Labrus mixtus (cuckoo wrasse): 132956211
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Entry
132956211 CDS
T10666
Symbol
dcp1b
Name
(RefSeq) mRNA-decapping enzyme 1B
KO
K12611
mRNA-decapping enzyme 1B [EC:3.-.-.-]
Organism
lmix Labrus mixtus (cuckoo wrasse)
Pathway
lmix03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lmix00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
132956211 (dcp1b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lmix03019
]
132956211 (dcp1b)
Messenger RNA biogenesis [BR:
lmix03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
132956211 (dcp1b)
mRNA degradation factors
5'-3' decay
Decapping complex
132956211 (dcp1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DCP1
mRNA_decap_C
WH1
Motif
Other DBs
NCBI-GeneID:
132956211
NCBI-ProteinID:
XP_060885498
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All DBs
Position
22:14173984..14187860
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AA seq
670 aa
AA seq
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MTATSAGSSSCLTAKGLDISLAALQRQDPYINNIVDVASQVALYTYNNRGNEWEKTEVEG
TLFIYTRLASPRHGFTIMNRLSMENLTEPITKDLDFQLQHPFLLYRNARLVIHGIWFYDK
EDCQRIAQGMKILTQQEQALAQCQGGWLSPGGGGGVLGLGGGGVLGFGGGGVLGLGGGGV
LGLGGGSEAKGVDIIQMLTKARTEYDKGQSTSEPKEIGGSSVLSGNPNLIKPIPVKPNAQ
DTEGAEPKPLSLATLFGSQQPPKPQPVSPLAAPGVGTGSPSTGKVSRPPVARALTYEETL
NSGRGVTSSQGNVVMPGAVIGGQTVGEDAGHVVALQQQEQPQHCPAIQKLMQGQRGVGGV
LQTLSESPENRLCDNGISLEHHHHHHHLIHHHQQHHLPQHHHHHPQQQQLQPDPIKRLFQ
TQPPPQTSSSFASAAPPLSCSHLPPPPPLQQNPRFSSHPVMVDSVTWSHLHGQQSQQHFV
SLPKPQPEAQHISQSAPAVQGTGVLPTQVTNDQVLQHPQALSSQMSGVVSPHELLQKLQL
VQQEQSLAPHDPPRLGPGLAPRFLGPSQGQGAGSVVPTAGQKAALQFQVISPQRIPATVA
PDMLLSPSVFTQAKSIGGMSANAPSTLSRVLTKSQLQASLLHLIQTDSSFLDTIYEAYVS
RCANDSSTKY
NT seq
2013 nt
NT seq
+upstream
nt +downstream
nt
atgacagcgacttctgcaggtagcagcagctgtctcaccgcaaaaggactagacataagt
ctggcagctttgcaacgacaagacccatacatcaacaacattgtggacgttgccagtcaa
gttgctctgtatacgtataacaacagaggaaacgagtgggagaagacagaggtggaaggc
accctttttatctacacaagactggcatctcccaggcatggtttcaccatcatgaacaga
ctcagtatggagaacttgactgagccaatcaccaaagacctggacttccagctccagcac
cccttcctgctttatcgcaacgcccgattggttatccatgggatttggttctacgataag
gaggactgtcaacgcattgcccaggggatgaagattctgacccagcaggagcaggccctg
gctcagtgtcagggtggatggttgtccccaggaggaggaggcggagtacttggtttaggg
ggaggcggagtacttggtttcggaggaggcggagtacttggtttaggaggaggcggagta
cttggtttaggaggaggtagtgaagcgaagggagtggacatcatccagatgttgaccaaa
gcacgcacagaatatgacaaggggcagtctacatcagagcctaaagagattggtggaagc
agtgttctttctggaaacccaaacctgatcaaaccaatacctgttaaaccaaacgctcag
gacactgaaggtgctgagcctaagcctctctctctggccactctttttggctcccaacag
ccacccaaaccccagccagtctctcctttagctgcccctggagttgggacggggtcacca
tcaacaggaaaagtctctcgcccacctgtagcccgcgcgctaacatacgaggaaacgctg
aactctggaagaggtgtcacctccagtcaggggaatgtggtcatgcctggggctgtgatt
ggaggacaaacagttggtgaagatgcaggacatgttgttgcgctgcagcagcaggagcag
cctcagcactgcccagccatccagaagctcatgcagggacagagaggggtcggaggggtg
cttcagacgttgtcagagtcccccgagaaccggctttgtgacaatgggatttctctggag
catcaccaccaccatcaccatctgatccaccatcaccagcagcaccatcttccgcagcac
catcatcatcatccccagcaacagcagcttcaacctgacccaatcaagagactttttcaa
acacagcctcctcctcaaacctcttcctccttcgcctctgctgcaccgccactgagttgc
tcccaccttcctcctcctcctcctctgcagcagaacccccgtttctcttcccatcctgta
atggtggactctgtgacgtggtcccaccttcatgggcaacaaagccagcagcattttgtc
agcttgcctaagcctcaaccggaggcgcagcacatcagccaatcagctccagctgtacag
ggaacaggtgtgcttccaactcaggtgaccaatgaccaagtcctccaacatccacaagct
ctgtcttcccagatgtccggtgtggtgtcgcctcacgagctcctccaaaagctccagctg
gtccaacaagagcaaagcctggccccccatgatccccctcgactgggaccaggactggcc
ccgcgatttctggggccaagtcaaggtcaaggcgccggctctgtcgtacccactgcaggt
caaaaggctgcactgcagtttcaggtcatttctccccagcggataccagccactgtggcc
cccgacatgctcctctctcccagtgtgttcactcaggcaaagtctattggtggcatgtca
gcaaatgccccttcaaccctatccagagttctgacaaaaagccagcttcaagcctcactg
ctgcatctgatccagaccgacagctcattcctggacaccatctatgaagcctacgttagc
cgctgtgctaacgacagcagcactaagtactga
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