Labrus mixtus (cuckoo wrasse): 132954474
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Entry
132954474 CDS
T10666
Name
(RefSeq) E3 ubiquitin-protein ligase SMURF2-like
KO
K04678
E3 ubiquitin ligase SMURF1/2 [EC:
2.3.2.26
]
Organism
lmix Labrus mixtus (cuckoo wrasse)
Pathway
lmix04120
Ubiquitin mediated proteolysis
lmix04137
Mitophagy - animal
lmix04144
Endocytosis
lmix04340
Hedgehog signaling pathway
lmix04350
TGF-beta signaling pathway
lmix04520
Adherens junction
Brite
KEGG Orthology (KO) [BR:
lmix00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
132954474
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
132954474
04350 TGF-beta signaling pathway
132954474
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
132954474
04137 Mitophagy - animal
132954474
09144 Cellular community - eukaryotes
04520 Adherens junction
132954474
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lmix04131
]
132954474
04121 Ubiquitin system [BR:
lmix04121
]
132954474
03029 Mitochondrial biogenesis [BR:
lmix03029
]
132954474
Enzymes [BR:
lmix01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
132954474
Membrane trafficking [BR:
lmix04131
]
Endocytosis
Clathrin-mediated endocytosis
Ubiquitin E3 ligases
132954474
Autophagy
Mitophagy
Other mitophagy associated proteins
132954474
Ubiquitin system [BR:
lmix04121
]
Ubiquitin ligases (E3)
HECT type E3
132954474
Mitochondrial biogenesis [BR:
lmix03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
132954474
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HECT
WW
C2
Motif
Other DBs
NCBI-GeneID:
132954474
NCBI-ProteinID:
XP_060883011
LinkDB
All DBs
Position
20:23921206..23968757
Genome browser
AA seq
769 aa
AA seq
DB search
MSNQGVRRNGPVKLRLTVLCAKNLVKKDFFRLPDPFAKVVVDGSGQCHSTDTVRNTLDPK
WNQHYDLYIGKSDSITISVWNHKKIHKKQGAGFLGCVRLLSNAINRLKDTGYQRLDLNKL
SPNDSDTVRGQIVVSLQSRDRIGTGGPVVDCSRLFDNDLPDGWEERRTASGRIQYLNHIT
RTTQWERPTRPASEYSSPGRPLSCIVDENTPVSTNGATPTTALPPSGGDQRAQERRVRSQ
RHRNYMSRTHLHTPPDLPEGYGYRSLSCQALTAREALVLFWFQSCKTEKDLSNVNCEELG
PLPPGWEIRNTATGRVYFVDHNNRTTQFTDPRLSANLHRVLNPSPNGSRGGIEAQNVSRQ
NQLKDQVQQALVSPAQLPEEAECLTVPKYKRDLVQKLKILRQELSQQQPQAGHCRIEVSR
EEIFEESYRQVMKMRPKDLWKRLMVKFRGEEGLDYGGVAREWLYLLSHEMLNPYYGLFQY
SRDDIYTLQINPDSAVNPEHLSYFHFVGRIMGMAVFHGHYIDGGFTLPFYKQLLGKPITL
DDMESVDPDLHNSLVWILDNDITGVLDHTFCVEHNAYGEIIQHELKPNGKSIQVTQDTKK
EYVRLYVNWRFLRGIEAQFLALQKGFNEVIPQHLLKAFDEKELELIVCGLGKIDINDWKS
NTRLKHCTPDSNSVKWFWKAVESFDEERRARLLQFVTGSSRVPLQGFKALQGAAGPRLFT
IHQIDASTNNLPKAHTCFNRIDIPPYEHYDKLYDKLLTAIEETCGFAVE
NT seq
2310 nt
NT seq
+upstream
nt +downstream
nt
atgtctaaccaaggagttcgtcggaacggccccgtgaagctgcgattaacagtcctctgc
gccaaaaacctggtgaagaaagacttcttccgcctccctgatccattcgcaaaggttgtc
gtggacggttcaggtcaatgccactcgacagacactgtgaggaacacgctcgaccccaag
tggaatcaacactatgacctatacatcgggaaatcagactccatcaccatcagcgtgtgg
aatcacaaaaagatccacaagaagcaaggggctggtttcctgggctgtgtccgccttctg
tccaacgcaatcaaccgccttaaagacaccggctaccagagactagacttgaacaagctg
agtcccaatgacagcgacacagtcagaggacagatagtcgtgagcctgcagtcgagggac
cggataggcacaggaggccccgtggtggactgcagtcgactgtttgacaacgatcttcca
gatggctgggaggagaggaggaccgcgtctggacggatccagtacttgaaccacatcaca
cgcaccacccagtgggagaggccgaccaggcctgcctcagagtactccagccctggtcga
cctctcagctgcatcgtggacgagaacacgcccgtcagcacgaacggagccacgcccacc
acagcattaccccccagtggcggggaccagcgggcccaggagagacgagtccgatcccag
aggcaccgaaactacatgagcaggacccacctgcacacgccccccgacctacctgaggga
tacggttacagatcgctcagctgccaagcgctcacagctcgcgaggctctggttctcttt
tggtttcaatcgtgcaaaacagagaaggatctgagtaatgtgaactgtgaggagctgggt
cctctacctcctggatgggagatacgaaacacggccaccgggagggtctactttgtcgac
cacaacaaccgaaccacgcagttcacagacccgcgcctctccgccaacctgcatcgagtc
ctaaatccaagtcccaacggttccagaggaggcatcgaagcgcagaatgtcagtcgtcag
aaccagttgaaggatcaggtccagcaggctctggtgtcccccgctcagctccccgaggag
gccgagtgcctcacggtgcccaagtacaagcgggacctcgttcagaagctcaagatcctg
cgtcaggaactgtcccagcagcagcctcaggccggtcactgccgcatcgaggtgtcccga
gaggagatctttgaggaatcatatcgacaggtgatgaagatgaggccgaaggacttgtgg
aaaaggctcatggtgaagttcagaggagaggaggggctggattatggaggcgtggccagg
gagtggctctatctgctgtcgcacgagatgctgaacccgtactatggcctgttccagtac
tcccgtgatgacatttacactctgcagataaaccccgactctgctgtcaaccctgagcac
ttgtcgtactttcacttcgtcggtcgtatcatggggatggcggtgtttcacggacactac
atagacggaggattcactctgcctttctacaaacagctgctgggtaaacccatcactctg
gatgacatggagtctgtggaccccgacctgcacaacagcctcgtctggatcctggacaac
gacatcacaggtgtgctggaccacaccttctgtgtcgaacacaacgcgtacggcgagatc
atccagcacgagctgaagcccaacgggaagagcatccaggtcacgcaggacaccaagaaa
gagtacgtccggctctacgtcaactggcgcttcctgcgagggatcgaggctcagttcctc
gctctgcagaaaggtttcaacgaggtcatcccgcagcacctgctgaaggcgttcgacgag
aaggagctcgagctgatcgtgtgcggtctgggtaaaatcgacatcaacgactggaagtcc
aacacgcggctcaaacactgcactccggacagcaacagcgtgaagtggttctggaaggcc
gtggagtcgttcgacgaggagcgccgagcccggctgctgcagtttgtcaccggctcctcc
agagttcccctgcaaggattcaaggcgctccaaggtgctgctggcccgcggctcttcacc
atccaccagattgatgccagcaccaacaacctgcccaaagcccacacctgtttcaaccgg
atcgacattcctccgtacgagcactacgacaaactgtacgacaagctgctcactgccatc
gaggagacgtgcggcttcgctgtggagtga
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