Labrus mixtus (cuckoo wrasse): 132972346
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Entry
132972346 CDS
T10666
Symbol
fn1b
Name
(RefSeq) fibronectin 1b isoform X1
KO
K05717
fibronectin 1
Organism
lmix Labrus mixtus (cuckoo wrasse)
Pathway
lmix04510
Focal adhesion
lmix04512
ECM-receptor interaction
lmix04518
Integrin signaling
lmix04810
Regulation of actin cytoskeleton
lmix04820
Cytoskeleton in muscle cells
lmix05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
lmix00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
132972346 (fn1b)
04518 Integrin signaling
132972346 (fn1b)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
132972346 (fn1b)
09142 Cell motility
04820 Cytoskeleton in muscle cells
132972346 (fn1b)
04810 Regulation of actin cytoskeleton
132972346 (fn1b)
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
132972346 (fn1b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lmix04131
]
132972346 (fn1b)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
lmix04147
]
132972346 (fn1b)
00536 Glycosaminoglycan binding proteins [BR:
lmix00536
]
132972346 (fn1b)
04990 Domain-containing proteins not elsewhere classified [BR:
lmix04990
]
132972346 (fn1b)
Membrane trafficking [BR:
lmix04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
ER-Golgi intermediate compartment (ERGIC) proteins
132972346 (fn1b)
Exosome [BR:
lmix04147
]
Exosomal proteins
Exosomal proteins of bladder cancer cells
132972346 (fn1b)
Glycosaminoglycan binding proteins [BR:
lmix00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
132972346 (fn1b)
Domain-containing proteins not elsewhere classified [BR:
lmix04990
]
Fibronectin (FN) domain-containing proteins
Fibronectin type I domain-containing proteins
132972346 (fn1b)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
fn3
fn1
FN3_DSCAM-DSCAML_C
Pur_ac_phosph_N
Fn3_PBP1
fn2
Fn3_VIN3
Fn3_Dep-1_3rd
Fn3_Dep-1_2nd
NDNF
Interfer-bind
FN3_Tor_3rd
DUF4998
Ig_RIMBP2
Motif
Other DBs
NCBI-GeneID:
132972346
NCBI-ProteinID:
XP_060891100
LinkDB
All DBs
Position
1:complement(15597447..15619209)
Genome browser
AA seq
2367 aa
AA seq
DB search
MTSSPLTGLLVALCVSSAVHGLPKKSKRQTGQYQVYPELRDASAVSPVGCEENGRSFRLN
EQWEKPYLGSTLLCTCNGAAGIKCKTKPEVEETCFDKYNDRTYRVGETYERPKDGMMWDC
TCIGSGRGKISCTIANRCHEGGRSYKIGDTWQRPHDTADSMLECVCLGNGKGEWTCKPVA
ERCFDNSVASSYMVGETWEKPYQGWMMLDCTCLGEGNGRITCTSRNRCNDKETRRSHRIG
