Labrus mixtus (cuckoo wrasse): 132955557
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Entry
132955557 CDS
T10666
Symbol
trub1
Name
(RefSeq) probable tRNA pseudouridine synthase 1
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
lmix Labrus mixtus (cuckoo wrasse)
Brite
KEGG Orthology (KO) [BR:
lmix00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
lmix03016
]
132955557 (trub1)
Enzymes [BR:
lmix01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
132955557 (trub1)
Transfer RNA biogenesis [BR:
lmix03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
132955557 (trub1)
Prokaryotic type
132955557 (trub1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
Pus10_C
Motif
Other DBs
NCBI-GeneID:
132955557
NCBI-ProteinID:
XP_060884426
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All DBs
Position
21:complement(13397182..13401578)
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AA seq
286 aa
AA seq
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MAGNISNAAAPITNCLSKLQSVNGLFAIYKKKGPTSADVLNTLKEALLKEAGVKNPNPRK
RKKQSLKMGHGGTLDSAACGVLVVGVGSGTKMLSTMLTGSKKYVAVGELGKATDTLDATG
SVILEKDFEHITRSDFEEKLKAFTGDIMQVPPLYSALKKDGQRLSVLLLKGHKVEAKPAR
PVTVYNLTLQEFNPPLFTLDIECGGGFYVRSLVDDLGKALSSCAHVKELTRTKQGQFTLE
EHTLQEEQWKLEHVLRTLQPCSEPEAGKNCKKPTETDQKKPAENNT
NT seq
861 nt
NT seq
+upstream
nt +downstream
nt
atggcaggaaatataagcaacgctgctgctccgataacaaactgtctttccaaactacag
tctgtgaatggattatttgctatatataaaaagaaagggccgacgtctgcagacgttttg
aacacgctgaaggaagctttactcaaagaggctggtgtaaagaaccccaacccgaggaag
aggaagaagcagagcctgaagatggggcacggagggacgctggacagcgctgcctgcggg
gtgttagttgttggagttgggagtggcacaaagatgctcagcacaatgttgactggttct
aagaaatatgttgctgtgggagaactgggaaaagccacagacactcttgatgccactggt
agtgtgattctggagaaagactttgaacacatcaccaggtcggactttgaagagaagctg
aaagcgtttactggcgacattatgcaagttcctccgctctactcggctctgaagaaagac
ggccagcgtttgtctgtcctgctgttgaaggggcacaaagttgaggccaaaccagcgagg
ccggtgacggtgtacaacctgacgctgcaggagttcaatcctcccctcttcactctggat
atcgagtgtggcgggggattttacgtcagaagcttggtggatgatctgggaaaagctctg
tcatcgtgcgctcatgtgaaggagctgacccgtaccaagcagggtcagttcaccttggag
gagcacaccttacaggaggagcagtggaagctggaacacgtcctgcgaactctgcagccc
tgctccgagcctgaggcgggaaagaactgtaagaaaccgacagagacggaccagaagaaa
ccagcggagaacaacacctga
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