Labrus mixtus (cuckoo wrasse): 132967142
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Entry
132967142 CDS
T10666
Name
(RefSeq) regulator of nonsense transcripts 1-like
KO
K14326
regulator of nonsense transcripts 1 [EC:
5.6.2.5
5.6.2.3
]
Organism
lmix Labrus mixtus (cuckoo wrasse)
Pathway
lmix03013
Nucleocytoplasmic transport
lmix03015
mRNA surveillance pathway
Brite
Enzymes [BR:
lmix01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
132967142
5.6.2.5 RNA 5'-3' helicase
132967142
Messenger RNA biogenesis [BR:
lmix03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
132967142
mRNA cycle factors
Common to processing body (P body) and stress granule
132967142
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Gene cluster
GFIT
Other DBs
NCBI-GeneID:
132967142
NCBI-ProteinID:
XP_060889979
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Position
3:23978884..23995179
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AA seq
1102 aa
AA seq
DB search
MSVEAYGPSSQTLTFLDTEEAELLGADTQGSEYDFTDFTLPSQTQTQGHTQSQLDSQVNG
PDEGLLNGGLDDSVSKASQLLAELNFEEDEEDTYYTKDLPVHACSYCGIHDPACVVYCNT
SKKWFCNGRGNTSGSHIVNHLVRAKCKEVTLHKDGPLGETVLECYNCGCRNVFLLGFIPA
KADSVVVLLCRQPCASQSSLKDINWDSSQWQPLIQDRCFLSWLVKIPSEQEQLRSRQITA
QQINKLEELWKDNPSATLEDLEKPGVDEEPQHVLLRYEDAYQYQNIFGPLVKLEADYDKK
LKESQTQDNITVRWDLGLNKKRIAYFTLPKTDSGDMRLMQGDEICLRYKGDLAPLWKGIG
HVIKVPDNYGDEIAIELRSSVGAPVEIPHNFQVDFVWKSTSFDRMQSALKTFAVDETSVS
GYIYHKLLGHEVEDVTIKCQLPKRFTAQGLPDLNHSQVYAVKTVLQRPLSLIQGPPGTGK
TVTSATIVYHLSRQGNGPVLVCAPSNIAVDQLTEKIDKTGLKVVRLCAKSREAIESPVSF
LALHNQISNMDSMPELQKLQQLKDETGELSSADEKRYRALKRTAERELLMNADVICCTCV
GAGDPRLAKMQFRSILIDESTQATEPECMVPVVLGAKQLILVGDHCQLGPVVMCKKAAKA
GLSQSLFERLVVLGIRPIRLQVQYRMHPALSAFPSNIFYEGSLQNGVTAADRIKKGFDFQ
WPQPDKPMFFYVTQGQEEIASSGTSYLNRTEAANVEKITTRLLKAGAKPDQIGIITPYEG
QRSYLVQYMQFSGSLHTKLYQQVEIASVDAFQGREKDFIILSCVRANEHQGIGFLNDPRR
LNVALTRAKYGVIIVGNPKALSKQPLWNNLLNNYKEQKVLVEGPLNNLRESLMQFSKPRK
LVNTINPGGRFMSTAMYDAREALIPGSAYDRSNTAGRPSNMYFQTHDQIGMIGAGPGHMA
AMNIPIPFNLVMPPMPPPSYLGQTNGPATGRGAMKGKPGRGGRQRLRGPGNQGGSHGNGP
NSQASQDGASQSFSQGPLTQGYISMSQPSQMSQPGLSQPELSQDSYLGDEFKSQIDVALS
QDSTYQGERAYQHGGVTGLSQY
NT seq
3309 nt
NT seq
+upstream
nt +downstream
nt
atgagtgtggaggcgtacgggccgagctcccaaaccctcaccttcctggacaccgaggaa
gcagagttactcggagcagacacccagggctccgagtacgacttcaccgactttacgctt
ccaagccagacgcaaactcaaggccacacacagagccagctggacagtcaggttaatggt
cctgatgaaggtcttttaaatggtggtctggatgactctgtgtccaaagccagccagctg
ttggccgagctcaactttgaggaagatgaagaagacacgtactacaccaaagacctgcct
gtgcacgcgtgcagctactgtgggatccacgatccagcatgtgttgtgtactgcaacacc
agcaagaagtggttctgtaatggacgtggcaacacatctggcagtcacattgtgaaccat
ttggtgagagcaaaatgcaaagaggtgacgctgcataaagatgggccactgggcgagaca
gtgctggagtgttacaactgtggctgccgcaacgtgttcctcctgggcttcatcccagcc
aaggccgattctgtggtggtgctactttgcaggcagccctgtgctagccagagcagcttg
