Labrus mixtus (cuckoo wrasse): 132970600
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Entry
132970600 CDS
T10666
Name
(RefSeq) chaperonin GroEL 1-like
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
lmix Labrus mixtus (cuckoo wrasse)
Pathway
lmix03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lmix00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
132970600
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lmix03019
]
132970600
03110 Chaperones and folding catalysts [BR:
lmix03110
]
132970600
03029 Mitochondrial biogenesis [BR:
lmix03029
]
132970600
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
lmix04147
]
132970600
Enzymes [BR:
lmix01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
132970600
Messenger RNA biogenesis [BR:
lmix03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
132970600
Chaperones and folding catalysts [BR:
lmix03110
]
Heat shock proteins
HSP60 / Chaperonin
132970600
Mitochondrial biogenesis [BR:
lmix03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
132970600
Exosome [BR:
lmix04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
132970600
Exosomal proteins of other body fluids (saliva and urine)
132970600
Exosomal proteins of breast cancer cells
132970600
Exosomal proteins of colorectal cancer cells
132970600
Exosomal proteins of bladder cancer cells
132970600
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
DUF3348
DUF883
Motif
Other DBs
NCBI-GeneID:
132970600
NCBI-ProteinID:
XP_060890443
LinkDB
All DBs
Position
Unknown
AA seq
541 aa
AA seq
DB search
MVEKKIVTLGNEARQAIAEGARLLAQIVSVTLGPKGRTVMLGRGQSVVTTKDGVSVAKEI
VLKDPLQNVGAQLLKEVASQTADLAGDGTTTAVVLGNEILRLGMKAVVSGADISSLKSGL
ELATEHVCRAVREMGVQVKTSERIAQVATISANNDPVIGAIIANAIQEVGREGVISIGES
KSLETKLEVVKGMQFSKGYISPYFVTDLEKSVCEFSDAFLLLVEKKISGVSGLVKFLERF
SEDKGGRPLLIIAEDIESEAIAMLVLNKMKGGMLVCAVKAPDFGDRRKQKLEDLSILTGA
QLISSESGLSLEEADLSVLGRAGKIRVSKEDTIVVDGLGDKARVEERCEHIRFALSKSDS
SHEREVLAERLSKLQDGVAVIYVGAATEAEARERKDRIEDALHATRAAIADGIVPGGGVA
LLRSVPVLKKLEKDVSPEVAVGVRIIRQACFAPATQIASNCGENGSLIAGKISEHVEPNW
GYNGLTNTFGDLLELAVVDPVAVVVIALSKAVSVASLMLTSGCVVTESAESEEEEMAETA
Y
NT seq
1626 nt
NT seq
+upstream
nt +downstream
nt
atggtagaaaaaaagatcgttacgcttggcaacgaggcgcgtcaagcaattgctgaaggc
gctcgattattggcacaaattgtttcggtgacgttggggccaaagggtagaacggttatg
cttggtcgaggccaatctgttgtaacaaccaaagatggtgtttctgtagcaaaagagatc
gttttgaaagatcctttgcaaaatgttggagctcaattgttgaaggaggttgcttctcaa
acagccgacttggctggtgatggtacaacaactgctgtcgttttaggtaatgagatttta
cgtcttggaatgaaggcggttgtttctggtgcagatatttcttctttgaagagcggcctt
gagttggcaacagagcatgtttgccgtgctgttcgtgagatgggtgtccaagttaaaacg
agtgaaagaattgcacaagtagcaactatttcagcgaacaatgaccctgttattggcgct
atcattgccaatgctattcaagaagttggtagagagggtgtaatttctattggagagagt
aaatctcttgaaacgaaattggaagtcgttaaaggaatgcaattttccaagggatacatt
tctccttattttgtgactgacttggaaaaatcggtttgtgagttttcggacgcttttctt
cttcttgtggagaaaaaaatttctggagtgtctggcttagttaaatttttggagcgtttt
tctgaagacaagggaggacgacctcttctcataatagctgaagatatcgaatcagaagct
atagcaatgttagtcctgaacaagatgaaaggaggcatgcttgtttgtgcagtgaaggca
cctgattttggagatcgcagaaaacagaaattggaagatctgtcaattttgacaggagca
caacttatttcttctgaatctggactttctcttgaggaggctgacttatctgtcttaggt
agagctggcaagattcgtgtttcaaaagaagatacaattgtagtcgatggcctaggagat
aaggctagagttgaagagagatgcgaacatattcgttttgctctttcaaagtcagattct
tctcatgagcgtgaagttttggctgagcgtttatcgaaattacaagacggtgttgctgtc
atctatgttggtgcggcaactgaagctgaggctcgtgaaagaaaggatcgcattgaggat
gctttgcatgcaacacgtgcggcgattgccgatggaatcgttcctggtggtggtgtggct
cttttgcgttctgttcctgtgctcaaaaaattggagaaagatgtttctccagaagttgct
gttggtgtgcgtatcattcgtcaggcttgctttgctcctgcaacacaaattgcatctaat
tgtggggagaatggatctttgattgctggaaagatttctgagcatgttgaaccaaattgg
ggatacaacgggttgacgaacacgttcggagacttgcttgagttagctgttgtggatcct
gtagctgttgtagttattgctttgagtaaggccgtttctgtagctagtttgatgctaaca
agtggttgtgtcgtaactgaatcagcagaaagtgaagaagaggagatggctgaaacggcc
tattaa
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