Labrus mixtus (cuckoo wrasse): 132954512
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Entry
132954512 CDS
T10666
Symbol
cacna1ia
Name
(RefSeq) voltage-dependent T-type calcium channel subunit alpha-1I isoform X1
KO
K04856
voltage-dependent calcium channel T type alpha-1I
Organism
lmix Labrus mixtus (cuckoo wrasse)
Pathway
lmix04010
MAPK signaling pathway
lmix04020
Calcium signaling pathway
Brite
KEGG Orthology (KO) [BR:
lmix00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
132954512 (cacna1ia)
04020 Calcium signaling pathway
132954512 (cacna1ia)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
lmix04040
]
132954512 (cacna1ia)
Ion channels [BR:
lmix04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
132954512 (cacna1ia)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
PKD_channel
ETRAMP
TMEM208_SND2
Motif
Other DBs
NCBI-GeneID:
132954512
NCBI-ProteinID:
XP_060883054
LinkDB
All DBs
Position
20:complement(7908916..7993240)
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AA seq
2166 aa
AA seq
DB search
MRILVNLLLDTLPMLGNVLLLCFFVFFIFGIIGVQLWAGLLRNRCYLEENFTLSSGMTLP
APYYQPEEDDERPFICSLASDNGIMSCTDVPARREGGRTCCLDREDALHRQSLGLSPEPM
ANGSGAGEALGLCINWNQYYTRCHTGSSNPHKGAINFDNIVYAWIVIFQVITLEGWVEIM
YYVMDAHSFYNFIYFILLIIIGSFFMINLCLVVIATQFSETKQREHQLMQEQRAQCLSSS
TLASMAEPGDCYEEIFQLVCHVLRKAKRRSAAFYYTLRGKPPPAGSGRGTRREHRHSRHP
RSTHCPHQSKQDHSSQPPANSISLTVPQSPDDCPICALSLKEAARAVGDSADAGEEGEED
VVKETGKEENHLEERGDGEKKKTKKKKKKTCFGHCRDIWNDMRRKLWGIVESKYFSRGIM
IAILINTISMGIEHHNQPDELTNVLEICNIVFTSMFTLEMILKLTAFGFFEYLRNPYNIF
DGIIVIISVCEIIGQADGGLSVLRTFRLLRVIKLVRFMPALRRQLVVLMKTMDNVATFCM
LLMLFIFIFSILGMHIFGCKFSLKTEAGDTVPDRKNFDSLLWAIVTVFQILTQEDWNMVL
YNGMASTSPFAALYFVALMTFGNYVLFNLLVAILVEGFQAEGDANRSYSDDDRSSCNFEE
NDKQKDSLHLSDPKICTLTPNGHLDLPALPPCLFQGERLTYPLGSRKNSVISLGRANLEQ
RALYPGRAYQTWGRPLPPQPQALWARRSSWNSLGGCRPCSSSSPTASPGFTPSPARPFYG
YGLGALGGVVGGSLRIRGPRASSSPHRHLHDDLPDEEESLLSPPAVAPRGSLHLPQPMLP
GQFVPRRDRRALSLELPHLLQVPGQPHPPPPPHHPLPPMMLHAPYRKKSFSGGVVISGGG
GLDSLGVLTGVHQDCNGKTPLSALLQPPPRNQTEQAGGVNPQSQLMADVFPQVNNRSKNQ
EDLDDDIEYSLCFRIQKMLEAYRPEWCESREDWSVFLFSPDNKFRQMCQSIIAHKLFDYV
VLAFIFSNCITVALERPKILQGSLERVFLTISNYIFTAIFVSEMTLKVVSMGLYVGEQAY
LRSSWNILDGFLVFVSLIDIVVSMAGGAKILGVLRVLRLLRTLRPLRVISRAPGLKLVVE
TLITSLKPIGNIVLICCAFFIIFGILGVQLFKGKFFYCFGLDVKNITNKSDCLQANYKWV
HHKYNFDNLGQALMSLFVLASKDGWVNIMYHGLDAVGVDQQPVTNNNPWMLLYFISFLLI
VSFFVLNMFVGVVVENFHKCRQHQEVEEAKRREEKRQRRMEKKRRKAQKLPYYSSYGQLR
LWIHTLCTSHYLDLIITFIIAINVITMSLEHFNQPRSLDLALKYCNYFFTSTFVLESVLK
LIAFGFRRFFKERWNQLDLAIVLLSVMGITLEEIEISSALPINPTIIRIMRVLRIARVLK
