Labrus mixtus (cuckoo wrasse): 132955565
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Entry
132955565 CDS
T10666
Symbol
gspt1
Name
(RefSeq) eukaryotic peptide chain release factor GTP-binding subunit ERF3A isoform X1
KO
K03267
peptide chain release factor subunit 3
Organism
lmix Labrus mixtus (cuckoo wrasse)
Pathway
lmix03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
lmix00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
132955565 (gspt1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lmix03019
]
132955565 (gspt1)
03012 Translation factors [BR:
lmix03012
]
132955565 (gspt1)
Messenger RNA biogenesis [BR:
lmix03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
132955565 (gspt1)
Translation factors [BR:
lmix03012
]
Eukaryotic type
Release factors
132955565 (gspt1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
GTP_EFTU_D2
PAM2
MMR_HSR1
Motif
Other DBs
NCBI-GeneID:
132955565
NCBI-ProteinID:
XP_060884441
LinkDB
All DBs
Position
21:complement(19487700..19496155)
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AA seq
587 aa
AA seq
DB search
MDPTDTAPDSWELEEDAEAPATAAGLQNAFAALNVNAKPFVPNVNAPVFVPSFLQADTEE
IPASDGAPDAVASMEVAETAAPVENGGTEADMTTEEETWEQKEEPGGGGGGGGEEDLESG
GACEEGGAGKKEDEEMMEEEEEEMPIPKVAPAPPDAPKKEHVNVVFIGHVDAGKSTIGGQ
IMYLTGMVEKRTLEKYEREAKEKNRETWYLSWALDTNQEERDKGKTVEVGRAYFETEKKH
FTILDAPGHKSFVPNMIGGASQADLAVLVISARKGEFETGFEKGGQTREHAMLAKTAGVK
HLIVLVNKMDDPTVNWSLERYEECKEKLVPFLKKVGFNPKKDIHFMPCSGLTGANLKDPV
SSECSWYTGLPFIPHLDSLPNFTRSNDGPVRLPIVDKYKDMGTVILGKLESGCISKAQQL
VMMPNRHTVEVLSLLSDDVETDDASPGENLKLRLKGIEEEEILPGFILCSPDNLCHSGRT
FDAQIVIIEHKSIICPGYNAVLHIHTCIEEVQITALICLVDKKTGDKSKTRPRFVKQDQV
CIARLRAAGVICLETFKDFPQMGRFTLRDEGKTIAIGKVLKLVPEKD
NT seq
1764 nt
NT seq
+upstream
nt +downstream
nt
atggacccgaccgacacagccccggattcgtgggagctggaggaggatgccgaggccccg
gccaccgcggcggggcttcaaaacgccttcgccgcccttaacgtgaacgccaagccgttt
gtccccaacgttaacgccccggtgtttgtaccgagcttcctccaggcagacaccgaagag
ataccggcctcagacggtgcccctgatgcagtagcaagcatggaggtggcagaaacagcc
gctccggtggagaatggaggcacagaggcagacatgaccacagaggaggagacgtgggag
cagaaggaggagccggggggaggcggaggaggcggaggcgaggaggacctggagtcggga
ggagcctgtgaggaggggggcgctggaaagaaggaagatgaggagatgatggaggaggaa
gaggaggagatgccgatccccaaagtggctccagccccaccagatgcccccaagaaagag
catgtgaacgtggtcttcatcggccatgtcgatgctggtaaatcaactattggagggcag
atcatgtacctaactggaatggtggagaagagaactctggaaaagtacgaacgagaagcg
aaagaaaagaacagagagacatggtacctgtcgtgggctctggatacaaaccaggaggag
agggacaaggggaagacagtggaggtcggcagagcttactttgagactgagaagaaacac
ttcaccatcctggatgctcccggccacaagagctttgtcccaaacatgattggaggggcg
tcacaagccgacctggccgtgctggtgatttcagcaagaaagggcgagtttgagaccggc
tttgagaaaggtggacagacacgggagcacgccatgctggctaaaactgccggggtgaag
catctcattgtcctcgtcaacaagatggatgaccccactgtgaactggagcctagagagg
tatgaggagtgtaaggagaagctggtgccgtttcttaagaaggtgggcttcaaccccaag
aaggacatccactttatgccttgctctggactcacaggtgccaacctcaaggacccagta
tcttctgaatgctcctggtacacgggtttgccatttattcctcacctggacagtttgcca
aactttaccagatccaacgacggaccagtcagactacctattgttgacaagtacaaggac
atggggacagttatcctggggaagctggagtctggatgtatcagtaaagcccagcagctg
gtcatgatgccaaacaggcacacagtggaggtattgagcctgctcagcgacgatgtggag
acagacgatgcaagtcctggggagaatctgaagttgagattgaagggcatcgaggaggaa
gaaatcctccctggctttatcctctgtagccccgacaacctctgccactccggtcgcacc
tttgatgcacagatcgtcatcattgagcacaaatcaatcatttgtcctggatacaatgca
gttcttcatatccacacctgcatcgaagaagtgcagatcacggccttaatctgtctggtg
gacaagaagacgggggacaaaagcaaaacacgaccacgctttgtcaagcaggatcaggtg
tgtatcgccaggctccgggcagcaggagtcatctgcttagagaccttcaaggacttccct
cagatgggacgattcacgctgcgggacgaaggtaaaaccatcgccattggcaaagtgctg
aagctggtgccagaaaaggactaa
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