KEGG   Labrus mixtus (cuckoo wrasse): 132954497
Entry
132954497         CDS       T10666                                 
Symbol
rab5c
Name
(RefSeq) ras-related protein Rab-5C
  KO
K07889  Ras-related protein Rab-5C
Organism
lmix  Labrus mixtus (cuckoo wrasse)
Pathway
lmix04137  Mitophagy - animal
lmix04144  Endocytosis
lmix04145  Phagosome
lmix04148  Efferocytosis
lmix05132  Salmonella infection
Brite
KEGG Orthology (KO) [BR:lmix00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    132954497 (rab5c)
   04145 Phagosome
    132954497 (rab5c)
   04137 Mitophagy - animal
    132954497 (rab5c)
   04148 Efferocytosis
    132954497 (rab5c)
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    132954497 (rab5c)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:lmix04131]
    132954497 (rab5c)
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:lmix04147]
    132954497 (rab5c)
   04031 GTP-binding proteins [BR:lmix04031]
    132954497 (rab5c)
Membrane trafficking [BR:lmix04131]
 Endocytosis
  Rab GTPases and associated proteins
   Rab GTPases
    132954497 (rab5c)
 Endosome - Lysosome transport
    132954497 (rab5c)
Exosome [BR:lmix04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   132954497 (rab5c)
  Exosomal proteins of other body fluids (saliva and urine)
   132954497 (rab5c)
  Exosomal proteins of colorectal cancer cells
   132954497 (rab5c)
  Exosomal proteins of bladder cancer cells
   132954497 (rab5c)
GTP-binding proteins [BR:lmix04031]
 Small (monomeric) G-proteins
  Rab Family
   Rab5/17/22/31 [OT]
    132954497 (rab5c)
SSDB
Motif
Pfam: Ras Roc Arf MMR_HSR1 GTP_EFTU Gtr1_RagA RsgA_GTPase AAA_16 MCR_beta
Other DBs
NCBI-GeneID: 132954497
NCBI-ProteinID: XP_060883038
LinkDB
Position
20:14378522..14389421
AA seq 220 aa
MAGRGGPARTNGAAASNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLT
QTVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNTDTFTRAKNWVKELQ
RQASPNIVIALAGNKADLANKRAVDFQEAQAYADDNSLLFMETSAKTAMNVNEIFMAIAK
KLPKNEPQGGAGAAGRARGGVDLQEAAPQGRSGQCCGGGN
NT seq 663 nt   +upstreamnt  +downstreamnt
atggcagggcgaggcggaccagcacggaccaacggcgccgcagcaagcaacaagatctgc
cagtttaagcttgtgctgttgggggagtcggcggtggggaagtccagcttggtgctgcgc
tttgtcaaaggccagttccacgaataccaggagagcaccatcggagccgccttcctcaca
cagaccgtatgtttggatgatacaacggtcaagtttgagatctgggacaccgcgggacag
gaacggtatcatagcttggcgcccatgtactacaggggagcccaggccgccatcgtggtc
tacgacatcactaacacagacacattcacacgtgctaagaactgggtgaaagagctccag
cgacaagccagcccaaacatcgtgattgcactggcaggaaacaaagccgacctggccaac
aagagagctgtagattttcaggaagcacaagcatatgcagatgacaacagtttgctcttc
atggagacttcagccaagactgctatgaatgtcaatgagatttttatggctatagccaag
aagctccctaagaacgagccccagggtggagcgggcgctgccggacgagctcgaggaggc
gtggacctgcaggaagctgcgccgcagggcagaagtggccagtgctgtgggggcgggaac
taa

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