DTWTKTDTSGQILQCQCLGNGRGEWKCERHNAVRTAGTVVVTPQTQQLPEGTCRTESGST
YSDGQRWFRSQGSKHMICTCLGNGVSCQEYEARNQAYGGSSNGQPCTFPFVFMGKTYYSC
TSDGRTDGQLWCSTTSDYEADQQYSFCTEKNVIVATRGGNSNNALCHFPYLYSGRNYTDC
TSDGRRDGMRWCGTSYDYDNEQRFGFCPMAAHEELCTTNDGTMYRVGDKWDKRHDVMGHM
MECTCLGNGRGEWNCVAHSQLRDQCIVEGYTYEVNQEFSKRHDEGYMMNCTCYGQGRGRW
KCDAIDQCQEPQTRTFHQIGEVWDKAIHGVHYRCYCYGNGNGEMRCEPQQTYQDGHRPVQ
VIITEAGKQPDSHPIQWNPPSSAHITQYILKWRIKNNRGPWREVTIPGQHNSYTIGGLRP
GITYEGQLISVLRYGNREVTRFDFTTTHGSLETSEGETTVPPPVMDTSESVTEITSNSFV
VSWTSASATISGFRVEYELSEDGAKPKILDIPRTSNSVTISELLPGRRYNVNVYELPESG
QPNLILTTSQTTAPDSVAQHVVDEVGESSIRISWSRPQAPITGYRVVYTPSVEGSSTELT
LTDSETSVNLVDLHPGVLYNISIYAMKEDQESEPVFVQVNTAGSPLPEEVPAPTDLQFYE
VTDVKITITWTGPPSEVTGYRVTYSPVGPDGTETRPLPLPTSRNAYADITHLHPGTLYRF
YIYAINGGVESEPLVGERSTKPDSPSNLHFTDLGPDSVTATWNAPRAVVTGYRLFLSIGG
SNPIEKRIPGRVTQFPLRNLRPDTQYTATLHSELDNELSEGITTYFATTPRMGNAPPFST
EVTDASIIITWIPVRRFSYKLSVLPSQEGESPKEQTSDSGRIFIPDLIPGTQYTYSVQPI
FNGRNQGQPITRNAFTSLSPPTDLRVQSSPDTGDLIVHWVASTTPGITGYRVTSTPVNGQ
RGNSLDELVRADQTSIRLESLNPGAEYNISVFTNKGHLESVPVSTIVTPVIPAPTNLQFN
GVGPDHIRVTWAVPHVATPSDISRFVIRYHPAATDDDIREVNVGGATNTFVLQNLLPNTE
YRISVVCVYGEQESQPATGTQRTTLDSPTGLDFSDIRTTSFTIHWLAPTAAITGYRVRYQ
GTSGGRAKDERLPPTRTYYTLTGLTPETEYLIYVYAVSNSQESQPLTGTQATISDAPTDL
EVTSSTPTSITIRWDAPSVTVKNYKITYASTGGETQDFTIPGTQTTATITGLNPGTDYSI
GVIAVSGRGDSPPSNTPVYIRHTTDTEPPTDMRLTEVTDNAITVRWTPAQGPITGYRVTS
VPKNGLGPSYSEVVAPDQTEITFTGLMPTVEYVISVYALANDGQPSSPVVDNAITAMDRP
KDLTFSDIDSTSMRITWDSPDGTVTSYRVLYSSPEEAERDLRPAPRGDQDSVLIRGLRPG
TEYTVKVIALHGRTPSKPLVGTQATVIPSPTSLMISDVGPSTFTVSWRAPNAGLSGYRVV
VIPKTINGPTKELNVAPDTTRVVVPGLMVATAYQVHVYALKNSVTSRPLTGEMTTLEDVS
TPRRVRVSDVKDSSFTLSWRSKLETITGYLIEATPVSGSNPIISKNIPAETNTYTLTGLQ
PGTIYSISLYTLNGVTRSPPFTLMIQTAEPVVQAPTSLQFTSLTPTSITFAWQPPATEIT
GYYVTYEESGRGPRELTPRPHAGQNYATISGLKPATEYIIKIVAIQNTQRSTPLVGKVRT
NPDSLLPLPLPRPGGVGDKLDVPEPDLDNTVQVVGTNGQDGHGGQSQHVEYTEYNNNGDN
NNNRYNGNSGNPQYPYGQVREPLVFVPLPDAEGRRLPILKLNFPIGSTFGNDTGVPQEAQ
TQTSISWKPYKQSNAYLVSCHPLTHQHEKMFQVRLPDTATTATLIGLTPGANYNVIVEAV
LGALKHKIVEQVITAGNTIPGGVSSSKDSCYDAFTATHHDVGAEWERMSETGFKLWCRCL
GLGSGHFRCDSSKWCHDNGINYRIGEKWDRRGDNGHLMSCTCLGNGKGEFKCEPHDSVCY
DDGKAYQVGNQWQKEYLGAICTCTCFGGQQGWRCENCRKPGAEVDDSLLRPVRYGDNSLH
KLNIHCPIECLRPDLLADAIAPPNPRE
NT seq
7104 nt
NT seq
+upstream
nt +downstream
nt
atgactagtagcccgctgactgggttgctggttgcgctgtgcgtaagcagcgcggtgcac
gggttgccaaagaagagcaaaagacaaactggccagtatcaggtgtatcctgaactccgc
gatgcatcggccgtttctccagtcggctgtgaggaaaacggtcgctcattcagactgaac
