Labrus mixtus (cuckoo wrasse): 132959470
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Entry
132959470 CDS
T10666
Name
(RefSeq) E3 ubiquitin-protein ligase Midline-1-like isoform X1
KO
K08285
midline 1 [EC:
2.3.2.27
]
Organism
lmix Labrus mixtus (cuckoo wrasse)
Pathway
lmix04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
lmix00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
132959470
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
lmix04121
]
132959470
Enzymes [BR:
lmix01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
132959470
Ubiquitin system [BR:
lmix04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
132959470
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
COS
SPRY
ANCHR-like_BBOX
zf-B_box
fn3
zf-RING_UBOX
RING_XB3-XBAT31
zf-C3HC4_4
zf-C3HC4
PRY
zf-C3HC4_2
Ig_DSCAM-DSCAML_C
zf-C3HC4_3
Pur_ac_phosph_N
zf-RING_2
zf-RING_5
NDNF
Motif
Other DBs
NCBI-GeneID:
132959470
NCBI-ProteinID:
XP_060888478
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All DBs
Position
24:complement(8449515..8513396)
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AA seq
687 aa
AA seq
DB search
METLESELTCPICLELFEDPLLLPCAHSLCFGCAHRILISHCATNEPVQSIGAFQCPTCR
YVISLSPERGLEGLKRNVTLQNIIDRVQRASSSAGLPLPLPAPLSGPNSPSEEGSNRLAL
VPVSAAMSSPGTPPEPIQCQFCEQDPPQDAVKTCVTCEVSYCEECLRATHPNKKPFTGHR
LIEPMPDSHLRGLQCLEHDEEKVNMYCVTDDQLICSLCKLVGRHRDHQVAALSDRYEKLK
QALDSNLTNLIKRNNELESLMGKLIQTCQHVEVNASRQEGKLVEECDLLIEIIQQRRQII
GSKIKEGKTQRLRKLAQQITNCKQCIERSSALITQADQTLKETDHARFLQTAKSINERVS
MATASTQVLIPEIHLTDTFDTFALDFAREKKLLENLDYLTAPSAPSIREELCTASYDTIA
VHWTSDDEFTVVSYELQYAIFTGQSNIASLCNSLESWMIVPNIKQNHYTVHGLQSGTKYI
FVVKAINQAGSRSSEPGTLKTNSQPFKLDPKSAHKKLKVSHDNLTVERDETTSKKGHSQE
RFTSQSSYGVVGNVYIDSGRHYWEALIGGSTWYAVGIAYKSAPKHEWIGKNSASWVLCRC
NNSWVVRHNSKELAIEPSPHLRRVGVLLDYDAGYVTFYDAVGSQHLHTFHVSFVQPVCPV
FNVWNKCLTILTGLPIPDHLEGLDPED
NT seq
2064 nt
NT seq
+upstream
nt +downstream
nt
atggaaactctggagtcagagctgacctgcccaatctgcctggagctctttgaagacccg
ctgctgctcccctgcgcccacagcctgtgcttcggctgcgcccaccgcatcctcatctcc
cactgcgctaccaacgagcccgttcagagtatcggcgccttccagtgccccacctgcaga
tatgtcatttccttgagtcctgagcgcggactagaaggactaaagagaaacgtgaccctg
cagaacattatcgacagagtccagagggcctcatcttccgccgggctgcctctaccgctg
cccgcgcccctcagcgggcccaactctcccagcgaggaagggagcaacagactggcgctg
gtcccagtcagcgccgccatgtccagcccggggacgccccccgagccgatccagtgccag
ttctgcgagcaggacccgccgcaggatgccgtgaaaacgtgcgtgacgtgcgaggtgtcg
tactgcgaggagtgcctccgggcgacgcaccccaacaagaagccgttcacgggccaccgg
ctcatcgagcccatgccggactcccacctcagggggctccagtgtctggagcacgacgag
gagaaggtgaacatgtactgtgtcaccgacgaccagctcatctgctcactgtgcaagctg
gtcgggaggcacagggaccaccaggtggcagcactgagcgaccgctatgaaaaactcaag
caagccctggactccaacctgaccaacttgatcaagaggaacaatgagctggagtcactc
atggggaaactaatacagacatgtcaacatgtagaggtgaacgcatcccgccaggagggc
aagctcgtcgaggagtgtgatctcctgattgaaatcattcagcagaggaggcagatcatt
ggcagcaagatcaaagaggggaagacacaaaggctgcggaagctcgcccagcagatcacc
aactgcaagcagtgcatcgagaggtcctccgccctcatcacacaggccgaccagacgctg
aaagaaaccgatcacgctcgcttcctacagactgccaagagcatcaacgagagggtctcc
atggcaactgcatcgacccaagtactgatccctgagatacacctgacggacaccttcgac
acttttgctttggactttgccagagagaagaagttgctggagaatctggattatctcact
gctccgagtgctccgagcataagggaggagctgtgcacggcttcctacgacaccatcgcc
gtgcactggacgtctgatgatgaattcacagtggtgagctacgagctgcagtacgccatc
ttcactggacagtccaacattgccagtctgtgcaactcactggagagctggatgattgtt
ccgaacatcaagcagaaccactacacagtgcacggtctgcagagcggcaccaagtatatc
tttgttgtcaaggccattaaccaagcggggagcaggagcagcgaaccggggactctgaag
accaacagccagccgttcaagctggaccccaaatcggcccacaagaagctcaaagtgtcc
cacgataacctgacagtggaacgggatgaaaccacgtcaaagaaaggccacagccaggag
cgcttcaccagccagagcagctacggcgtggtggggaacgtctacatcgacagcggtcgt
cactactgggaggctctgattggagggagcacatggtacgctgtgggcatagcctacaaa
tcggcccctaagcatgagtggatcggcaagaactcggcctcctgggtcctctgccgctgc
aacaactcctgggtcgtccgccacaacagcaaggagctggccatcgagccgtctccccac
ctgcggcgcgtcggcgtcctgttggactacgacgccggctacgtgaccttctacgacgcc
gtgggctcccagcacctccacacgtttcacgtctccttcgtgcagcccgtgtgtcccgtg
ttcaacgtgtggaacaagtgtctgaccatactcactggtttacccatccctgatcactta
gagggactggatcccgaagactga
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