aaagacatcaattgggacagctcacagtggcaaccactgatccaggatcgctgctttcta
tcctggctggtgaagatcccttcggagcaggagcaacttcggtcccgtcagattactgcc
cagcagatcaacaagctggaggagctgtggaaggacaacccaagtgccaccttggaagac
ctggagaaaccgggagtggacgaggagccccagcatgtgctgctgcgctatgaggacgcg
taccagtatcaaaatatctttggccctctggtcaaacttgaggctgactatgacaagaag
ctaaaggagtctcagacccaagacaatataactgtcaggtgggacctgggtctgaataaa
aagcggattgcctatttcacactgcccaagacggattcaggtgatatgaggctcatgcag
ggtgacgagatctgcttgcggtacaagggagacctggccccgctgtggaaaggaatcggc
catgtcatcaaagttcctgacaactatggggatgaaattgccattgagttgcggagcagt
gttggagcgcctgttgaaatcccccacaacttccaggtggactttgtgtggaagtccact
tcctttgataggatgcagagcgccctcaagacatttgcagtggatgagacatctgtgtct
ggatacatttaccacaaactgctcggacacgaggtagaggatgtcaccatcaagtgccag
cttccaaagcgcttcactgcccagggcctgccagacctcaatcactcacaggtgtacgct
gtgaagacggtgctgcagaggcctctcagtctaatccagggtcctccaggcactgggaag
accgtcacctctgccactatcgtataccacctgtcccggcaaggcaacggaccagttctg
gtgtgtgctcccagtaacattgctgtggatcagctgactgagaagattgacaagactgga
ctgaaggttgttaggctgtgtgcaaagagcagggaggccattgagtctccagtgtccttc
ctggctctgcacaaccagatcagcaacatggacagcatgccagagcttcagaaactccag
cagctgaaggatgagactggtgagctgtcgtctgctgatgagaaacgctacagagctctg
aaacgtacagcagagagggagctgctcatgaatgctgatgttatctgttgtacctgtgtc
ggggctggtgacccacgtctggccaagatgcagttccgctcaatcctgattgacgagagt
acccaggccacagagccagagtgtatggtgcctgtggtgcttggagctaagcagctcatt
ctggtgggcgatcactgtcagctgggtccagtggtgatgtgtaagaaggcagccaaagca
ggtctttcccagtccctgtttgaacgcctggtggtcctggggatccgtccgattcgcctg
caggttcagtaccgcatgcacccagcactcagtgccttcccatccaacatcttctacgag
ggctccctgcagaacggtgtaactgcagctgaccgcatcaagaaaggctttgacttccag
tggccgcagccagataagcccatgttcttctatgtcactcaaggccaggaggagattgcc
agctctggaacatcctaccttaacaggactgaggctgccaacgtggagaagatcaccacc
aggctgctgaaggctggagctaaacctgaccagatcggcatcatcaccccgtacgagggt
cagcgctcctacctggtccagtacatgcagttcagcggctccctgcacaccaaactctat
cagcaagtggaaattgccagcgtggacgctttccagggtagggagaaggatttcatcatc
ctgtcctgtgtccgagctaacgagcaccagggcatcggcttcttgaatgacccgcgtcgt
ctcaacgtggcgctgaccagagccaagtatggtgtgatcattgtggggaaccccaaagcc
ctctccaagcagcctttgtggaacaacctgctcaacaactacaaagagcagaaagtcctg
gtggagggacccctcaacaatctgagggagagcctcatgcagttcagcaagcctcgcaag
ctggtcaacaccatcaaccctgggggacgttttatgagcactgcgatgtacgacgcccgt
gaggccctcatccctggctcagcctacgaccgcagcaatactgccggccggccatccaac
atgtactttcaaactcatgaccagattggaatgataggggcaggccccggtcacatggcc
gccatgaatattccaatacccttcaacctggtgatgccacccatgcctcctcccagttac
ctgggtcagaccaatggccctgcaacaggtcgtggagctatgaagggtaaacctgggcgt
ggagggcggcagaggctccgaggcccggggaaccagggtggcagtcatggtaacggacca
aacagtcaggcaagccaggatggggcctcccagtccttctcccaggggccgctgacacag
ggctacatctccatgagccagccctctcagatgagccagcctggactatcccaaccagag
ctgtcccaggacagctacctgggcgatgagttcaagtcccaaatcgacgtggctttgtcc
caggactcgacttaccagggtgaacgtgcataccaacatggtggggtgactggactgtca
cagtattag
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