Labrus mixtus (cuckoo wrasse): 132955086
Help
Entry
132955086 CDS
T10666
Name
(RefSeq) calcium-activated potassium channel subunit alpha-1 isoform X1
KO
K04936
potassium large conductance calcium-activated channel subfamily M alpha member 1
Organism
lmix Labrus mixtus (cuckoo wrasse)
Pathway
lmix04270
Vascular smooth muscle contraction
Brite
KEGG Orthology (KO) [BR:
lmix00001
]
09150 Organismal Systems
09153 Circulatory system
04270 Vascular smooth muscle contraction
132955086
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
lmix04040
]
132955086
Ion channels [BR:
lmix04040
]
Voltage-gated cation channels
Potassium channel, calcium- and sodium-activated (KCa/KNa)
132955086
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Slo-like_RCK
Slowpoke_C
BK_channel_a
Ion_trans
Ion_trans_2
TrkA_N
BNR_3
SR-25
Motif
Other DBs
NCBI-GeneID:
132955086
NCBI-ProteinID:
XP_060883746
LinkDB
All DBs
Position
21:9040653..9131593
Genome browser
AA seq
1274 aa
AA seq
DB search
MPKNREKFNPDPSIHISKMNVIIPFSPDVPCDSNGQRMWWAFLASSMVTFFGGLFIILLW
RTLKYLWTVCCHCNAKKKEVHRLTIGDGIKRTDKEDPAASEVGWMTSVKDWAGVMISAQT
LTGRVLVVLVFALSIGALVIYFIDSSDDIESCQNFYSDFTLQIDMAFNVFFLLYFGLRFI
AANDKLWFWLEVNSVVDFFTVPPVFVSVYLNRSWLGLRFLRALRLIQFSEILQFLNILKT
SNSIKLVNLCSIFISTWLTAAGFIHLVENSGDPWENFQNSQALSYWECVYLLMVTMSTVG
YGDVYAKTTLGRLFMVFFILGGLAMFASYVPEIIELIGNRKKYGGSYSAVNGRKHIVVCG
HITLESVSNFLKDFLHKDRDDVNVEIVFLHNISPNLELEALFKRHFTQVEFYQGSVLNPH
DLARVKIESADACLILANKYCADPDAEDASNIMRVISIKNYHPKIRIITQMLQYHNKAHL
LNIPSWTWKEGDDAICLAELKLGFIAQSCLAQGLSTMLANLFSMRSFIKIEEDTWQKYYL
EGVANEMYTEYLSSAFVGMSFPVICELCYVKLKLLLIAIEHKSDQRESSTLINPGNHVKM
QEGTLGFFIASDAKEVKRALFYCKACHDDITDPKRIKKCGCKKSKTANYKKMTLACCFDC
GRSERDCSCMPVNVCCNTDSPRRHIPLSTVSVNDCSATLRASKNSYNGYIKSIEEDQQLA
LSPKKKQRNGGMRNSPNSSPKIMRHDPLLVPGNEMESMDENVKKYDSTGMFHWCPSKDIE
KVILTRSEAAMTVLSGHVVVCIFGDVKSALIGLRNFVMPLRASNFHYHELKHIVFVGSLE
YLKREWETLHNFPKISILPGTPLSRADLRAVNINLCDMCVILSANQNNIDDASLQDKECI
LASLNIKSMLFDDSIGVLQANSQGFTPPGMDRSSPESSPVHGLVRQTSVTTGGNIPIITE
LAPLAKPGKKLPVISFSQDKSSGTNIQMITELVNDSNVQFLDQDDDDDPDTELYLTQPFA
CGTAFAVSVLDSLMSATYFNDNILTLIRTLVTGGATPELEGLLAEENALRGGYSTPQTLA
NRDRCRVAQLALYDGPFADLGDGGCYGDLFCKALKTYNMLCFGIYRLRDAHLNSQNQCTK
RYVITNPPYAFELVPSDLIFCLMQFDHNAGQSRTSLSHSSHSSHSSSKKSSSVHSIPTSN
RTNRTKSRDSRDKQNATRMNRVSQEKTWFTDEPENTNLRTMHIKPVNTLAVNHVSQFQST
NSLIHPIREAEDEC
NT seq
3825 nt
NT seq
+upstream
nt +downstream
nt
atgccgaaaaaccgggagaaattcaacccggatccgtccatacacatatccaagatgaac
gtgatcatccccttctcgccagatgtgccctgtgacagtaacgggcagcggatgtggtgg
gctttcctcgcctcttccatggtcactttcttcggggggctcttcatcatcctgctgtgg
cgaactctcaaatacctgtggaccgtgtgctgccactgtaacgccaagaagaaggaggtc
catcggctcactataggtgatggcattaagcgcacagacaaggaagacccggcagctagc
gaggtgggctggatgacctcggtaaaagactgggctggagtcatgatttctgctcagacg
ctgacaggacgagtcctggtggtgctggtatttgctctcagcattggagctcttgttata
tacttcatagattcctctgatgatattgagtcgtgtcagaacttctactctgacttcact
ctgcagatcgacatggcgttcaacgtcttcttcctgttgtacttcggcctccgtttcatt
gctgccaatgacaagctgtggttctggctggaggtgaactcggtggtggacttctttacg
gttcctccggtgtttgtgtccgtgtatctgaacaggagctggcttggcttgaggttttta
agggccttgaggctgatacagttctcagaaattttacagtttttgaatatactaaagacg
agcaactctataaagctggtgaacctgtgttcaatctttataagcacatggctgactgca
