KEGG   Labrus mixtus (cuckoo wrasse): 132957297
Entry
132957297         CDS       T10666                                 
Symbol
smx5
Name
(RefSeq) smx5
  KO
K12621  U6 snRNA-associated Sm-like protein LSm2
Organism
lmix  Labrus mixtus (cuckoo wrasse)
Pathway
lmix03018  RNA degradation
lmix03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:lmix00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    132957297 (smx5)
  09123 Folding, sorting and degradation
   03018 RNA degradation
    132957297 (smx5)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:lmix03019]
    132957297 (smx5)
   03041 Spliceosome [BR:lmix03041]
    132957297 (smx5)
Messenger RNA biogenesis [BR:lmix03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     132957297 (smx5)
  mRNA degradation factors
   5'-3' decay
    Lsm complex
     132957297 (smx5)
Spliceosome [BR:lmix03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   LSm proteins
    132957297 (smx5)
 Complex C
  U2 snRNP components
    132957297 (smx5)
SSDB
Motif
Pfam: LSM SM-ATX DYW_deaminase
Other DBs
NCBI-GeneID: 132957297
NCBI-ProteinID: XP_060886540
LinkDB
Position
3:complement(7793273..7796026)
AA seq 95 aa
MLFYSFFKSLVGKDVVVELKNDLSICGTLHSVDQYLNIKLTDISVTDPEKYPHMLSVKNC
FIRGSVVRYVQLPADEVDTQLLQDAARKEAMQQKQ
NT seq 288 nt   +upstreamnt  +downstreamnt
atgcttttctactcgtttttcaagtccctggtggggaaggatgtagtggtggagctcaaa
aacgacctgagcatctgtggaactcttcattctgttgaccagtacctgaacatcaaactc
acagacatcagcgtcacagatcctgagaagtatccacacatgctgtcggtgaagaactgt
ttcatccgtggctccgtggtccggtacgttcagctgcctgcagatgaagtggacacacag
ctcctgcaggacgccgcacgaaaagaagccatgcagcagaagcagtga

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