Labrus mixtus (cuckoo wrasse): 132958610
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Entry
132958610 CDS
T10666
Symbol
polr2a
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB1
KO
K03006
DNA-directed RNA polymerase II subunit RPB1 [EC:
2.7.7.6
]
Organism
lmix Labrus mixtus (cuckoo wrasse)
Pathway
lmix03020
RNA polymerase
lmix03420
Nucleotide excision repair
Brite
Enzymes [BR:
lmix01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
132958610 (polr2a)
Transcription machinery [BR:
lmix03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
132958610 (polr2a)
DNA repair and recombination proteins [BR:
lmix03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
132958610 (polr2a)
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Other DBs
NCBI-GeneID:
132958610
NCBI-ProteinID:
XP_060887541
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Position
23:9466090..9479199
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AA seq
1965 aa
AA seq
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MHGPPSGDSACPLRTIKRVQFGIISPDELKRMSVTEGGIKYPETTEGGRPKLGGLMDPRQ
GVIERSGRCQTCAGNMTECPGHFGHIELAKPVFHVGFVSKIMKVLRCVCFFCSKLLVDSN
NPKIKDILIKSKGQPRKRLTHVYELCKGKNICEGGEEMDNKFGMEQQETEEDITKEKGHG
GCGRYQPRIRRSGLELFAEWKHVNEDSQEKKILLSPERVHEIFKRISDEEDVILGMDPKF
SRPEWMIVTVLPVPPLAVRPAVVMQGSARNQDDLTHKLADIVKINNQLRRNEQSGAAAHV
IAEDVKLLQFHVATMVDNELPGLPRAMQKSGRPLKSVKQRLKGKEGRVRGNLMGKRVDFS
ARTVITPDPNLQIDQVGVPRSIAANMTFPEIVTPFNIDRLQELVRRGNSQYPGAKYIIRD
NGDRIDLRFHPKPSDLHLQIGYKVERHMCDGDIVIFNRQPTLHKMSMMGHRVRILPWSTF
RLNLSVTTPYNADFDGDEMNLHLPQSLETRAEIQELAMVPRMIVTPQSNRPVMGIVQDTL
TAVRKFTKRDVFLERGEVMNLLMFLSTWDGKVPQPAILKPRPLWTGKQIFSLIIPGHINV
IRTHSTHPDDEDSGPYKHISPGDTKVIVENGELIMGILCKKSLGTSAGSLVHISYLEMGH
DITRLFYSNIQTVVNNWLLIEGHSIGIGDSIADAKTYLDIQNTIKKAKQDVIEVIEKAHN
NELEPTPGNTLRQTFENQVNRILNDARDKTGSSAQKSLSEYNNFKSMVVAGSKGSKINIS
QVIAVVGQQNVEGKRIPFGFKHRTLPHFIKDDYGPESRGFVENSYLAGLTPTEFFFHAMG
GREGLIDTAVKTAETGYIQRRLIKSMESVMVKYDGTVRNSINQVVQLRYGEDGLAGENVE
FQNVATLKPSHKAFEKKFKFDCTNERALRRMLQEDVVKDVLTNAHVQSALEREFEKMKED
RDVLRAIFPTGDSKVVLPCNLARMIWNAQKIFRINIRTPTDLNPLRVVEGLQDLSKKLVI
VNGEDPLSKQAQQNATLLFNIHLRSTLCSKRMTEEFRLSTEAYDWLLGEIETKFNQSIAH
PGEMVGALAAQSLGEPATQMTLNTFHYAGVSAKNVTLGVPRLKELINISKRPKTPSLTVF
LLGQAARDAERAKDILCRLEHTTLRKVTANTAIYYDPNPQNTVVAEDQEWVNVYYEMPDF
DVTRISPWLLRIELDRKHMTDRKLTMEQIAEKINAGFGDDLNCIFNDDNAEKLVLRIRIM
NSDENKFQEDEEVVDKMDDDVFLRCIESNMLTDMTLQGIEQISKVYMHLPQTDNKKKIII
TEDGEFKALQEWILETDGVSLMRVLSEKDVDPVRTTSNDIVEIFTVLGIEAVRKALEREL
YHVISFDGSYVNYRHLALLCDTMTCRGHLMAITRHGINRQDTGPLMKCSFEETVDVLMEA
SSHAESDPMKGVSENIMLGQLAPAGTGCFDLLLDAEKCKYGMEIPTNIPGISVAGPTGMF
FGTVPSPMSGMSPAMTPWNTGATPAYGAWSPSVGSGMTPGAAGFSPSAASDASGFSPGYS
PAWSPTPGSPGSPGPASPYIPSPGGAMSPNYSPTSPAYEPRSPGGYTPQSPGYSPTSPSY
SPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTS
PSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYS
PTSPSYSPTSPNYTPTSPSYSPTSPSYSPTSPSYSPTSPNYTPTSPNYSPTSPSYSPTSP
SYSPSSPRYTPQSPTYTPSSPSYSPSSPSYSPTSPKYTPTSPSYSPSSPEYTPTSPKYSP
TSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPTSPTYTPTSPKYSPTSPTYSPTSPK
YSPTSPTYSPTSPKGSTYSPTSPGYSPTSPTYSPAISPDDSDEEN
NT seq
