Labrus mixtus (cuckoo wrasse): 132960253
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Entry
132960253 CDS
T10666
Symbol
rxrgb
Name
(RefSeq) retinoic acid receptor RXR-gamma-B
KO
K08526
retinoid X receptor gamma
Organism
lmix Labrus mixtus (cuckoo wrasse)
Pathway
lmix03320
PPAR signaling pathway
lmix04920
Adipocytokine signaling pathway
Brite
KEGG Orthology (KO) [BR:
lmix00001
]
09150 Organismal Systems
09152 Endocrine system
04920 Adipocytokine signaling pathway
132960253 (rxrgb)
03320 PPAR signaling pathway
132960253 (rxrgb)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lmix03000
]
132960253 (rxrgb)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
lmix03310
]
132960253 (rxrgb)
Transcription factors [BR:
lmix03000
]
Eukaryotic type
Zinc finger
Cys4 hepatocyte nuclear factor 4-like
132960253 (rxrgb)
Nuclear receptors [BR:
lmix03310
]
2. Hepatocyte nuclear factor 4 like
2B. Retinoid X receptor (RXR)
132960253 (rxrgb)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Nuc_recep-AF1
Hormone_recep
zf-C4
tRNA_bind_3
Motif
Other DBs
NCBI-GeneID:
132960253
NCBI-ProteinID:
XP_060889155
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All DBs
Position
3:complement(15214215..15241676)
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AA seq
464 aa
AA seq
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MWHPVASPATGGSPGREIGYGHYSTGPMSTAHNHPPHMGGMVGHPSVISTSRPLPSPMST
LGSPMNGLASPYPVITSSLGSPAVSLPSTPSMNFGLNSPQMNSMNSVSSSEDIKPPPGLQ
NLGNLNYQCTSPGGMSKHICSICGDRSSGKHYGVYSCEGCKGFFKRTVRKDLTYTCRDMK
ECLIDKRQRNRCQYCRYQKCLAMGMKREAVQEERQRGKERGENEVESTSSFNEEMPVDKI
LDAEVAVEPKTEAYSEGSPSNSTNDPVTNICQAADKQLFTLVEWAKRIPHFSELPLDDQV
ILLRAGWNELLIASFSHRSVTVKDGILLATGLHVHRSSAHSAGVGSIFDRVLTELVSKMK
DMQMDKTELGCLRAIVLFNPDAKGLSNPPEVEGLREKVYASLESYTKQKYPDQPGRFAKL
LLRLPALRSIGLKCLEHLFFFKLIGDTPIDTFLMEMLEAPHQIT
NT seq
1395 nt
NT seq
+upstream
nt +downstream
nt
atgtggcatcccgtggcatcacctgcaactggaggcagccctgggcgggagataggttat
ggccactactctacaggtccaatgagcacagcccacaaccacccgcctcacatgggtggc
atggtgggccacccgtccgtcatcagcacctccagacccttaccgtccccaatgtccacc
ttgggctcgccgatgaacggcctggcgtcaccttaccccgtcatcacatcttccctgggc
tcacctgctgtatctctgccgtccacacccagtatgaacttcggactcaacagtccacag
atgaattccatgaacagtgtcagcagctcagaggacatcaagcctccaccgggcctacag
aacctgggaaacctcaactaccagtgtacgagccccgggggaatgtcaaagcacatctgc
tccatttgtggggaccgctcctcaggaaagcactatggtgtgtacagctgcgagggatgc
aaaggcttcttcaaaaggaccgttcgtaaagatcttacctacacgtgtcgagacatgaag
gagtgcctgattgacaagcggcagcgaaaccgctgccaatactgtcgctaccagaagtgc
ctggccatgggcatgaagagagaagcggtgcaggaagagaggcagcgtgggaaggagcgg
ggtgagaatgaggtggaatccaccagcagtttcaatgaagaaatgcctgtggacaagatc
ctggatgcagaggtggcagtggagcccaaaacagaggcgtacagtgaaggcagccccagc
aactcaaccaacgaccctgtaactaatatctgtcaagcagcagacaagcagctcttcact
ttagtggagtgggccaaaaggatccctcacttctccgaactccccctggatgaccaggtc
atcctactacgagcaggctggaacgagcttctaattgcttcattttcacatcgttcagtc
acagtaaaagatggcatcctgttggcaacgggcctccacgtgcacagaagcagcgcccac
agtgccggagtgggctccatctttgatagagtcctgacagagctggtatccaaaatgaaa
gacatgcagatggataagacggagctcggttgtctgcgagccatcgtcctcttcaaccca
gatgcaaaaggtctttcaaacccaccagaagttgaagggttgagggaaaaagtttacgct
tctttggaatcatacacgaaacagaaatacccagaccagcctggcaggtttgccaagctg
ctgctgcgactgcctgccctgcgctccatcggactcaagtgtctggagcatctgtttttt
ttcaagctgattggagacacacccatcgacaccttcctgatggagatgctagaggcgcca
catcagatcacatga
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