Labrus mixtus (cuckoo wrasse): 132959663
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Entry
132959663 CDS
T10666
Symbol
sox1b
Name
(RefSeq) transcription factor Sox-1b
KO
K09267
transcription factor SOX1/3/14/21 (SOX group B)
Organism
lmix Labrus mixtus (cuckoo wrasse)
Brite
KEGG Orthology (KO) [BR:
lmix00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lmix03000
]
132959663 (sox1b)
Transcription factors [BR:
lmix03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
132959663 (sox1b)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HMG_box
SOXp
HMG_box_2
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
132959663
NCBI-ProteinID:
XP_060888826
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All DBs
Position
24:complement(11479631..11481712)
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AA seq
352 aa
AA seq
DB search
MYSIMMETDLHSPVVPQTNPANPGGHTGGGGGGGGGGGKVPQDRIKRPMNAFMVWSRGQR
RKMAQENPKMHNSEISKRLGAEWKVMTEAEKRPFIDEAKRLRAMHMKEHPDYKYRPRRKT
KTLLKKDKYSLAGGLLGSTGMGGGQRLDSPGGVHAGANSGYATHVNGWANGTYSGQVAAA
AAAAHAMMQEAQLAYTQHPGSGAHPHHPHAHHHPHHHPHNPQPVHRYDMSALSYSPISNS
QSYMSASPPGYGGITGYTHQHQSSGVSPVSGALGGTLGSLVKSEPSVSPPVSAARGPPCP
AGDLRDMISMYLPTGEVAGDSSVHSRLHVLHPQHYASSGSAPVNGTVPLTHI
NT seq
1059 nt
NT seq
+upstream
nt +downstream
nt
atgtacagcatcatgatggagacggacttgcattcccccgtggtgccccagaccaacccg
gccaacccgggggggcacacgggaggaggaggaggaggaggaggcggcgggggtaaagtc
ccccaggacagaatcaagagacccatgaacgccttcatggtgtggtcccggggccagcgg
aggaagatggcgcaggagaaccccaaaatgcacaactcggagatcagcaagcggctgggc
gcggagtggaaggtgatgacggaggccgagaagaggccgttcatcgacgaggcgaagcgg
ctccgggccatgcacatgaaggagcacccggactacaagtaccggccgcggaggaagacc
aagacgctcctcaagaaggacaagtactctctggccggggggctcctcggctccacgggg
atgggtggagggcagcggctggacagcccaggaggagtgcacgcgggggcaaactccggc
tacgccacgcacgtgaacggctgggcgaacggcacgtactcggggcaggtggctgcggcg
gcggcggcggctcacgccatgatgcaggaggcgcagctggcgtacacgcaacacccgggc
tccggagctcacccgcaccacccgcacgcccaccaccaccctcaccaccacccgcacaac
ccgcagcccgtgcacaggtacgacatgagcgccttatcgtacagccccatctcaaactct
cagagctacatgagcgcgtccccgccgggctacggaggcatcaccggctacacccaccag
caccagagctccggggtgtctccggtgtccggggccctcggggggactttgggctccctc
gtgaagtctgagccgagcgtgagccccccggtgtctgcagcgcgcggcccgccgtgccca
gcgggggacctgcgggacatgatcagcatgtacctgccgaccggagaggtggcgggggac
tcgagcgttcacagcagactgcacgtgctccacccgcagcactacgcgagcagcggctca
gctccggtaaacgggacggtccccctcactcatatttaa
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