gagcagtgggagaaaccctacctcgggagcacgctgttgtgcacctgcaatggagcagca
ggcatcaagtgtaaaaccaagcctgaagtggaggagacctgttttgataagtacaatgac
cggacgtaccgggtcggggaaacctacgagagaccaaaggacgggatgatgtgggactgc
acctgtatcggttcgggtcgaggaaagatcagctgtaccattgcaaatcgttgccatgaa
ggtggcaggtcttataaaatcggagacacctggcagaggcctcacgacactgctgactcc
atgttggagtgtgtgtgtctcggaaacggcaaaggagagtggacctgcaaacctgtcgcc
gagcgatgctttgacaacagtgttgcatcatcatacatggtgggggagacgtgggagaaa
ccgtaccagggctggatgatgctggactgcacctgtctgggagaaggaaatggacgaatc
acatgcacctcaaggaatcgttgcaatgacaaggaaacccgaaggtcacatcgtatcgga
gacacatggacaaagacagacacaagtggacagatcctgcagtgtcagtgcttagggaac
ggccgtggcgagtggaagtgcgagagacacaatgcagtccgaactgcaggtactgtggtg
gtgaccccacagactcagcagctgccagaagggacttgccgcacagaatctggatcgaca
tacagcgatggacagcgctggttcagaagtcagggcagcaagcacatgatctgtacctgt
ctgggcaacggagtcagctgtcaggagtatgaggccaggaaccaggcgtacggtggcagc
tctaacggccagccctgtaccttcccattcgtcttcatgggaaagacttactactcttgc
acttcagatggacgcacagacgggcagctctggtgctctacaacctcagactacgaggca
gaccagcagtactcgttctgtactgagaagaatgtcattgtggcaacaagaggtggaaac
tccaacaacgctctctgtcacttcccctacctctacagcggacgcaactataccgactgc
acatctgatgggcgccgtgacggaatgaggtggtgcggtaccagctatgactatgacaac
gagcagcgctttggattctgtcccatggctgcccatgaggagttatgcactaccaacgat
ggaacgatgtaccgtgttggcgacaagtgggacaaacgccatgatgtcatgggtcacatg
atggagtgcacatgcctgggaaatggcaggggggagtggaactgtgtcgctcactcacag
ctgcgagatcagtgtatcgttgagggctacacctatgaggtaaaccaggaattctccaag
cgccacgacgagggctacatgatgaactgcacctgctacggacagggacgtggacgctgg
aagtgtgacgctattgatcagtgtcaggagccacaaaccaggacgttccatcagatcgga
gaggtgtgggacaaagccatccatggagtccactatcgctgttactgctacggcaatggg
aacggagaaatgagatgtgaacctcagcaaacctaccaagacggccacagacccgtccag
gtgatcatcacagaggcaggaaagcagccagactcccaccccattcagtggaaccctccc
tcatctgcgcacattacccagtacatcctcaaatggagaattaaaaataaccgtggacca
tggcgggaggtgaccatccccggccagcacaactcctacaccattggcgggctccgtcca
ggcatcacttacgagggtcagctgatcagcgttctgcgctacggaaaccgcgaggtcaca
cgcttcgatttcaccaccacccatggttctttggaaacatcggagggagagacgactgtg
cctcctcccgtgatggacacctctgagtctgtgacagaaatcacctcaaacagcttcgtt
gtgtcgtggacttcagcctctgctaccatctccggcttcagggtggagtatgagctcagt
gaggacggggctaagccaaaaattctggatattcctcgcacgtccaactctgtcaccatc
tctgaactcctgccaggacgcagatacaacgtcaatgtctacgagctcccagagtctgga
cagccaaacctcattctgaccacctcccagaccacagcccctgacagtgttgctcagcat
gtagtcgatgaggtgggagagtcctccatcagaatcagctggtccagacctcaggctcct
atcactggttaccgtgtggtgtacacgccgtcagtggagggcagcagcactgagctgacc
