLMVKFRGEEGLDYG
GVAREWLYLLCHEMLNPYYGLFQYSTDNIYTLQINPDSSINPDHLSYFHFVGRVMGLAVF
HGHYINGSFTLPFYKQLLGKPIQLNDLETTDPELHKSLVWILENDITSVLDHTFCVEHNA
FGKFLQHELKPNGRNIPVTEENKKEYVRLYVNWRFMRGIEAQFLALQKGFSELIPQHLLK
PFDHKELELIIGGLGKIDLADWKTNTRLKHCTSESNVVRWFWQAVEAFSEERRGRLLQFV
TGSTRVPLQGFKALQGSTGSAGPRLFTIHLIDANTDNLPKAHTCFNRIDIPPYETYEKLY
EKLLTAVEETCGFAVE
NT seq
2211 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaatcctgggactcggaggaacgggtccagcatcaaaatccgactgacagtatta
tgtgccaaaaacctcgcaaagaaagacttctttcgccttccggatccttttgccaaggtt
gttgtggacggatcaggtcaatgccactctacagacacagtcaagagcacactggacccc
aaatggaatcagcactacgacctttacattggaaagacagactccatcaccatcagtata
tggaaccacaagaagatccataaacgacagggggcgggcttcctgggctgtataagactt
ctttcaaacgccatcagcaggctaaaagacacgggataccagcgtctcgatttatgtaaa
ctgaacccctcggacagtgatgcagtccgggggcagattgtcgtgagcttacaaacacga
gaccgcatcggcagtggaggccctgtggtggactgtagaggactgttggaaaacgatggg
cctgtgttcgagggatgcttcagtgaagagccgctgccctactcagaccccaccggtgca
gcggggggtgggaactgtcgtcttgactcgcccagtcaggagaaccgtcttcaaacacag
cgaatcagagggcaggattcgcgaggccatggacacacaccccagaacagaccccatggg
caccagccgcctgacctaccagagggatacgagcagagaacaacagtacagggccaggtc
tactttcttcacacacagacaggtgtcagcacctggcacgacccccggataccacgggat
ctgaccagcgtgagctgcgaagagcttgggccgctgccagttggctgggaggtccgaagc
accgtgtctggccggatctacttcgtggatcacaacaaccggaccactcagttcacagac
ccgcgtctacacactattatcagccagcaatcccaagcaaaggattcctctcaagccccc
cagatggaagtggggggcgaagaggtgggaggtggaggagttggcggcgtcggaggagtt
ggaggaggagggggcgaaggagacgtagcggcgcgatacgagagagacctggtccataag
ctaaagctgctccgacacgagctgtccctgcagcagcctcaggcaggacactgtcgcatc
gaggtgtcccgagaggagatctttgaggagtcatatcggcagataatgaagatgaggcca
aaagacctgaagaagcgtctgatggtgaagttcagaggagaggagggtctggactacggt
ggagtggccagggagtggctgtacctgctgtgtcatgaaatgttgaacccttattacggc
ctgttccagtactccacagacaatatctacacactacagatcaaccctgactcctccatt
aaccctgaccacctgtcatatttccactttgtgggacgagtcatgggccttgcagttttt
catggtcactacatcaacgggagcttcactctgcccttttacaaacagctactcggcaaa
cccatccagctcaacgacctagagaccaccgaccccgagctgcacaagagcctcgtctgg
atactagagaacgacatcacatcagtccttgaccacacattctgcgtggagcacaatgcc
tttgggaagtttttacagcatgaactcaaacccaacgggcgcaacatccccgtcactgag
gagaacaagaaagaatatgtcagactctatgtgaactggaggtttatgcgaggaattgaa
gcgcagtttctggctctacagaagggattcagtgagctcatcccccagcatctccttaaa
cctttcgaccataaagaactggagctcatcatcggtggtctggggaaaatcgatctggcg
gactggaagacgaacacccgcctgaagcactgcacgagtgagagcaacgtggtgcggtgg
ttctggcaggcggtggaggccttcagcgaggagaggagaggacgcctcctgcagttcgtc
accggctccaccagggtcccactacaggggttcaaagcgttgcagggttctacaggttct
gcaggaccaagactcttcaccattcatttgatagacgccaacacagacaacctgcccaag
gctcacacgtgttttaaccggatagacatccctccctatgagacttatgagaaactttac
gagaaactgctgacggctgtggaggagacctgcggcttcgctgtggagtga
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