Labrus mixtus (cuckoo wrasse): 132959455
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Entry
132959455 CDS
T10666
Symbol
runx1
Name
(RefSeq) runt-related transcription factor 1 isoform X1
KO
K08367
runt-related transcription factor 1
Organism
lmix Labrus mixtus (cuckoo wrasse)
Pathway
lmix04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
lmix00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
132959455 (runx1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lmix03000
]
132959455 (runx1)
Transcription factors [BR:
lmix03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
Runt
132959455 (runx1)
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Runt
RunxI
CD52
Motif
Other DBs
NCBI-GeneID:
132959455
NCBI-ProteinID:
XP_060888440
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Position
24:9761715..9801761
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AA seq
503 aa
AA seq
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MNPGAFSSSGPLSWAMYLMRKGRTGSGLFDPAPGRRYTPPSTTLASGGKMAEALPLGAQE
AGGGAALVSKLRMADRGMVEVISDHPGELMKTDSPNFLCSVLPTHWRCNKTLPIAFKVVA
LGDIPDGTLVTVMAGNDENYSAELRNATAAIKNQVARFNDLRFVGRSGRGKSFTLTITVF
TNPPQVATYQRAIKITVDGPREPRRHRQKMDEVKPGTLAFSERLTELEHLRRNSMRVTPP
HHHHHQPSANTRQSAALNSATFSSPTHTQITADSRQMQSSPSWSYDQSYPYLGQITTPTV
HTANPLSPGRSSLSDLSSRLTGPDLTAFGDPRMTLERPFSSLPSLPDSRFSDPRVHYPPT
AAAFTYAPSHNPVSNGALGITMATAMATTPAGRYHTYLPPPYPANTPHQAQNGHFQSTSS
PYHLYYSTAAGSYQFSMMAGGGGSGDSRSPPRILPPCTNASTGTSLLHPSLPNQNEGVGV
EVESSHSTSPTNMVAAEAVWRPY
NT seq
1512 nt
NT seq
+upstream
nt +downstream
nt
atgaatccgggggcgttctccagctctggccccctgtcctgggccatgtacctgatgaga
aaaggtcggacaggaagcggactctttgacccagcccccggccggcgttacaccccccca
tccactaccctcgcctcgggggggaagatggctgaggccctgccgctgggcgcccaggag
gccggaggcggggccgctctggtgagcaaactgcgaatggccgaccgcggcatggtggag
gtgatctcagatcatccaggtgagctgatgaagacagacagtcctaacttcctgtgctcg
gtgctgcccacacactggaggtgtaacaagaccctgcccatcgcatttaaggtggttgcc
ttgggcgacatcccagacgggaccctggtgacggtaatggcggggaacgatgaaaactac
tcagctgagcttcggaacgccacggccgcaatcaagaaccaagtggccagattcaacgac
ctgcgctttgtcggccgcagtggaagagggaagagtttcaccctgaccatcacggtgttc
accaaccctcctcaagtggccacataccagagagccattaagataacggtggacggtccc
agagagccacgacgccaccgtcaaaagatggacgaggtcaaacccggcaccctggcgttc
tcagagaggctaacagagctggagcacctgaggaggaactccatgagggtgacgccacct
caccaccatcaccaccaaccctccgccaacactcgccaatctgcggcgcttaactccgcc
accttctccagcccgacgcacactcagatcactgccgattccagacagatgcagtcgtct
ccgtcttggtcctacgaccaatcatatccataccttggccagattaccacgcccaccgtc
cacacagccaatcccctttcgcctggtcgctcctcgctcagtgacctgtcctcacgactc
acaggtcctgatctcacagcttttggagaccccaggatgaccttagaacgacctttcagc
tccctcccatccttgcctgactcccgcttctccgatcctcgagtccactaccctccgaca
gctgccgccttcacctacgcgccgtctcacaaccctgtctccaacggcgccctcggcatc
actatggcaacggcaatggcaaccactccagcggggaggtaccacacatacctgcctcct
ccctacccggcaaacaccccccaccaggctcagaatggtcacttccagtccacctcttcg
ccgtaccacctgtactactccaccgctgccgggtcgtaccagttttccatgatggcgggg
ggaggaggcagcggtgactcgcgctccccgccaaggatcctgccgccgtgcaccaacgcc
tccaccggcacctctctcctgcacccctctctgcccaatcagaatgaaggagtgggtgtg
gaggtggagtccagccacagtacctcgccgacaaacatggtggcagcagaagctgtctgg
agaccgtactga
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