Labrus mixtus (cuckoo wrasse): 132955339
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Entry
132955339 CDS
T10666
Symbol
msh2
Name
(RefSeq) DNA mismatch repair protein Msh2
KO
K08735
DNA mismatch repair protein MSH2
Organism
lmix Labrus mixtus (cuckoo wrasse)
Pathway
lmix03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
lmix00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
132955339 (msh2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lmix03400
]
132955339 (msh2)
DNA repair and recombination proteins [BR:
lmix03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
132955339 (msh2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_IV
MutS_I
MutS_II
AAA_27
Motif
Other DBs
NCBI-GeneID:
132955339
NCBI-ProteinID:
XP_060884135
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Position
21:7031800..7043444
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AA seq
935 aa
AA seq
DB search
MAVQPKQNLSMDSAAEHGFLNFVFSMPEKPDTTFRIFDRNDYYTVHGKDAIFAAKEVFKT
NAVIKYLGSGSRKLESVVLSKLNFEAFAKDLLLMKQYRVEVYKNHSKSSKEHDWRIEYKA
SPGNLTQFEEILFGGGAGAEGCAGVVAVRVATGADGQRVVGVGYVDAAQRTMGVCEFPDN
EIFSNLESLLVQISPKECLLAQGDGNTDGIKLREVVQRGGLLVSDRKRAEFKSKDMVQDL
NRLLRAKRGETVASNTLPELDKQVAMSCLAAVVRFLELLSDESNFNSFSLTSLELGQYMR
LDNAAVRALNLFQGSPDDTSGAHSLAGLLNKCRTPQGQRLVNQWIKQPLMDKTKIEERLD
LVESFVCDSELRQTCQEDLLRRFPDMHRLSKKFHRHSASLQDCYRVYQAVSHIPALITAL
DRYSGSYQVLLEAAFLSPFRDLLTDFVKYQEMIETTLDMNQIDHHEFLVKASFDPVLSEL
REKMDELEKSMQSVLNSAARELGLDAGKTVKLESNAMLGFYLRVTCKEEKSLRNNKKFTT
LDVQKNGVRFTNSKLSSLNEEYTKNREEYEEAQNAIVTEILNIASGYVDPLQTLSDVIAQ
LDAVVSLAVASVSAPVPYVRPRLLSDGIRRMELKQARHPCMETDADTAFIPNDITFTQGE
KSFYIITGPNMGGKSTFIRQVGVIALMAQIGCFVPCEKAELSVIDSILARVGAGDSQVKG
VSTFMSEMLETAAILRSATENSLIIIDELGRGTSTYDGFGLAWAISEHVASKIGSFCLFA
THFHELTALAAQQSSVHNLHVTALTTHNTLTMLYRIKPGVCDQSFGIHVAELACFPPAVV
AMAKEKAEELEEFQDPAGEKSERDGEPEAKRRCSEKQVGENLIQDFLEKVKSLPAATMSE
AEVKAALRRMKEELVAKKNSYITDLLARCAPAKTA
NT seq
2808 nt
NT seq
+upstream
nt +downstream
nt
atggcggttcaaccgaaacagaacctgtctatggacagtgcagccgagcatggatttctt
aactttgttttctcaatgccggaaaaaccggacacgactttcaggatatttgaccgcaac
gactactatactgtccacgggaaggacgccatattcgcagcaaaggaagttttcaagacg
aatgcggtcatcaaatacttgggctcagggagtcgtaagctggagagtgtggtcctgagc
aaactgaactttgaggcctttgcgaaagacctgctgctaatgaagcagtacagagtggag
gtgtacaaaaaccacagcaagagcagcaaggagcacgactggaggatcgagtacaaggcc
tctcctgggaacttgactcagtttgaggagattctgtttggtggaggagccggagcggag
ggttgtgcaggagtcgtagcagtgcgtgtggccacaggagctgacgggcagcgcgtggtc
