Labrus mixtus (cuckoo wrasse): 132958087
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Entry
132958087 CDS
T10666
Symbol
acin1b
Name
(RefSeq) apoptotic chromatin condensation inducer 1b
KO
K12875
apoptotic chromatin condensation inducer in the nucleus
Organism
lmix Labrus mixtus (cuckoo wrasse)
Pathway
lmix03013
Nucleocytoplasmic transport
lmix03015
mRNA surveillance pathway
lmix03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
lmix00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
132958087 (acin1b)
09122 Translation
03013 Nucleocytoplasmic transport
132958087 (acin1b)
03015 mRNA surveillance pathway
132958087 (acin1b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lmix03019
]
132958087 (acin1b)
03041 Spliceosome [BR:
lmix03041
]
132958087 (acin1b)
Messenger RNA biogenesis [BR:
lmix03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
132958087 (acin1b)
Spliceosome [BR:
lmix03041
]
Complex C
Other components
EJC/TREX
132958087 (acin1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RSB_motif
SAP
Motif
Other DBs
NCBI-GeneID:
132958087
NCBI-ProteinID:
XP_060886679
LinkDB
All DBs
Position
23:complement(15029375..15052156)
Genome browser
AA seq
1339 aa
AA seq
DB search
MADEDITLDGKPLQSLRVADLKAALEQRNLPKSGQKNALMKRLKGALMLENLQKSSSSHS
GLQPNSQIGEEMSQNSFIKQYLAKQQELLRQRLEREAQQDDEAEESPAVPEEDDDHSEDN
DSSPFVPDKHHSIPSQASMTREEKGGGDAMMGHAMMASGANMGPSATLHPQESLEAPGAW
MQRAAFLQGHKEPPAPSPPRAVASLSVRVLGQPDRQGLPPVVPRAQEKEGTAPSEPGSAH
PVLHLSRSAGVSAGGRAHEDDDEEDSGDDESEDDDEWGPGPGGVRRGNRVPPQPQQMPPS
VPSTAARSKRKLQPPQHIPPPQVHHTPMQLRHPTPPPSPPPDLFPLPDTPKQSPQDAEER
EGPEAARGPRGVSLPPSSLQRQDSDSSSRSSSPEPSMNRKPGPLSLLVHKMETERAFASA
AGVSGETAHSTAGPTCSTESPLQRLERKRLQESREKEEERERERHEVQDQERRKIEQERA
KKRLEEEKEKESKHLEEEKQRQKEERDRKRKHLEEEKEKERKHQEEEKEKERKRQEEEKV
RKRQEEEKEKERKHQEEEKVRKRREEEKEKERKHQEEEKVRKRQEEEKEKERKHQEEEKV
RKRREEEKEKEKKHQEEEKVRKRQEEEKEKERKRQEEEKEKERKRQEEQKRKEEHQRQEA
AHKGRVVVIQDSSSDSDSNSDSSSRSSQSSSSSREKPRPSKQPKKTDQGRAAEDDRKTVL
VKEAEKRHLSNREVAEPSAAAVTEVEADSESSVAQQPPAGAEPENSEGLLEESTTPKAFT
ARKISLTSSKSSPAATDGGAGESESGAAAGRKRRWGSSTSVTTKKPSISITTDSLKSLIP
DIKINQEAVVALHPEELQLSGDEESLDTSRPDEDQGLKIRRTVTQVVQGNSQENGQTNEE
EEVEKTEKEIVRRTSRDKRKSSVSEESMEVQTSVKLDGDEQKVTPSDSLVRRSISQQKSG
VSITIDDPVRTNRQPSPPHGKVSNIIHVTNLVRPFTLGQLKELLSRTGSLLEEGFWIDKI
KSHCFVTYGTTEEAVATRAALHGFKWPQSNPKVLGVDFCEQDELDFHKGILKPEKEADPV
PQQGAPQPRLPPLMPERDRNRERDRDSNRDRERERDRGAAAGGVGVVRDLWAEREREMER
RERARGEREWDRDKIREFARPGEEEHRSRSRERERRRRERNKSKERKTDKKEKGDEPPAK
LLDDLFLKTKAAPCIYWLPLTEEQVAQRLLDRTQRQKEREQRRKEQEEEDKKREEEEKKE
RLKVREKDSSTTASGGAGGGGGGGGGAGRGADVDRGRERGRDREGDKRRDSGHRPRRPSA
GAGNGRRSRSRSNTRDRRR
NT seq
4020 nt
NT seq
+upstream
nt +downstream
nt
atggcggacgaagatattacgcttgatggaaaacctctacaatcgctcagagtagccgat
ttaaaggcggctctggagcaaagaaacctcccgaaaagcgggcagaaaaacgcactcatg
aagcgactgaaaggggcgctgatgttggagaatcttcagaagtcgtcctcctcccacagt
gggctgcagcccaactcacagattggcgaggagatgagccagaatagcttcataaaacag
tacctggccaaacagcaggagctactccgtcagaggctggagagagaggcccagcaggac
gatgaggcagaagaaagcccagcagtgcctgaagaggatgacgaccactctgaggacaac
gacagctccccctttgtccctgacaagcatcactccataccctcgcaggcctcaatgacg
agggaggaaaaaggaggaggagatgcaatgatgggtcatgcaatgatggcgagtggtgcc
aacatgggcccgtcagctaccctccaccctcaggagtccctcgaggctccgggtgcttgg
atgcagcgggcagcctttcttcaaggacataaagagccaccggcaccctctcctcctcgt
gccgtagcctccctgtccgtgcgcgtcctgggccaaccggaccgccaggggctgccccct
gtggtaccaagagcccaggaaaaagagggcaccgcacccagtgagcccggatcagctcat
