Labrus mixtus (cuckoo wrasse): 132957637
Help
Entry
132957637 CDS
T10666
Symbol
atg4b
Name
(RefSeq) cysteine protease ATG4B
KO
K08342
cysteine protease ATG4 [EC:3.4.22.-]
Organism
lmix Labrus mixtus (cuckoo wrasse)
Pathway
lmix04136
Autophagy - other
lmix04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
lmix00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
132957637 (atg4b)
04136 Autophagy - other
132957637 (atg4b)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
lmix01002
]
132957637 (atg4b)
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lmix04131
]
132957637 (atg4b)
03029 Mitochondrial biogenesis [BR:
lmix03029
]
132957637 (atg4b)
Peptidases and inhibitors [BR:
lmix01002
]
Cysteine peptidases
Family C54: Aut2 peptidase family
132957637 (atg4b)
Membrane trafficking [BR:
lmix04131
]
Autophagy
Autophagosome formation proteins
Atg8 conjugation proteins
132957637 (atg4b)
Mitochondrial biogenesis [BR:
lmix03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
132957637 (atg4b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_C54
ATG4_LIR
Motif
Other DBs
NCBI-GeneID:
132957637
NCBI-ProteinID:
XP_060886572
LinkDB
All DBs
Position
3:complement(8305710..8314679)
Genome browser
AA seq
392 aa
AA seq
DB search
MDAATLTYDTLRFGEFEDFPETSEPVWILGKEYNALTEKDEILSDVTSRLWFTYRKNFPP
IGGTGPTSDTGWGCMLRCGQMILGEALMCRHLSRDWRWVKGKKQREEYISILNAFIDKKD
SYYSIHQIAQMGVGEGKPIGQWYGPNTVAQVLKKLAVFDTWSRLVVHVAMDNTVVIEEIK
RLCMPWLDGACAEPEGAGELNGCLEGACALAEEETALWKPLVLLIPLRLGLSDINEAYIE
TLKQCFMLPQSLGVIGGKPNSAHYFIGYVGEELIYLDPHTTQPAVEPCEDAQVQDETYHC
QHPPCRMHICELDPSIAAGFFCRTEDEFDDWCMRIRRLSCKRGGLPMFELVDSQPSHMVI
VDTLNLTPDFSDSDRLERFFDSEDEEFEILSL
NT seq
1179 nt
NT seq
+upstream
nt +downstream
nt
atggatgcagctaccttgacatacgacacacttcgctttggagagtttgaagattttcct
gagacctcagagccggtgtggatcttaggaaaagagtacaatgccctcacagagaaagac
gagattttatcagatgtcacttcacgtctgtggttcacatacagaaaaaacttcccaccg
attggcgggacaggaccaacatcagatacaggatgggggtgtatgttacggtgcggccag
atgatcctaggagaggccttgatgtgtagacatttaagcagagactggagatgggtgaaa
ggaaagaaacaaagagaagagtacatcagtattctcaacgccttcattgacaaaaaagac
agttattattccatccatcaaattgctcaaatgggagttggagagggaaagcctataggc
cagtggtatggacccaacacagtcgcccaggttctaaagaagctggcagtgtttgatacg
tggagcagactggtggtacacgtggcgatggacaacactgtggtcatcgaggagatcaag
cgtctttgtatgccctggctcgacggagcctgtgctgaaccagagggagccggggagctg
aacggctgcctggagggggcgtgtgccctggctgaggaggagacggctctctggaaacct
ctggtcctgctcatccctctcaggctgggcctgagtgatataaatgaggcctacatagaa
accctgaagcaatgcttcatgctgcctcagtcgctgggtgttattggggggaaacccaac
agtgcccattacttcattggttatgtcggcgaggaactcatttatttagacccacacacc
actcagcctgcagtggagccatgtgaagacgcacaggtccaagatgagacataccactgt
cagcacccgccctgtcgcatgcacatctgtgagctggatccatccatcgcagcaggtttc
ttctgcagaacagaggacgagtttgatgactggtgtatgcgcataagaaggctgtcctgc
aaaagaggtggcctgcccatgtttgaactcgtagacagtcagccctcccacatggtcatt
gtggacacccttaaccttactcctgacttctcagactcggacaggttggagcggttcttt
gattcagaggatgaagagtttgagatcctttccctgtga
DBGET
integrated database retrieval system