ttgacggactcagagacctcagtgaacctggtcgaccttcaccccggagtcctttacaac
attagcatctacgccatgaaggaggaccaggagagcgagcctgtgttcgtacaggttaac
actgcaggatctcctctaccagaggaggtcccggcacccacagacctgcagttttacgag
gttacagatgtgaagatcaccatcacctggaccggcccacccagtgaggtgacaggttac
agagtgacctactcccctgttggtcctgacggcactgagaccagacctctgccgctgccc
acctcacgcaacgcttacgccgatatcacccacctgcacccgggaaccctgtaccgcttc
tacatctatgccatcaacggtggcgtggagagcgagccgctggtgggagaaaggtcaacc
aagcctgattcgcccagcaatttgcatttcaccgacctcggccccgacagtgtgacagct
acttggaacgctcctcgtgccgtcgtcactggctaccgtctcttcctgagcattggggga
tccaacccgatcgagaagaggattccgggcagggtcacccagttcccactgaggaattta
cgcccagacacccagtacaccgccaccctccactctgagctagacaatgagctcagcgag
ggcatcactacatactttgccacaaccccacggatgggaaatgctcctcctttcagcacc
gaggtcactgatgcctccatcatcattacctggatacctgtccgcaggttcagctacaag
ctctctgttctaccaagccaggaaggcgagtctcccaaagaacaaacctcggactctgga
cgtatttttatccctgatctgatccctggaactcagtacacctacagcgttcagccaatc
tttaatgggcgcaaccaaggacaacccatcactcgcaacgctttcacctctctttctcct
cccactgacctcagagtccagtccagcccggacacaggagatctgattgtccattgggtc
gcctccacaacaccaggcatcacaggctacagagtgacaagcactccagtcaatggccag
cggggaaactccctggatgagctggttcgagctgatcaaacctcaatcaggctggagagc
ctgaaccctggagctgagtacaacatcagtgtgttcactaacaagggccatttggagagt
gtgcctgtgtctactatagtcacaccagtcattccagctccaaccaacctgcagtttaac
ggtgtgggtcctgaccacattagggtgacgtgggcagtcccccatgtggccacacctagc
gacatctcccgctttgtcatccgttaccaccctgctgcaaccgatgacgacatcagggag
gttaatgttggcggagcaacgaacacctttgtgctgcagaacctgctgcccaacacagag
taccgcatcagtgttgtatgtgtgtatggtgaacaagaaagtcaaccagccacaggaact
cagaggacaactctggactctcctactggcctggacttctcggacattcgcaccacctcc
ttcaccattcactggctggctccaactgctgccattaccggataccgtgttcgctaccag
gggacgagcggtgggagggccaaggatgagaggcttccccctaccagaacctactacact
ctgaccggactgacaccagagactgagtatttgatttatgtgtatgctgtcagcaacagt
caggagagtcagccgctgactggaacacaggccaccatctctgatgctcccactgacctg
gaagtaacatcgtccactcctaccagtatcaccattcgctgggacgcaccctctgtcaca
gtaaagaactacaagatcacctatgcaagcacaggtggtgagactcaggatttcacaatc
cctggcactcaaaccacagccaccatcaccggtctcaacccgggcaccgactacagcatc
ggagtcatcgctgtaagcggaaggggggacagcccgccctccaacaccccggtctacatc
agacacactactgacaccgagccccccactgacatgagattaaccgaagtcactgacaac
gccatcacagtgcgctggactcctgctcagggaccaattacaggctacagagtaaccagt
gtcccaaagaatggcctgggaccctcatactctgaggtggtggcccctgaccagacagag
attaccttcacaggtctcatgcccactgttgagtatgtaatcagtgtctacgctctggca
aatgatggacagccttcttcccctgtggtggataatgctatcactgccatggaccgtccc
