Labrus mixtus (cuckoo wrasse): 132959860
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Entry
132959860 CDS
T10666
Symbol
vps16
Name
(RefSeq) vacuolar protein sorting-associated protein 16 homolog isoform X1
KO
K20180
vacuolar protein sorting-associated protein 16
Organism
lmix Labrus mixtus (cuckoo wrasse)
Pathway
lmix04140
Autophagy - animal
lmix04148
Efferocytosis
lmix05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
lmix00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
132959860 (vps16)
04148 Efferocytosis
132959860 (vps16)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
132959860 (vps16)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lmix04131
]
132959860 (vps16)
Membrane trafficking [BR:
lmix04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
132959860 (vps16)
Hops complex
132959860 (vps16)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps16_N
Vps16_C
Motif
Other DBs
NCBI-GeneID:
132959860
NCBI-ProteinID:
XP_060889088
LinkDB
All DBs
Position
24:14021606..14033083
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AA seq
834 aa
AA seq
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MAFITANWNPLGEAFYRKTELYEMCWNLKDGLGDSLVAAAPYGGPIALLREPHRRSPSSR
PQLEMYSASGVSVASFVWKSGPVVHLGWTVSDELLCVQEDGSVLIYDLFGSFKRHFNMGL
EVVQSQVLEAKVFHSPYGTGIAIVTGSSRFTLATNIDDLKLRRLPEVPGLQGKPSSWVVL
SQDRQTKVLLSIGPELFILDNTACSAVVPPGLSPQAGSIIQMCVSFSYKYLALFTDTGHL
WTGSSHLQDKLSEVDTKKSTPPKQMVWCRRPRSQQPSVVLMWDRLLLVAGICQDTIQFPV
EDQCVLVGELDGVRIISSTNQELLQEVPVVCQDIFKIASMAPGALLLEAHREYEKSSQKA
DEYLREIKEQSMLGEAVRQCVEAAGHEYDSNTQKSLLRAASFGKCFLTDFSPDLFVSTCR
ELRVLNAVRESDVGLPLTHTQFKQLTLQVLIDRLVYRQFYPLAIEICRYLKIPDYQGVSR
VLKHWASCKVQQKDLSDDAIARAVCVKVGDSPGVSYSHIAAKAYDCGRTELAIKLLDFEA
RSGEQVPLLLKMKRSQLALSKAVESGDTDLVYTVVTYLKNEMNRGDFFMTLRNQPVALSL
YRQFCKLQEQDTLKDLYNQDDDHQELANYYVTASYREKRLDSRLSVLQSAVDEYNKAKNE
FSAKATEEEMRLLRFQRKLDDEKGAGLLGLSLQATMEALLASGLNKQAEQLYRDFRVPDK
RYWWLKLKSLAEKEEWEELEKFSKSKKSPIGYLAFVEVCMKSNNKSEAKKYVSKVTPEQK
VKAHLAISDLEGAAEAAIERKNDSEMGAVLSRCSSSDRLLIDRLNRARISLAKK
NT seq
2505 nt
NT seq
+upstream
nt +downstream
nt
atggcgttcattaccgctaactggaacccgctgggagaagccttttatcgtaaaacagag
ctgtatgaaatgtgctggaacctgaaggatggacttggagacagtttggtggctgcagcg
ccgtatggaggaccgatagctctcctcagagaacctcacagacgttctccgagttctcgt
cctcagttagagatgtattctgcatctggcgtctccgtggcgagctttgtgtggaagagt
ggtcctgtggttcacctcggctggacggtcagtgacgagctgttgtgtgttcaggaggac
gggtcggttctgatctacgacctgttcgggtccttcaagagacacttcaacatgggcctg
gaagtggtccagagtcaggtgttggaagccaaagtgttccactctccttatggaacaggt
atcgccatagtgacaggatcttcacgtttcaccttggcgaccaacattgatgacctgaag
cttcgcaggttaccagaagtcccaggtctgcaggggaaaccgtccagttgggtcgtcctc
tctcaggacagacagactaaagtcctgctgtccatcggacctgaactcttcatcttggac
aacacagcatgcagtgctgtggtccctccgggtctcagtcctcaggctggcagtattatc
cagatgtgcgtgtctttcagctataaatacctggctctcttcactgacactggacatctg
tggacaggctcttcccacctccaggacaaactgagtgaagtggacaccaaaaagtcaaca
ccgcccaaacagatggtgtggtgtcgcagaccaaggagtcagcagccgtctgtggttctg
atgtgggacagactgctcctggtggcaggaatctgccaggacacaatccagttccctgtg
gaggaccagtgtgttcttgttggagaactagacggagtccgaatcatcagctccaccaat
caggagcttctacaggaggttcctgtggtctgtcaagatatctttaaaattgcttcaatg
gctcctggagctctgctgctggaggcccacagagagtacgagaagtcaagtcagaaggca
gatgagtacctgagggagatcaaggagcaaagcatgctgggagaagcagtgagacagtgt
gtggaagcagcaggacatgagtatgactccaacacccagaagtccctgctgagggcagcg
tccttcgggaagtgtttcctgacggacttttctcccgatcttttcgtctcaacttgcaga
gaactgcgagttctgaacgctgtcagagaaagcgatgtggggctgccgctcacacacact
caattcaaacagttgactctacaggtgctgatcgacaggctggtgtacagacagttttat
ccgttggcgatagagatctgtcgttacctgaagattcccgactatcagggtgtcagcaga
gtgctcaaacactgggcttcatgtaaggtgcagcagaaggacctatcagatgatgccata
gcccgagctgtgtgtgtgaaagtgggggactcaccgggggtttcttattcgcacatcgcc
gccaaagcgtacgactgtggacgcacagagctggccatcaagctgttagacttcgaggcg
cgctcaggtgaacaggttcctctgctgctgaagatgaagaggagtcagttggctctcagt
aaagctgtggagagtggagacactgacctggtttacacagtggtgacttacctgaagaac
gaaatgaacagaggagatttcttcatgaccctgaggaaccaaccggtcgctctcagcctc
tacagacagttctgtaaactgcaggaacaggacactctgaaggatctttataatcaggat
gatgatcatcaggaactcgctaactactacgttactgccagttacagagagaagaggtta
gacagccgtctgtctgtcctgcagtctgctgtcgatgaatacaataaggcgaagaacgag
ttctctgcaaaggccacagaagaggagatgcgcctccttcgtttccagcgaaagctagac
gatgagaaaggggcggggcttttaggactgtctctacaggccaccatggaggctctgctg
gcttcaggactcaacaaacaagcagaacaactttacagagacttcagagtacctgacaaa
aggtattggtggttaaaactgaagtccctggcagagaaggaggagtgggaggagttagaa
aagttctcaaagagcaaaaagagtcctattggttacctggcctttgttgaagtctgcatg
aagagtaacaacaagagcgaggctaagaagtatgtttccaaggtgacacctgagcagaag
gtcaaagctcacctggccatcagtgacctcgaaggggcggcagaggctgcaatcgagcgc
aagaatgactcagagatgggggcggtgctctccagatgctcctcctcagaccgcctgttg
attgacaggttgaaccgtgccagaatctccctcgccaaaaagtga
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