Labrus mixtus (cuckoo wrasse): 132954497
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Entry
132954497 CDS
T10666
Symbol
rab5c
Name
(RefSeq) ras-related protein Rab-5C
KO
K07889
Ras-related protein Rab-5C
Organism
lmix Labrus mixtus (cuckoo wrasse)
Pathway
lmix04137
Mitophagy - animal
lmix04144
Endocytosis
lmix04145
Phagosome
lmix04148
Efferocytosis
lmix05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
lmix00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
132954497 (rab5c)
04145 Phagosome
132954497 (rab5c)
04137 Mitophagy - animal
132954497 (rab5c)
04148 Efferocytosis
132954497 (rab5c)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
132954497 (rab5c)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lmix04131
]
132954497 (rab5c)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
lmix04147
]
132954497 (rab5c)
04031 GTP-binding proteins [BR:
lmix04031
]
132954497 (rab5c)
Membrane trafficking [BR:
lmix04131
]
Endocytosis
Rab GTPases and associated proteins
Rab GTPases
132954497 (rab5c)
Endosome - Lysosome transport
132954497 (rab5c)
Exosome [BR:
lmix04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
132954497 (rab5c)
Exosomal proteins of other body fluids (saliva and urine)
132954497 (rab5c)
Exosomal proteins of colorectal cancer cells
132954497 (rab5c)
Exosomal proteins of bladder cancer cells
132954497 (rab5c)
GTP-binding proteins [BR:
lmix04031
]
Small (monomeric) G-proteins
Rab Family
Rab5/17/22/31 [OT]
132954497 (rab5c)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ras
Roc
Arf
MMR_HSR1
GTP_EFTU
Gtr1_RagA
RsgA_GTPase
AAA_16
MCR_beta
Motif
Other DBs
NCBI-GeneID:
132954497
NCBI-ProteinID:
XP_060883038
LinkDB
All DBs
Position
20:14378522..14389421
Genome browser
AA seq
220 aa
AA seq
DB search
MAGRGGPARTNGAAASNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLT
QTVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNTDTFTRAKNWVKELQ
RQASPNIVIALAGNKADLANKRAVDFQEAQAYADDNSLLFMETSAKTAMNVNEIFMAIAK
KLPKNEPQGGAGAAGRARGGVDLQEAAPQGRSGQCCGGGN
NT seq
663 nt
NT seq
+upstream
nt +downstream
nt
atggcagggcgaggcggaccagcacggaccaacggcgccgcagcaagcaacaagatctgc
cagtttaagcttgtgctgttgggggagtcggcggtggggaagtccagcttggtgctgcgc
tttgtcaaaggccagttccacgaataccaggagagcaccatcggagccgccttcctcaca
cagaccgtatgtttggatgatacaacggtcaagtttgagatctgggacaccgcgggacag
gaacggtatcatagcttggcgcccatgtactacaggggagcccaggccgccatcgtggtc
tacgacatcactaacacagacacattcacacgtgctaagaactgggtgaaagagctccag
cgacaagccagcccaaacatcgtgattgcactggcaggaaacaaagccgacctggccaac
aagagagctgtagattttcaggaagcacaagcatatgcagatgacaacagtttgctcttc
atggagacttcagccaagactgctatgaatgtcaatgagatttttatggctatagccaag
aagctccctaagaacgagccccagggtggagcgggcgctgccggacgagctcgaggaggc
gtggacctgcaggaagctgcgccgcagggcagaagtggccagtgctgtgggggcgggaac
taa
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integrated database retrieval system