Labrus mixtus (cuckoo wrasse): 132958096
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Entry
132958096 CDS
T10666
Name
(RefSeq) serine/arginine repetitive matrix protein 2-like isoform X1
KO
K10631
E3 ubiquitin-protein ligase Topors [EC:
2.3.2.27
]
Organism
lmix Labrus mixtus (cuckoo wrasse)
Brite
KEGG Orthology (KO) [BR:
lmix00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
lmix04121
]
132958096
03036 Chromosome and associated proteins [BR:
lmix03036
]
132958096
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
lmix03037
]
132958096
Enzymes [BR:
lmix01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
132958096
Ubiquitin system [BR:
lmix04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
132958096
UBL E3 ligases
132958096
Chromosome and associated proteins [BR:
lmix03036
]
Eukaryotic type
Centrosome formation proteins
Centriole proteins
132958096
Cilium and associated proteins [BR:
lmix03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
132958096
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C3HC4
PWI_Topors
zf-C3HC4_2
zf-C3HC4_3
zf-RING_2
zf-RING_UBOX
zf-rbx1
zf-RING_5
zf-C3HC4_4
RING_XB3-XBAT31
Rad50_zn_hook
zf-ANAPC11
Motif
Other DBs
NCBI-GeneID:
132958096
NCBI-ProteinID:
XP_060886695
LinkDB
All DBs
Position
23:21102766..21109124
Genome browser
AA seq
1541 aa
AA seq
DB search
MAPTRMKLRVRRRDHAAEGAGAAAEGGVWQVVEEEASRESRGRGGRRKNNGSAAPPAAAT
SSSSPPATAASSSASASARAVMAAEEASPDSKCPICLDRFNNLAYLDRCLHRFCFPCIQE
WSHNKAECPLCKQPFTSILHSVLAEDDFKEYTPRPAPANSSVAATVAMVAAMASAARNAH
QDWLMLRRHRGADGGEATTRRRRRERGGAGVWEWYLDSPPLAPLPHPAAAAVSPVVAEDS
EEGEEPEEQRRRGRGDLSERGVIFEGLTGLGGAAAPLAPTDRASRQLMTRLAARQRLQRE
GGTVRRLRERETVAFRRALYRCSIRVRGVAGVNGNQGQQQRDITAESFRRHPVHLNRLRP
WLRRELTVLYGAHGSLVDIVQRIIMARLARHGLEDTPTIEEELRPFLLARTDHFLHELVS
FARSPLSLEHYDLQAAYEPPEATLELDGTSSSSDSSSVIAISEGEEEEEGQAGGRAEGDA
HDDVIQTGSCLSLSAWDDETPGPSYSTAEPSCSLSSLSFSPAPQEAANDEGGEKREGEVE
ECLIVGYKKPIAERTPELVQLSSDTEDEEMKKETKEEHPPLTSLTPPLTSLTPPLPYLPT
IPPSSSVTCGDEQEDRLKDGEAGRLRSWSGSSERSRNSVCSLSPATPGDGERRREKDGKR
KGSEEAREKRRRKRRKTTSGREGRRKSGTLYNPNRSIYPALMRQPSRSPSPFHSSADSSS
PLSPPDSTWSYHCSQVSPLTSSISSPSSSSSSSPPLSSQTPLTPSLAHHGEKPGGKRKYK
SRHLDSDDKDPTWRPSSGGPCSEKRRERREKERTRRGRRRERGRTGAQRASGGDGRRRRD
DRSPSVEIVYEGTINASNATQPAARRRRRKRQRQTQHSSSPVIITLDSNSSHDDGNNNNN
NNVDSSSSSPLSSQQTVDFSDLPPLPLMHSAGVGGALNAEFGELPADILDQGTDGSETEP
AGRSRAEGPIAIDHSDSSEGEVDVEKVEESGSAPASDDDNGLKREAGPAGGDAPRTPDLT
QERVAEDLPSDSHLLATILNDLKGIASANLKPDNSSDARKKKRLMDQSNRDVKPAERKRA
FPDLSEERPSNEIKVPACSASPPPLEGRVREEGADMPRLLKQVSPVLSHNRNTPPPLKHK
DASSPHLLPAAPGDPAGGKSQAPPTSHISSEPPPTQTIPPISTLKRRFTSALTASTGSNA