LLKMATGMRALLDTVVQALPQVGNLGLLFMLLFFIYAALGVELFGELVCNADYPCEGMSR
HATFENFGMAFLTLFQVSTGDNWNGIMKDTLRECPPDHGTNVDYACNPSLQFISPMYFVS
FVLTAQFVLINVVVAVLMKHLDDSNKEAQEEAEMDAEIELELAQGTLCCMGAPGCGGAKM
DKGLVIAGSGPGGPTGGKDRGGSRGDNGDGMRKMRHASAAAHSGGYNSRDSSLYSPAQES
QWLDSVSLLIKDTLEGEMLMIDNLSGSVFHHYSSPPPVCKDCRGHPLEQIRMAEIEQASL
KSEQLSDKSSSPALPDDLSLDEHTAYQLLARECKGRCSSDSRSSEEAGGGGGGHHTQTVV
ESQVQGSGHPCLLALSAGGDADPSLQEMEMQIHQPHMCSPHRSPGGVSNSSNKGRTKDGE
SGASGVSPLFHLPAEFFHPTAAAIPAPPRSRSLRLTRGLRLTSPASWASLRSPGVRSKML
CTQYPSHSDSSLATGSSEGSLQTTLEEGLSFSISPPQNLEFPLPTAPLPLACPITLPEDS
TDISSPVRTLRPRPSPSSALTLQATKGHQRSQSSGRGSTSPGYTRDDSIDPSDEDLGIVI
GSSIGGCGSSQAGNSEHLSETLSSLSLTSLLSPSSLVYPGGAVKKCNSTGSLDQGGLLLS
SRCREGRREILGLEIMDPQGFLANPWTGVLVDTRRGEGRGELGDGEQGFKGKSSSQTTVG
SCRKNR
NT seq
6501 nt
NT seq
+upstream
nt +downstream
nt
atgcgtatcctggtgaacctgctgttggacaccctgcccatgctgggcaacgtgctgctg
ctctgcttctttgtcttcttcatcttcggcatcatcggcgtgcagctgtgggctgggcta
ctgaggaaccgctgctacctggaggagaacttcaccctctcttcaggtatgaccctgccc
gctccgtattaccagccggaggaggacgacgagcgccccttcatctgctccctggcctcc
gacaatggcatcatgtcatgtactgacgtgccggcgaggcgagaaggaggacgcacatgc
tgcctggacagggaggacgcgctccacagacagtctctgggcctgagtcctgagcccatg
gccaacggcagcggcgctggtgaagcactgggactgtgcatcaactggaaccagtattac
actcgatgccacacggggagtagtaacccacacaaaggtgccatcaactttgacaatata
gtgtacgcctggatcgtcatttttcaggtgatcactctggagggctgggtggagatcatg
tattacgtcatggatgcccactccttctacaacttcatctacttcattttactcatcatt
atcggttccttcttcatgatcaacctgtgcctggtcgtcatcgccacccagttctcggag
accaagcagcgggagcaccagctgatgcaggagcagagggcgcagtgcctgtcctcctcc
accctggccagcatggcggagccgggagactgctacgaggagatcttccagctggtctgc
cacgtcctccgcaaggccaagaggaggtctgcggctttctactacacgctcaggggtaag
ccccctccggctggcagtggcagggggaccaggcgcgagcaccggcattcaaggcacccg
agatcaacccactgtccgcaccaaagcaagcaagaccacagctctcagccgccggccaac
tccatcagtctgacggtccctcagagtcctgacgactgccccatatgtgcgctatcgctg
aaagaggcggcgagggccgtgggggactcggccgacgccggggaggaaggcgaggaggat
gttgtgaaagagacgggcaaggaggagaaccatctagaggagaggggagatggagagaaa
aagaagacgaagaagaagaagaagaagacgtgctttggacattgtagagatatttggaat
gatatgaggaggaaactgtggggcatcgtggagagcaaatacttcagcagaggcatcatg
atcgctattctcatcaacaccatcagtatgggcatcgaacatcacaaccagcccgacgag
ctgaccaatgtcctggagatctgcaacatcgtcttcaccagcatgttcaccctggagatg
atcctcaagctgactgctttcggcttcttcgagtacctgaggaacccctacaacatcttt
gatgggatcatcgtcatcatcagtgtgtgtgagatcatcgggcaggcagacggcggtctg
tcagtgctgcggaccttcagactgctgagggtcattaagctggtgaggttcatgccggca
ctcaggcgacagctggtggtgctgatgaagacgatggacaatgtggccacgttctgtatg
ctgctcatgctcttcatcttcatcttcagtatcttggggatgcacatcttcggctgtaag
