Labrus mixtus (cuckoo wrasse): 132971756
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Entry
132971756 CDS
T10666
Symbol
prpf38a
Name
(RefSeq) pre-mRNA-splicing factor 38A
KO
K12849
pre-mRNA-splicing factor 38A
Organism
lmix Labrus mixtus (cuckoo wrasse)
Pathway
lmix03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
lmix00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
132971756 (prpf38a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
lmix03041
]
132971756 (prpf38a)
Spliceosome [BR:
lmix03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
132971756 (prpf38a)
Complex C
U4/U6.U5 tri-SnRNP related factors
132971756 (prpf38a)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRP38
PRP38_assoc
Allexi_40kDa
Motif
Other DBs
NCBI-GeneID:
132971756
NCBI-ProteinID:
XP_060890580
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Position
3:complement(32103089..32109777)
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AA seq
309 aa
AA seq
DB search
MANRTVKDANSIHGTNPQYLVEKIIRTRIYESKYWKEECFGLTAELVVDKAMELKYVGGV
YGGNIKPAPFLCLSLKMLQIQPEKDIIVEFIKNEDFKYVRLLGAMYMRLTGTAVDCYKYL
EPLYNDYRKIKTQNRNGEFELMHVDEFVDELLHAERMCDIILPRLQKRHVLEEAEMLDTR
ISALEEDLDEVETSEEEDEEEEKPERLQTPEPHRRSYRDNDRPRRSPSPRYRRSRSPRRR
SRSPKRRSPSPRRDRHRSKSPRRHRSRSRERRHRSKSPGHNRSRRHRSHSKSPERSSKKS
HKKSRRGNE
NT seq
930 nt
NT seq
+upstream
nt +downstream
nt
atggcgaacagaaccgttaaagatgcgaacagcatacacgggaccaacccgcagtatctg
gtggagaaaatcatccgaactcggatctatgaatctaaatactggaaggaggagtgcttc
ggtttgaccgctgagctggtggtcgacaaagccatggagctgaagtacgtgggtggagtt
tacggtggaaacatcaagcccgctcctttcctctgtctctccctgaagatgctgcagatt
caaccagaaaaagacatcatcgtcgagttcatcaaaaatgaggatttcaaatatgttcgt
ttacttggagcgatgtacatgaggttaacgggcactgcagtggactgctacaaatacctg
gagccgctgtacaacgactacaggaaaatcaagactcagaacagaaacggagagtttgag
ttgatgcacgtggatgagttcgtcgacgagctgcttcatgcagagaggatgtgtgacatc
attctgcccaggcttcagaagagacacgtcctggaggaggccgagatgttagacactcgg
atcagcgctctggaagaggatctggatgaagtggagaccagtgaggaagaagacgaggaa
gaggagaagccggagagactccagacccccgaacctcacagacgcagttatcgagacaac
gacagaccccgtcgctctccatcccctcgttacagacgcagccgctcacccagacggagg
agcagatctccaaagaggcgaagcccgtcgccacggagagaccgccatcgcagcaagagc
ccccgccgacatcgcagtcgttccagagaaagacgccaccgctccaaatctccaggtcac
aacagaagccgcagacatcggagtcactcaaagtccccggagaggagctcaaaaaagagt
cacaagaagagtcgaagaggaaacgagtga
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