APVDFPLAPPPGGGALNVGIHSTSDKPPVDSSSASGRSSTSAHFVPRYDFNSVCPSKSHA
TRNDVPLGRRSPIDGRPVNSFAPVDLHSAKSGRSKEKVAHTDSASCQVAPVNLRHVAEET
AAGCGVFSGGNPNATSRHKHSTPVGENSSDRVSPSGVSAVLTTTTGASGRSSPVDLLSSS
AASKVRALSTANQEDRLPTRDFSRHVASANEHPSGSGGELIDGHLNRTPSSSPDFTPQQR
KNSSLSRPDADLHADLLLHPDLKPSNRFDPSSDRRLNADDQKPSADSRLKMNSQLAAEDN
RTSSVENHCNSNSSHGAHSDSQSLADEHSTGDFWKTHTRLK
NT seq
4626 nt
NT seq
+upstream
nt +downstream
nt
atggcaccaacgcggatgaaactgcgcgtgcgtcgccgtgaccacgcagccgaaggtgcc
ggcgccgctgcagaaggcggtgtttggcaggtcgtggaggaggaggcgagcagagagagc
cggggtcgaggcggcaggaggaaaaacaacggcagcgctgcacctccagctgctgccacc
tcctcctcgtctcctcccgccaccgccgcctcctcctccgcctcggcctcggcgcgggcg
gtgatggcggcggaggaggcgtcgcccgactcaaagtgtccgatctgtctggatcgcttc
aacaacctggcgtacctggaccgctgcctccatcgcttctgcttcccgtgcatccaggag
tggtcgcacaacaaggctgagtgtccgctctgcaagcagcccttcacctccatcctgcac
tcggtcctcgccgaggacgatttcaaggagtacacgccgcgcccggcgcccgccaacagc
agcgtcgccgccactgtcgccatggtagcagccatggcttcagctgcacggaacgcccac
caggattggctgatgttgaggaggcaccgaggggcggacggaggagaggcgaccacgagg
aggcggaggagagagaggggaggggcgggggtgtgggagtggtacctcgactctcctcct
ctcgcccctcttcctcaccccgccgccgccgccgtctctccggtggttgccgaggacagc
gaggagggggaggagccggaggagcaaaggaggagaggcaggggcgacctctcagagcgt
ggtgtgatattcgaggggctgacaggactcgggggggcggcggctccgttagcgccgact
gatcgggcgtcacgccagctgatgactcgcttggcggcgaggcagcgcctgcagcgagaa
ggcgggaccgtgcggcggctgagggagagagagactgttgctttccgtcgggcgctttac
cgctgcagcatacgggtccgcggcgtagcgggggtcaacggtaaccaggggcaacagcag
cgtgacatcacagccgagagcttccggagacaccccgtccatctgaataggctccgcccc
tggctgcggcgggagctgacggtgctgtacggagcgcacggatcactggtggatatcgtc
caacgcatcatcatggcgagactcgcccgccacggcctggaggacacgcccaccatagaa
gaagagctgcgtcccttcctgttggcccgcacggatcacttcctgcacgagctggtcagc
ttcgcacgctcgccgctcagcctggaacactacgacctgcaggcggcgtatgagccgccg
gaggccacgttagagctcgacggaacgagcagctcctcggacagcagctccgtcatcgcc
atctcggagggcgaggaggaagaggaggggcaggcgggaggaagggcggagggagacgcc
cacgatgatgtcatccaaacaggaagctgcctcagcctgtcggcgtgggacgacgagacg
ccgggcccctcctactccaccgccgagccatcctgttcgctctcctcgctgtcgttcagc
cccgccccccaggaagcggccaatgatgagggaggagagaagcgggagggggaagtggag
gagtgtctgatcgtcgggtacaagaagccgatagcggagcggacgccggagctggtgcag
ctctcgtctgacacggaggacgaggagatgaagaaggagaccaaagaggagcatcctccc
ctcacctccttgactcctcccctcacctccttgactcctcccctcccctacttacccaca
atccctccctcctcgtcagtgacctgcggagacgagcaggaggacaggctgaaggatggc
gaggcggggaggcttcgctcgtggtcgggcagctcggagaggagcagaaactctgtgtgc
tcgctcagccccgccacgcccggagatggcgagcggcggcgggagaaagacgggaagcgg
aaaggaagcgaggaggcgagggagaagagaaggagaaagagaagaaaaacgacatcaggg
agggaggggcggaggaaaagcgggaccctctacaacccgaaccgttccatttatcccgcc
ttgatgcgtcagccctcgcgctcgccctcgccgtttcactcgagcgccgactccagctcg