5898 nt
NT seq
+upstream
nt +downstream
nt
atgcacggaccgccctccggcgacagcgcatgcccattgcgcacgatcaagagagttcaa
ttcggcatcatcagcccagatgaacttaaacggatgtccgttacagaagggggaatcaaa
taccccgaaacaacagaaggaggacgtcctaaactgggcggccttatggacccaagacaa
ggggtcatagagcgaagtggaagatgtcagacatgtgcaggcaacatgacagaatgtccg
ggccactttggacacatagaactggcaaagccagttttccatgttggctttgtatcaaag
ataatgaaggtccttcgatgtgtctgcttcttttgctctaagctattagtggattctaac
aacccaaagatcaaagacatcctgataaaatctaaagggcaaccaaggaaacgtttgaca
catgtgtacgagttgtgcaaaggaaaaaatatctgtgaaggaggagaggagatggacaac
aaatttggaatggagcagcaggagactgaggaggacattaccaaggaaaagggccacggt
ggctgtgggcgctaccaaccgcgcataagacgctctggcttggagctgtttgctgagtgg
aagcacgttaatgaggattcacaggaaaagaaaatcctcctgagtcctgagcgtgtgcac
gagatcttcaagcgcatctccgatgaagaggacgtcattttggggatggacccaaagttt
tccagaccagagtggatgattgtgacagtgttgcctgttcctccgctggccgtcaggccc
gctgtagtcatgcagggctctgctcgcaaccaggacgatttgacccacaaacttgctgac
atcgtcaaaatcaacaaccagctgagaagaaatgagcagagcggtgctgcagctcacgtc
atagctgaagacgtcaaactgcttcagttccacgtggccaccatggtggacaatgagctg
cctggccttcctagggcgatgcaaaagtccggccgtccacttaaatcggtcaaacagcgt
ctaaaagggaaagaggggcgagtccgaggtaacctgatgggaaagcgtgtggacttctct
gctcgaaccgtcatcaccccagaccccaacctgcaaatcgaccaagttggcgtgccgcga
tcgatcgcagccaacatgaccttcccggaaatagtcacaccctttaacatcgacagacta
caagagctcgtgagaagaggcaacagccagtacccaggagccaaatatatcatccgagac
aatggcgacagaattgacctgcgattccacccaaaaccaagcgaccttcacctgcagatt
ggctacaaggtggaaagacacatgtgtgatggagacatcgtcatcttcaacagacaacct
acactacataaaatgtccatgatggggcacagagtccggattctgccgtggtccactttt
cgtctcaacctcagtgtaaccaccccctacaacgctgactttgacggggatgagatgaat
ctccacctgcctcagtcgctggagacgagggcagagatccaggagctggccatggttccc
cgtatgatcgtcacaccccagtccaatagacccgttatgggtattgtgcaggacacactc
acagctgtccgcaaattcaccaaacgagatgtcttcttagagaggggtgaagtgatgaac
ctcctcatgttcctctccacatgggacgggaaagtgcctcagccggccatcctaaagcca
cgtcctctgtggacagggaagcagatcttcagcttaatcattcctggacatattaacgtg
atccgcacacacagcacccaccctgatgatgaagacagcggcccctacaaacacatctcc
cccggggacaccaaggtcatcgtggagaacggcgagttgatcatgggaatcctgtgcaag
aagtctctgggaacgtcagccggctccctcgtccacatctcctaccttgagatgggccac
gacatcaccagacttttttactccaacattcagacggtggtcaacaactggctgctcatc
gagggtcattccattggtatcggtgactccattgctgacgccaagacctaccttgacatt
cagaacacaatcaagaaagccaaacaggatgtgatagaagtcatcgagaaagcccacaac
aacgagctggagccgaccccaggtaacaccctgaggcagacctttgagaaccaggtgaat
cgtatcctcaacgacgctcgagacaaaacaggatcctcagcccagaagtcgctgtctgag
tacaacaacttcaagtccatggtggtggctggttccaagggttcaaagattaacatctca
caggtcattgccgtggtggggcagcagaacgttgagggtaaacgtatccccttcggcttc
aaacaccgcacgctgcctcacttcattaaagacgactacggccctgagagcagaggcttt
gtggagaactcctacctggccggtttgacgccgacagagttcttcttccacgctatggga
ggcagagagggtctcatcgatacagctgtcaagactgctgagactggttacatccagcgt
cgtctgatcaaatccatggagtctgtgatggtgaagtacgacgggacggtgcgtaactcc
atcaaccaggtggttcagctgcgttatggagaggacggcctcgcaggagagaacgtggag
tttcagaacgtggctacactcaaaccctcacacaaggcctttgaaaagaagttcaagttc
gactgcaccaacgagcgtgcactgaggcggatgctgcaggaagatgtcgtgaaagacgtc
ctgacaaacgcccatgtgcagagtgctttggagagggagtttgagaagatgaaggaggac
agggatgtcctcagagccatcttccccactggggacagcaaggtggttctgccatgcaac