aaagacctgaccttctctgacatcgactccacctccatgcgcatcacatgggacagtcca
gacggcacagtgacgtcatatcgcgtcttgtactccagcccagaggaggcggagagagat
ctgcgtccagcgccaagaggtgaccaggacagtgtgctgatcagaggccttcgccccggg
acagaatacaccgtgaaagtcatcgctctccatggccgcacacccagcaagccgctcgtg
ggaacccaggccacagtaatcccttcaccgactagcctgatgatctctgatgtcggcccc
tccaccttcactgtgtcatggcgagcccccaacgcaggcctgtcaggataccgtgtggtc
gtcattcccaagaccatcaacggcccgactaaagagttgaacgttgctccggacaccaca
cgtgttgtcgtaccaggactcatggtggccaccgcgtaccaggtgcatgtctatgctttg
aagaactccgtcaccagcagaccgctgacaggagaaatgaccacactggaagatgtgagt
actcctcggcgtgtgcgtgtctctgacgtaaaagactcctctttcacactgagctggcgc
tccaagttggaaacaatcactggttatctaatagaagctacaccagtcagtggctctaac
cccatcatcagcaagaacatcccagcggagaccaacacctacactctcacaggtctgcag
ccaggcaccatatactcaattagcctgtacactctgaatggcgtcacaaggagcccccca
tttactctcatgatccaaacagctgaaccagtggtccaggctcccaccagcctccagttc
acatctttgacccccacctccatcaccttcgcctggcagccacctgccacagagatcaca
ggatactacgtcacctacgaggagtcaggaagggggcctcgagagctgaccccgagaccc
cacgctggccaaaactacgccaccatatccggcctgaaaccagccacagagtacatcatt
aagattgttgccatccagaacacacagaggagcacacctctggttggaaaagtcaggact
aacccagactccctgctccccctgcctctgccccgccctggcggtgtaggcgacaagctg
gatgtgcctgaacctgacctggacaatacagtccaggtagtgggcaccaatggccaggat
gggcatggtggtcagagccagcatgtggagtacacagagtacaacaacaatggagacaac
aacaacaacagatataatgggaacagtggcaacccacagtatccctatgggcaagtacgt
gagcccctagtctttgtgccccttcctgatgcagagggccgcaggctgcccatcctgaag
ctgaactttcccatcggctccacctttggtaacgatactggagtgccacaggaggcccag
actcagacctctatctcctggaagccctacaagcagagcaacgcctacctggtgtcctgc
catcctctcacacaccaacatgagaaaatgttccaggtccgcctgccagacacagccacc
actgcaaccctgataggactcacccctggagccaactataatgtgattgtggaggctgtg
ttgggtgctctcaaacacaagattgtggagcaggtcatcacagctggaaacacaatccca
gggggagtttcctccagcaaggactcatgttacgatgccttcactgcaacccaccatgac
gtcggtgctgagtgggagcggatgtctgagaccggcttcaagctgtggtgcaggtgcctc
ggtctgggcagcggccacttcagatgtgactcatctaagtggtgccatgacaacggcatt
aactatcgcatcggagagaagtgggaccgccgcggagacaatggtcacctgatgagctgt
acttgtttgggaaacggaaaaggagaattcaagtgtgaaccacatgactcggtgtgttac
gatgatggcaaagcgtaccaggtgggaaaccagtggcaaaaggagtacctgggggccatc
tgcacctgcacatgctttggaggacagcagggctggcgatgtgagaactgccgcaaacca
ggtgctgaagtcgatgacagtctgcttcggcctgtaagatatggagacaactcactacat
aaactgaacattcattgccccattgagtgcctccgtcccgacctgctggcagacgccatc
gctcctccaaatcctcgggagtaa
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integrated database retrieval system