ccactcagcccgccagactccacctggagctatcactgctcccaggtgtcccctctgacc
tcctccatctcttcaccctcctcctcctcttcctcctcgccaccgctctcctcacagacg
ccgctgaccccctccctcgctcaccacggggagaaacccggcgggaagaggaagtacaaa
agccgacacctggacagcgacgacaaggaccccacgtggaggccgagcagcggcggcccg
tgcagcgagaagaggagggagcgccgcgagaaggagaggacacggagagggaggaggaga
gagagagggaggacgggcgctcaaagggcgagcgggggagacggcaggaggcgcagagac
gaccggagtcccagcgtggagatcgtctacgaggggaccatcaacgcatccaatgccacg
caacccgccgcacgcagacgccgcaggaaacgacaacgccagacacaacacagcagctct
ccggtcatcatcaccctcgacagcaacagcagccacgacgacggcaacaacaacaacaac
aacaacgtggacagcagcagcagcagtcctctcagcagccagcagacggtcgacttctcc
gacctcccgcctctccctctgatgcattctgccggggtgggcggagccctgaatgcagaa
ttcggcgagctccccgccgacatactggaccaaggaactgacgggtcggagacggagccg
gcgggacggtcccgagctgagggtcccatcgccatcgaccacagtgacagcagcgagggg
gaggtggacgtggagaaagttgaagagagcgggtcggcgccggcctcggatgatgataac
gggttaaagagagaggcggggccagcggggggcgacgctcccagaactccagacttaact
caggaaagagtcgctgaagacttgccctcggactcacaccttctagcgaccatcctcaac
gacctgaagggaatcgcttctgctaacttgaaaccagacaactcatcggacgccaggaag
aaaaagcgtttgatggatcaatcgaaccgggacgtcaagccggctgagaggaagcgtgcg
ttccccgatctctcagaggagcggccgtctaacgagatcaaagtgccggcgtgcagtgcc
tcgccgcctcctctcgaggggcgggtcagagaggagggcgcggacatgccccgcctcctg
aaacaagttagtcctgttctgtcgcacaacaggaacacgccgccgcctttaaaacacaaa
gacgcttcgagtccgcacctgctccccgccgcccctggagaccccgcggggggaaagtct
caggctcctcccacctcccacattagttcagagccgcctcccactcagaccatcccgccc
atttcaacactgaagaggcgtttcacgagcgctctcacggcctctacgggcagcaacgca
gcacccgtagacttccctttagctcctcctccaggaggcggagctttgaacgttggtatc
cactccacgagcgacaaacctcccgttgactcttcttctgcgtctggaagaagttccaca
agtgctcattttgtaccgcgttacgactttaactccgtttgtccgtcaaagtcgcacgcc
acccgtaacgacgttcctcttggtcgtcgatctcccatcgacgggcgtcccgtgaattct
tttgctcccgttgatttgcattcggctaaaagtggccggtccaaagagaaggtcgctcac
actgactccgcctcctgtcaggtagcgcccgttaacctccgtcatgtcgcagaggaaacg
gcagcaggttgtggcgttttctcgggaggcaacccaaacgccacgtcacgccacaaacac
tcgacgcccgttggcgagaactcgtcagacagagtgtcaccctctggcgttagcgccgtg
ctaacaacaacaacaggtgctagcggcaggtcgtctcccgtcgaccttctctcttccagc
gcagcttccaaagtgcgtgcgttgtcaacagccaatcaggaggaccgattgccaacccgt
gacttcagccgccatgttgcatccgctaacgaacatccgtctggctcgggcggagaactg
atagacggacacttgaaccgcacgccgtcatcctcccccgacttcacgccacaacagaga
aaaaacagttccctgtcccgaccggatgccgacctccacgccgacctcctcctccacccg
gatttgaaaccttcaaaccgcttcgatccatcctcggaccgacggctcaacgccgacgat
cagaaaccctccgccgactctcgtttgaagatgaactctcagctcgccgccgaagacaat
cgcacctcgtccgttgaaaaccactgcaactcaaactcctcccacggcgcccattcagac
tctcagtcgctcgccgatgaacactcgaccggcgacttctggaaaacacacacacgccta
aaataa
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