ctggccagaatgatttggaacgcccagaagatcttccgcatcaacattcgaactccaaca
gacctcaatcctctgagagtggtcgaaggtcttcaggacctgagtaagaagctggtgatt
gtgaatggtgaagacccactcagcaaacaggcccagcaaaacgccactctgctctttaac
atccacctgcgctccacgctttgctccaaacgcatgacggaggagttccgcctttccacc
gaggcttacgactggctgcttggagagatcgagaccaaattcaaccagtccattgcccat
ccaggggagatggtcggtgctctggccgctcagtcgctgggagaaccagccacccagatg
accctgaacactttccattacgctggtgtgtccgccaagaacgtaacactcggtgtgcct
cgtctgaaggagttgatcaacatctccaagaggcccaaaacgccctctctgaccgtgttc
ctgctgggtcaggctgcacgtgacgcagagagggccaaggacatcctctgtcgactggag
cacactacactaagaaaggttacagccaacaccgccatctactacgacccaaatcctcag
aacacagtggtggctgaggatcaggagtgggtgaatgtctactatgagatgcccgacttc
gatgtcactcgaatttcaccgtggctgctgcgcatcgagctcgaccgcaaacatatgacg
gaccgcaagctgaccatggagcagattgcggagaagatcaatgcaggattcggagacgac
ctgaattgtattttcaatgacgacaatgccgagaaactcgtcctgcgaatcagaatcatg
aacagcgacgagaacaagttccaagaggatgaggaggtggtggataaaatggacgacgat
gtgttcttgaggtgcatagagtccaacatgctcacagacatgacgctgcaaggcatagag
cagatcagcaaggtgtacatgcacttgccccagactgacaacaagaagaagatcatcatc
acagaggacggtgagttcaaggccctgcaggagtggatcctggagacagacggcgtgagc
ctcatgagggtcctcagtgagaaagacgtggaccccgtcaggaccacctccaatgacatc
gtggagatcttcacggtgctgggtattgaagcagtgcgaaaggcgcttgagagggagttg
taccacgtcatttcctttgacggctcctacgtcaactaccgtcacttggctctgctttgt
gacaccatgacatgtcgcggtcacctgatggccatcacgcgtcacggcataaaccgtcaa
gacacaggaccgctcatgaagtgttcctttgaggagacggttgatgtgttgatggaggcg
tcatcccatgctgagagtgaccccatgaagggtgtatcggagaacattatgctcggccag
ctcgcccccgctggtacaggctgctttgacctgctgttggatgctgagaagtgtaaatat
ggcatggagattcctacgaacatacctggcatcagcgtggcaggacccactggtatgttc
tttggcacggtgccaagtcccatgagtggtatgtctcctgccatgaccccctggaacacc
ggagcgacaccagcttacggtgcctggtcccccagtgttgggagcggaatgactcctgga
gcggcaggtttctctcccagtgcagcatcagatgcaagcggtttctcgccgggctactcc
ccagcctggtccccaactccagggtctccaggatctccaggccctgcaagcccatacatc
ccatctccaggtggagcaatgtcaccaaactactcccccacctcccccgcctacgagcca
cgttcccctggaggctacaccccacagagccccggctactccccaacgtctccctcctac
tcccccacttctccttcttactcccccaccagccccaactacagcccgacatctccctcc
tactcacccacctccccgagttactccccgacctccccgtcctattcgccaacttctcca
tcttattccccaacgtctccctcttactcccccacctccccatcctactcacccacatcc
ccatcctactctccaacctcgccgagctacagcccaacatcgccaagctacagcccgacg
tcacccagctactcccccacctcgccgtcttattcacccacatccccctcctattctcca
acatctccctcttactcccccacctccccatcctactcccccacttctccctcctactcg
ccgaccagcccgagctacagccccacatcaccaaactacacgcccacttccccaagttac
tccccgacctctccctcctattctccaacatcgccctcctactcgccaacctcccccaac
tacaccccaaccagccccaactactcccccacttccccctcttactcccccacctctcct
tcctactcgccctccagtccacgttacaccccgcagtcgcccacctacaccccaagctcc
ccttcatacagccccagctccccctcttactcccccacctcccccaaatacaccccgact
tcaccctcatacagtcccagctccccggagtacactcccacctcccccaaatactccccc
acctcgccaaagtactccccaacgtccccgaagtactcacctacttctcccacctactcc
ccaacaactccaaaatacagccccacttctcccacctactccccaacctcccccacctac
acccccacaagccccaaatactcccctacttctcctacttactccccaacttcccccaag
tactcacctacatctcctacttactcgccaactagtcctaaaggctccacgtacagccca
acttcaccgggatacagccccacctcccccacctacagccctgccatcagccccgacgac
agcgacgaggagaactaa
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