ttcagcctgaagacggaggcaggagacacggtgcccgacaggaagaactttgactccctg
ctctgggccatcgtcactgtctttcagattctgactcaggaggactggaacatggtgctg
tataacgggatggcgtccacctcgccgtttgcagcgctctactttgtggctcttatgaca
ttcggaaactacgtgctctttaatttactggtcgccatcttggttgagggtttccaagct
gagggtgatgcaaatcgctcctactccgacgacgacaggtcttcttgtaattttgaggag
aatgataagcagaaagactctctgcatctctcagacccaaagatctgtactctaacccct
aatggacacctggacttgcctgcgctgcccccttgtcttttccaaggagaaaggttgacc
tatcctctcggctccaggaagaacagtgttatttctctcggtagggccaacctggagcag
cgggctttgtatccaggccgagcttaccaaacctggggtcgcccactgcctccccagcct
caggccttgtgggcccgtcgatcaagctggaacagccttggagggtgccgcccctgctcc
tcctcatctcccacggctagtcctggcttcaccccgtcccccgcccggcccttctacggt
tacggcctgggggctctcggtggcgtcgtcggaggaagcctgcgcatccgtggtccccgc
gcctcttcgtccccacaccgccacctccacgacgaccttccagacgaggaggagtctctc
ctctctcctcctgccgtggctcctcgcggctcccttcaccttcctcaacccatgctcccc
ggccagtttgtgcccaggagggaccgcagagctctgtcgcttgagctccctcacctgctg
caggttccgggacagccgcaccctccgcccccaccgcaccacccgctgccccccatgatg
ctccacgctccctacaggaagaaaagcttctctgggggggtggtaatcagtggaggcggt
gggcttgacagtctgggtgtcttaacaggggtgcaccaagactgcaatgggaagactcct
ctgtctgctctcctgcagccccctcccagaaaccagactgagcaggctggaggggtgaac
ccccaaagccagctgatggctgacgtcttcccccaagttaacaaccgcagcaagaaccag
gaggacctggatgatgacattgaatatagcttgtgcttccgcatccagaagatgttggag
gcgtacagaccggagtggtgtgagagcagagaggactggtctgtgttcctcttctccccg
gataacaagttcagacagatgtgtcagtcaatcatcgctcacaagctctttgactacgtg
gtcctggccttcatcttctccaactgcatcacggtcgctctggagcggcccaagatactg
cagggaagcttggaaagagtctttctcaccatctccaactacatctttactgcgatcttt
gtgagcgagatgacactcaaggtggtttccatggggctgtatgtgggggagcaggcctat
ctgcggagtagctggaacattctggatggctttctggtttttgtgtctttgattgatatc
gtcgtgtccatggcgggcggggccaagatcctgggcgtgctaagagtgctcaggctgctc
aggacactgcgccccctcagggtgatcagcagagctccagggctgaagctggtggtggag
accctcatcacttccctcaaacctatcggcaatattgtcctcatctgttgtgcatttttc
atcatcttcggcattctcggtgtgcagctttttaaaggcaagttcttctactgctttggg
cttgatgtcaaaaacatcaccaacaagtcggactgtctgcaagccaactacaagtgggtc
catcataagtacaactttgacaacctgggacaggctctgatgtctctgtttgtacttgcc
tcgaaggatggctgggttaacatcatgtatcatggcctggatgctgtgggtgtagaccaa
cagccggtgaccaacaacaatccgtggatgctgctatatttcatctccttcctcctcatt
gtcagcttctttgtcctgaacatgttcgtcggcgtggtggtggagaacttccacaagtgc
cggcagcaccaggaggtggaggaggccaagaggcgcgaggagaagcgtcagcggcgcatg
gaaaagaagaggagaaaagcacagaagctgccctactattccagctatggccaattacgc
ctgtggatccacacactgtgcacaagccactacctggacctcatcatcaccttcatcatc
gccatcaacgtcatcaccatgtccttagagcacttcaatcaacctcgttccctggatctc