gcaggattcattcatttggtggagaactcaggggacccttgggaaaatttccagaattcc
caggcactttcctactgggaatgtgtttatttactcatggttactatgtccactgtcggc
tacggagacgtttatgcaaaaaccacgctcggccgcctgtttatggtcttcttcatcctt
ggtggattggccatgtttgcaagctacgtccctgaaatcatagagttaataggaaaccgc
aagaaatatggtggttcctatagtgcggttaatgggagaaagcacatcgtggtctgtggt
catattacactggagagtgtgtccaactttctaaaagacttcctacacaaggacagggat
gatgtcaatgtagaaattgtttttctccataatatttcccctaatcttgagctggaagcc
ttgttcaagcgtcacttcacccaggtggagttttaccaagggtccgtcctgaacccacac
gacctggccagagttaagattgaatcggctgatgcctgtttgatcttagccaacaaatac
tgtgctgaccctgatgctgaggacgcatccaacatcatgagggtaatatctatcaagaac
taccatccgaagatcagaataatcacccaaatgttgcagtaccacaacaaggcccacctc
ttgaacatcccgagctggacctggaaggaaggagatgacgccatttgtctggcggagctg
aaactgggcttcatcgcccagagctgcctggctcagggcctctccaccatgctggcaaac
cttttctccatgaggtccttcatcaagattgaggaggacacatggcagaagtattacctt
gaaggagtagccaatgagatgtacacagagtacctgtccagtgcctttgtgggcatgtct
tttcctgtaatttgcgaactctgctatgtgaagctaaagctcctgctgatagcaatagag
cacaagtctgatcaaagggaaagcagcaccctgataaaccctggaaaccacgtgaaaatg
caggagggaaccctaggcttcttcattgcaagtgatgccaaagaagtaaagagggcactg
ttttactgtaaagcctgccatgatgatatcactgatcccaaaaggataaagaaatgtggg
tgcaagaaatccaagacggccaactacaagaaaatgacactggcatgttgttttgattgc
ggccgctcagagcgggactgctcttgcatgccagttaatgtgtgttgtaacacggactcc
cctcgacgccacatcccactctctactgtctctgttaatgattgctctgccactttacgt
gcctctaaaaatagctataatggatatatcaaatcaattgaagaggaccaacagttggcg
ctatcgcctaaaaaaaagcagcgtaatggaggcatgagaaattcaccaaactcctccccc
aagataatgagacacgacccgctcctcgtcccggggaacgaaatggaaagcatggacgag
aacgtaaagaaatacgactccacggggatgtttcactggtgcccgtccaaagacatcgag
aaggtcattttgacccggagcgaggcggccatgacagtcctgagcggtcatgtggttgtg
tgcatatttggagatgtgaagtcggcgttgatcggtctccgaaacttcgtcatgccccta
agagcgagtaactttcactaccatgagctgaagcacatcgtcttcgtcggctccctcgag
tatctgaagcgagagtgggagacccttcacaattttccaaagatctccattttacctggc
acaccgctgagtcgggcagatctgagggctgtcaacatcaacctctgcgacatgtgtgtc
atcctgtcagccaatcagaacaatattgacgacgcatcactgcaggacaaagaatgcatc
ttggcgtcactcaacatcaaatccatgctgtttgacgacagcatcggggtcttgcaggct
aattcccaaggcttcacaccgccaggcatggatagatcctctcctgaaagcagcccggtc
cacggattagtcaggcagacttctgtcaccactggaggaaatattcccatcataacagaa
ctagcaccattagcaaagccaggcaaaaaactgcctgtgatttcattcagtcaggataaa
agcagtgggaccaacatacaaatgataacagagctggtaaatgactcgaatgttcaattc
ctggaccaagacgatgatgacgacccagacaccgagttatacctcactcagcctttcgcc
tgtgggacagcattcgcagtcagcgtgctggattctttaatgagtgctacatacttcaat
gataatatcctcaccttgatccggacgctggtaacaggcggggcgacgccggagctggag
gggctgctggcagaggagaatgcgttacggggcggctacagcacaccacagaccctggca
aacagggacaggtgtcgcgtggcacagctggccttgtacgacgggcccttcgccgacctc
ggggatggtggttgctatggtgacctattttgtaaagccctgaaaacatacaacatgttg
tgctttggtatctatcggttacgagatgcacacctaaacagtcaaaaccaatgcaccaaa
cggtatgtcattaccaatccaccgtatgcgtttgagctggttccttcagacctgattttc
tgcctgatgcagtttgaccacaatgctggccagtcccgaaccagcctgtcccactcttca
cattcgtcccattcctccagcaaaaagagctcttccgtccactcaatcccaacctccaac
cgcaccaaccgcaccaaaagcagggactcacgagacaaacaaaatgcaacaaggatgaat
agagtgagccaagaaaagacatggtttacagatgaaccagaaaacaccaacctgaggacc
atgcacatcaagcctgtgaatacactcgccgtcaaccacgtcagtcagtttcaatcaaca
aacagcttgattcatcccatcagagaagcagaagacgagtgctga
DBGET
integrated database retrieval system
