KEGG   Labrus mixtus (cuckoo wrasse): 132957218
Entry
132957218         CDS       T10666                                 
Name
(RefSeq) histone-binding protein RBBP7 isoform X1
  KO
K10752  histone-binding protein RBBP4
Organism
lmix  Labrus mixtus (cuckoo wrasse)
Pathway
lmix03082  ATP-dependent chromatin remodeling
lmix03083  Polycomb repressive complex
lmix04218  Cellular senescence
Brite
KEGG Orthology (KO) [BR:lmix00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    132957218
   03083 Polycomb repressive complex
    132957218
 09140 Cellular Processes
  09143 Cell growth and death
   04218 Cellular senescence
    132957218
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:lmix03036]
    132957218
Chromosome and associated proteins [BR:lmix03036]
 Eukaryotic type
  Nucleosome assembly factors
   Histone chaperones
    CAF-1
     132957218
  Histone modification proteins
   HAT complexes
    HATB complex
     132957218
   HDAC complexes
    Sin3A-HDAC complex
     132957218
   Polycomb repressive complex (PRC) and associated proteins
    PRC2.1
     132957218
    PRC2.2
     132957218
  Centromeric chromatin formation proteins
   Kinetochore proteins
    MIS16-MIS18 complex
     132957218
  Heterochromatin formation proteins
   Other heterochromatin formation proteins
    132957218
  Chromatin remodeling factors
   NuRD complex
    132957218
   NuRF complex
    132957218
   NuRF complex (fruit fly)
    132957218
SSDB
Motif
Pfam: WD40 CAF1C_H4-bd WD40_CDC20-Fz WD40_Prp19 Beta-prop_RIG_2nd Beta-prop_EIPR1 Beta-prop_CAF1B_HIR1 Beta-prop_TEP1_2nd WDR55 EIF3I Beta-prop_EML_2 WD40_WDHD1_1st Beta-prop_WDR75_1st Beta-prop_EML WD40_MABP1-WDR62_2nd WD_LRWD1 Beta-prop_WDR90_POC16_2nd Beta-prop_DCAF12 Beta-prop_WDR19_1st WD40_RFWD3 ANAPC4_WD40 Beta-prop_RIG_1st eIF2A WD40_MABP1-WDR62_1st Beta-prop_IFT140_1st Beta-prop_SPT8 MIOS_WD40 NBCH_WD40 Beta-prop_DCAF4
Other DBs
NCBI-GeneID: 132957218
NCBI-ProteinID: XP_060886579
LinkDB
Position
1:5080861..5089404
AA seq 427 aa
MADKEVYDDAVEERVINEEYKIWKKNTPFLYDLVMTHALEWPSLTVQWLPDVNRPEGKDY
AVHRLALGTHTSDEQNHLVIASVQVPNDDAQFDASQYDSEKGAEFGGFGSVSGKIEIEIK
INHEGEVNRARYMPQNPCIIATKTPTSDVLVFDYTKHPSKPDPSGECHPDLRLKGHQKEG
YGLSWNPNLSGNLLSASDDHTICLWDIGSGPKEGKVVDAKSIFTGHTAVVEDVSWHLLHE
SLFGSVADDQKLMIWDTRSNNPSKASHAVEAHTAEVNCLSFNPYSEFILATGSADKTVAL
WDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLSKIGEEQSAEDAE
DGPPELLFIHGGHTAKISDFSWNPSEPWVICSVSEDNIMQVWQMAENIYNDEEPDNTPAS
ELEAQGS
NT seq 1284 nt   +upstreamnt  +downstreamnt
atggccgataaagaggtgtacgatgacgctgtggaggagagggtcatcaatgaagagtac
aagatctggaagaaaaacactcctttcctgtatgacctggtgatgactcatgctctggag
tggcccagccttactgtccagtggcttccagatgttaacaggcctgaagggaaggactac
gccgtccacaggctggctctggggacccatacatcagatgagcagaaccaccttgtgatc
gctagtgtccaggtaccaaatgatgatgcgcagtttgatgcctcgcagtacgacagcgaa
aaaggagcagagtttggaggctttggatcagtgagcgggaaaatcgagatagagatcaag
atcaaccacgagggagaggtgaaccgagcccgctatatgccccagaatccctgcatcatc
gccaccaagacccccacctctgatgttctggtctttgactacaccaagcacccttcaaag
ccagatcccagtggggagtgtcatcctgatctgaggctgaaaggccaccagaaagaaggc
tatggtctttcctggaatcccaaccttagcggcaacctcctcagcgcctcagacgaccat
accatctgcctgtgggacatcgggtccggcccaaaggaagggaaggtagtggacgccaag
tccatcttcacgggccacacagcagtggttgaagatgtgtcctggcatttgctccatgaa
tccctctttggctcggtggctgacgaccagaaactcatgatatgggacactcggtccaac
aacccgtccaaagccagccacgcagtcgaagctcacactgctgaggtcaactgcctgagc
ttcaacccctacagcgagttcattctggccaccggttctgctgataagactgttgcattg
tgggatctacgaaaccttaaactgaagctccactcctttgagtcccacaaagatgaaatt
ttccaggtacaatggtctcctcacaacgagaccatcctggcctccagcggcaccgaccga
cgtctcaacgtctgggatctcagtaaaatcggtgaggagcagtcggcagaggatgctgag
gatggcccaccagagctgctgttcatccacggtggtcatacagccaagatctctgacttc
tcctggaaccccagtgaaccctgggtcatctgctcagtgtccgaggacaacatcatgcaa
gtctggcagatggctgagaatatctacaacgatgaagagccagacaacacccctgcatca
gagctggaagctcagggatcataa

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