ggggtcggctatgttgacgccgcccagaggacgatgggagtgtgtgagtttccagacaac
gagatcttctccaacctggagtcgctgctcgtccagatcagccccaaagagtgtctctta
gcgcagggcgacggaaacacggacggcattaaacttcgggaggtggtgcagcgtggcggc
ctgctggtctctgacaggaagagagcggagttcaaaagtaaggacatggtgcaggatctg
aacaggctgctgagggccaagagaggagagacggtggccagcaacacgctgcctgagctc
gacaaacaggtggcgatgtcgtgcctggcggcagttgtgcgtttcctcgagcttctctct
gacgagtcaaacttcaactcgttcagtctgacctccctggagctgggtcagtacatgagg
ctcgacaacgctgctgtgagggccctgaacctcttccaggggtcgccggacgacaccagt
ggagctcactcgttggccggtttgttgaacaagtgtcgtacgccgcagggtcagcggctg
gtcaaccagtggatcaaacaaccgctcatggacaaaaccaaaatagaggagaggttggac
ctggtggagagcttcgtgtgtgactcggagctccggcagacctgccaggaagacctgctg
cgtcggtttcctgacatgcaccggctgtccaagaagttccaccgtcactctgcctctctg
caggactgttaccgcgtctaccaggcggtgagccacatccccgccctcatcacagcgttg
gacagatactcagggagctaccaggttctgctggaggctgcgttcctctctcctttcaga
gacctgctgacggactttgttaagtatcaggagatgattgaaaccacgctggacatgaac
cagattgaccatcatgagttcctggtgaaggcgtcctttgaccccgtgttgagtgagctg
agagaaaagatggacgagctggaaaagagcatgcagtccgtgctgaacagtgcagccaga
gaactgggtttggatgctggaaagacggtgaaactggagtcaaacgccatgctgggtttt
tacctgagagtcacctgcaaagaggagaagagtctgaggaacaacaagaagttcaccacg
ctggacgtccagaagaacggcgtgcgcttcaccaacagtaagctgagctccctgaacgag
gagtacacaaagaaccgggaggagtacgaggaggcgcagaacgccatcgtcacagagatc
ttaaacatcgcctcaggttacgtggatcctctgcagacgctgagcgacgtcatagctcag
ctggacgccgtggtgagtctcgccgtggcgtctgtctctgctcccgtgccgtacgttcga
ccccgcctgctgtctgacggcatcagacgcatggagctgaaacaggcgagacacccctgc
atggagacggacgcagacaccgccttcatacccaacgacatcaccttcacccagggagag
aagagcttctatattataacaggaccaaacatgggcggtaagtccacatttatccggcag
gtgggagtgatcgctttgatggctcagatcggctgctttgtgccatgtgagaaggcggag
cttagtgtgattgacagcatcctggcccgggttggagcgggtgacagccaggtgaaagga
gtgtccaccttcatgtccgagatgttggagactgcggccattctgcgctcggccacggag
aactcgctcatcataatcgacgagctcggcagaggaacgtccacttacgacggcttcggt
ttggcctgggccatcagcgaacacgtcgcctctaaaatcggcagcttctgtctgttcgct
actcacttccacgagctgacggcgctcgcagctcagcaatcgtctgtccacaacctgcat
gtcacagcgctgacgacgcacaacacgctcaccatgctgtacagaatcaaacccggtgtg
tgtgatcagagttttggtatccatgttgccgagctggcctgcttcccgccggcagtggtt
gcaatggcaaaggagaaggcggaggagctggaagagttccaggatccggctggagagaag
tcagagcgggacggagagcccgaggcaaagagacgatgctcagagaaacaggtgggcgaa
aacctgatccaagacttcctggagaaggtgaagtcacttcctgctgccaccatgagcgag
gcagaggtgaaggctgcgctcaggaggatgaaagaggagctcgtggccaaaaagaactcg
tacatcacagacctcctcgcacgctgcgctccggctaaaacagcttga
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