gccctgaagtactgcaactatttcttcacctccactttcgtgctggagtcagtactcaaa
ctcattgccttcggctttcgacgcttcttcaaggagaggtggaaccagttggacctggcc
attgtgcttctgtcagtgatgggcatcaccctggaggagatcgagatcagttctgctctg
cccatcaaccccacaatcatcaggatcatgagagtgctgaggatagcccgagtgctgaag
ctgctgaagatggcgacaggaatgagagcccttttggatacggtggttcaagccctgcct
caggtgggtaacctgggcctgctcttcatgctgctgtttttcatctacgccgccttagga
gtagagcttttcggagaacttgtttgcaatgcagactacccatgtgagggtatgagtcgt
cacgctacttttgaaaactttggcatggccttccttactttgtttcaagtctccacgggc
gacaactggaatggcattatgaaggacacattgcgggagtgtccacctgaccacggcaca
aacgtggactacgcctgcaatccgagccttcagtttatctcgcccatgtactttgtctcc
ttcgtgctcaccgcccagtttgtgctcatcaatgtggtggtggccgtgctgatgaagcac
ctggacgactccaacaaggaggcccaagaggaggcggagatggatgcggaaattgagctg
gagctggcccagggcaccctctgttgcatgggcgcccccggctgcgggggtgcaaagatg
gacaagggactggtcattgcgggatcggggcccgggggcccgacgggggggaaggacaga
ggaggttcccgaggagataacggagacgggatgaggaagatgcgtcatgcttcagccgcc
gcccactcaggggggtacaactcccgtgactccagcctgtactcaccagcacaagagagc
cagtggctggacagtgtatctctcctcatcaaggacacgttggagggggagatgctgatg
atcgacaacctctccggttcggtcttccaccactactcctctcctccaccggtctgcaaa
gactgcaggggccacccactagagcagatcaggatggcagagattgagcaggcgtcgctg
aagtcagagcaactttcagacaagtcctcctccccggcgctgccagatgacctcagcctg
gacgaacacacagcctaccagctgttggcaagagagtgcaaggggaggtgcagcagtgat
tcccgcagctccgaggaggccggaggaggaggaggaggtcaccacactcagacggtggtg
gagagtcaggtgcaggggtcgggccatccctgcctcctcgccctcagtgctggtggtgac
gcggatccttcgctgcaggagatggagatgcaaatacaccaaccgcatatgtgctcacct
caccgtagcccaggtggcgtttccaacagcagcaacaaggggaggactaaagatggagaa
agcggtgccagtggagtttctcctctcttccatctgcctgcagagttcttccaccctact
gcagccgccatcccagcacctccacgcagccggagcctacgcctgacgaggggcctcagg
ttgacctctccagcctcctgggcttcgctacgctccccgggagtccgcagcaagatgctc
tgcacgcagtacccctcccacagtgactcgtccctcgccacaggcagctccgagggcagc
ctccagaccactctggaagagggactgagcttcagcatctctccaccacagaacctggag
tttcctttgccgacagctccgcttccgctcgcgtgccccatcacgctgcccgaagacagc
acagacatttcctccccggtgcggaccctgagaccgaggccgagcccctcgtcggccctg
accctccaggccacaaaggggcatcagcggagccagagcagtgggcgaggcagcaccagc
ccgggctacacgcgggacgactccatcgacccttcagacgaggacctgggcatagtcatc
ggatcgtcgattggcggttgtggttccagccaagcggggaacagtgaacacttgtcagag
acgctgagcagcttgtcgctgacatcactgctgtcccccagctctctggtgtaccccggg
ggagcggtgaagaagtgtaacagcacgggcagcctggaccaggggggtttgcttctgtcg
tcccgctgcagagagggccgcagggagatcttgggcctggagatcatggaccctcaaggc
ttcttggccaacccctggactggggtattagtggacacaagaagaggagaaggaagaggg
gagctgggcgacggcgagcagggctttaaagggaagagctcaagccaaacaacagtcggg
tcttgtcggaagaacagatga
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