cctgtcctacatctaagccgatctgcaggagtctcagcaggaggtcgcgcccatgaggac
gacgatgaagaagacagtggagatgacgaaagcgaggacgatgatgaatgggggcccggg
cccggcggggtacgaaggggtaacagagtgccaccccagccgcagcagatgccccccagt
gtcccgtcaacagctgccagatcaaaacgcaagcttcagcctccgcagcacatcccgcct
cctcaggtacaccacaccccaatgcaactgcgccacccaactcctcctccctctccaccc
cccgacctgttccctctccccgacactccaaagcagagcccacaagacgcagaggagaga
gaaggccctgaagctgctcgtggtccaaggggggtgtctctcccgccttcctccctgcag
aggcaagactctgactccagctctcgttccagcagtcctgagccctccatgaatagaaag
ccagggcccctttctttgctcgtacacaagatggagacagagagggcttttgcctcagct
gcaggtgtttcaggagagacggcacactctacggctgggcctacctgttccactgaatct
ccactgcaaagactggagagaaagaggcttcaagagagcagggagaaggaggaagagagg
gagagggaaagacacgaggtgcaagaccaagaaagaaggaagatagaacaggagcgagcg
aaaaagcgcctggaggaagagaaggagaaagagagcaaacacctggaagaggagaaacag
cgtcagaaagaggagcgcgatagaaagagaaaacatcttgaagaggaaaaagaaaaagag
aggaaacaccaggaagaggaaaaagaaaaagagaggaaacgccaggaagaggaaaaagtg
aggaaacgccaggaagaggaaaaagaaaaagagaggaaacaccaggaagaggaaaaagtg
aggaaacgccgggaagaggaaaaagaaaaagagaggaaacaccaggaagaggaaaaagtg
aggaaacgccaggaagaggaaaaagaaaaagagaggaaacaccaggaagaggaaaaagtg
aggaaacgccgggaagaggaaaaagaaaaagagaagaaacaccaggaagaggaaaaagtg
aggaaacgccaggaagaggaaaaagaaaaagagaggaaacgccaagaagaggaaaaagaa
aaagagaggaaacgccaggaagagcagaagagaaaagaagagcaccagagacaggaggcc
gcccacaaaggcagggtggttgtgattcaggattcttcatcagattccgactccaattcc
gactcctcttcccgctcatcacagtcctcttcctcttccagagagaaaccacgcccctca
aagcagccgaagaagacagaccaaggccgtgcagcagaggatgatagaaagactgtcctg
gtaaaagaggcagagaaacgacatctgtcaaacagggaggtggcggagcccagcgcagcc
gccgtcacagaggtggaagcagactcggaaagctccgtggcccagcagccgcccgccggg
gccgagccagagaacagcgagggcctcctggaggagagcaccactcctaaggctttcacc
gcacgcaagatctccctgacaagcagtaagtcgtccccagccgccacagatggaggagca
ggagagtctgagtccggagctgcagcagggcggaagaggaggtggggctccagcacatca
gtgacgactaagaaaccatccatcagcatcaccaccgactcactgaagtctttgatccca
gacatcaaaataaaccaggaggcggtggtggcgctgcaccctgaggagcttcagctgtct
ggggacgaggagagtctggacacaagccgacctgatgaggaccaaggcctgaagatccga
cgcaccgtcacacaggtcgtccaaggtaacagtcaggaaaatggacagacaaatgaagag
gaggaagtggagaagacggagaaagaaatcgtaagacggacttccagggacaaaaggaag
agcagtgtttctgaggaatccatggaagtgcagacatctgtgaagctcgacggagacgaa
cagaaagtcaccccgagcgacagcctggtgcgtcgctccatcagtcaacagaagtctgga
gtgtcaatcaccattgacgaccccgtccgcacaaacaggcagccgtcgccgcctcatggc
aaagtctccaacatcatccatgtgaccaacctggtacgacctttcactttgggccaactc
aaagagcttctgagcaggacgggcagcttgctggaggagggcttctggatcgacaaaatc
aagtctcactgctttgtcacatacggtacaacagaggaggcggtcgccaccagagctgct
ctccacggcttcaaatggcctcagagtaaccccaaagtcctcggcgttgacttctgtgag
caggatgagctcgactttcacaaaggaatcctgaaaccagaaaaggaggcggaccccgtc
ccccaacaaggagcccctcagccccggctgccccctctgatgcccgagcgagaccggaac
agagagcgagaccgcgacagcaatcgcgacagggagcgcgaacgagaccggggcgccgct
gctggaggggtaggagtggtgagggacctgtgggcggagcgagagagagagatggagcgg
cgggaaagagcccgtggcgaacgggaatgggacagggataagatccgggaatttgcccga
ccgggtgaggaagaacatcgatcccgatcccgagagagagagaggaggaggagagagagg
aacaagagcaaggagaggaagaccgacaagaaagagaaaggagatgagcctcctgccaaa
ctgctggacgacttgttcctgaagaccaaagcagctccatgtatatactggctcccgctc
actgaggagcaggtggcgcagaggcttctggaccgcacacagcgccagaaggagcgggaa
caacggcgcaaggaacaagaggaggaggacaagaagcgagaggaggaggagaagaaggag
aggctgaaggtcagggagaaggacagcagcacaacagcgagtgggggagcaggaggagga
ggagggggagggggaggagctgggcgaggagctgacgtagatagagggagggagcgcggc
cgagacagggagggggacaagaggagggacagcggccaccgacccagacggccatcggca
ggcgcgggaaacggacgacgctctcgtagccgaagcaacacaagggatagacgtcgctga
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